RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 PRR15Q8IV56 129 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 TM2D3Q9BRN9 247 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 C8orf17Q9NRJ1 99 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 C19orf73Q9NVV2 129 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 M0R2T5 61 aa4.61□□□□□ -1.67
CHD2-208ENST00000626874 A8MUN3 132 aa4.6□□□□□ -1.67
CHD2-208ENST00000626874 CD164Q04900 197 aa4.6□□□□□ -1.67
CHD2-208ENST00000626874 COA5Q86WW8 74 aa4.6□□□□□ -1.67
CHD2-208ENST00000626874 LINC00528Q8N1L1 170 aa4.6□□□□□ -1.67
CHD2-208ENST00000626874 A0A096LNJ9 63 aa4.59□□□□□ -1.67
CHD2-208ENST00000626874 KLK9Q2XQG4 91 aa4.59□□□□□ -1.67
CHD2-208ENST00000626874 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.68
CHD2-208ENST00000626874 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
CHD2-208ENST00000626874 DSCR10P59022 87 aa4.58□□□□□ -1.68
CHD2-208ENST00000626874 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
CHD2-208ENST00000626874 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
CHD2-208ENST00000626874 C15orf56Q8N910 161 aa4.57□□□□□ -1.68
CHD2-208ENST00000626874 K7EQZ3 153 aa4.57□□□□□ -1.68
CHD2-208ENST00000626874 ZNF575Q86XF7 245 aa4.56□□□□□ -1.68
CHD2-208ENST00000626874 CR1P17927 2039 aa4.56□□□□□ -1.68
CHD2-208ENST00000626874 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
CHD2-208ENST00000626874 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
CHD2-208ENST00000626874 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
CHD2-208ENST00000626874 LINC00310P59036 64 aa4.55□□□□□ -1.68
CHD2-208ENST00000626874 EPG5Q9HCE0 2579 aa4.55□□□□□ -1.68
CHD2-208ENST00000626874 CSNK1G2-AS1Q8NCQ2 148 aa4.55□□□□□ -1.68
CHD2-208ENST00000626874 FAM168BA1KXE4 195 aa4.55□□□□□ -1.68
CHD2-208ENST00000626874 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
CHD2-208ENST00000626874 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
CHD2-208ENST00000626874 IGLV7-46A0A075B6I9 117 aa4.54□□□□□ -1.68
CHD2-208ENST00000626874 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
CHD2-208ENST00000626874 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
CHD2-208ENST00000626874 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
CHD2-208ENST00000626874 KRTAP10-11P60412 298 aa4.53□□□□□ -1.68
CHD2-208ENST00000626874 MGAM2Q2M2H8 2515 aa4.53□□□□□ -1.68
CHD2-208ENST00000626874 SEC61BP60468 96 aaKnown RBP4.53□□□□□ -1.68
CHD2-208ENST00000626874 FAM218AQ96MZ4 157 aa4.53□□□□□ -1.68
CHD2-208ENST00000626874 FLNBO75369 2602 aaKnown RBP4.52□□□□□ -1.69
CHD2-208ENST00000626874 IGLV5-48A0A075B6I7 105 aa4.51□□□□□ -1.69
CHD2-208ENST00000626874 MAST4O15021 2626 aa4.5□□□□□ -1.69
CHD2-208ENST00000626874 LINC00612Q8N6U2 182 aa4.5□□□□□ -1.69
CHD2-208ENST00000626874 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
CHD2-208ENST00000626874 Q8N377 158 aa4.48□□□□□ -1.69
CHD2-208ENST00000626874 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
CHD2-208ENST00000626874 Q1T7F1 81 aa4.47□□□□□ -1.69
CHD2-208ENST00000626874 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
CHD2-208ENST00000626874 HECTD1Q9ULT8 2610 aa4.47□□□□□ -1.69
CHD2-208ENST00000626874 BPTFQ12830 3046 aa4.46□□□□□ -1.69
CHD2-208ENST00000626874 CASC10Q5T4H9 136 aa4.46□□□□□ -1.7
CHD2-208ENST00000626874 A0A0D9SG42 100 aa4.46□□□□□ -1.7
CHD2-208ENST00000626874 OXTP01178 125 aa4.44□□□□□ -1.7
CHD2-208ENST00000626874 TNP2Q05952 138 aa4.44□□□□□ -1.7
CHD2-208ENST00000626874 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 LITAFQ99732 161 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 S4R3F8 94 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 LCA10Q71F78 164 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 PRO0461Q9UI25 63 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
CHD2-208ENST00000626874 ATRQ13535 2644 aa4.42□□□□□ -1.7
CHD2-208ENST00000626874 HELZ2Q9BYK8 2649 aaKnown RBP4.42□□□□□ -1.7
CHD2-208ENST00000626874 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
CHD2-208ENST00000626874 SMCPP49901 116 aaPredicted RBP4.42□□□□□ -1.7
CHD2-208ENST00000626874 A0A1B0GU33 70 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 Q8N1X5 172 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 H7BZZ5 65 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 A0A096LNT2 108 aa4.41□□□□□ -1.7
CHD2-208ENST00000626874 CFAP46Q8IYW2 2715 aa4.4□□□□□ -1.71
CHD2-208ENST00000626874 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
CHD2-208ENST00000626874 R4GN34 69 aa4.39□□□□□ -1.71
CHD2-208ENST00000626874 FP248Q71RG6 208 aaPredicted RBP4.39□□□□□ -1.71
CHD2-208ENST00000626874 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CHD2-208ENST00000626874 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
CHD2-208ENST00000626874 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
CHD2-208ENST00000626874 GIG44P09565 113 aaPredicted RBP4.38□□□□□ -1.71
CHD2-208ENST00000626874 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
CHD2-208ENST00000626874 WIPF1O43516 503 aa4.37□□□□□ -1.71
CHD2-208ENST00000626874 FLNAP21333 2647 aaKnown RBP4.37□□□□□ -1.71
CHD2-208ENST00000626874 KRTAP10-3P60369 221 aa4.36□□□□□ -1.71
CHD2-208ENST00000626874 ITPR3Q14573 2671 aa4.35□□□□□ -1.71
CHD2-208ENST00000626874 DMBT1Q9UGM3 2413 aaPredicted RBP4.33□□□□□ -1.72
CHD2-208ENST00000626874 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
CHD2-208ENST00000626874 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
CHD2-208ENST00000626874 Q5VSD8 79 aa4.33□□□□□ -1.72
CHD2-208ENST00000626874 LCE6AA0A183 80 aa4.32□□□□□ -1.72
CHD2-208ENST00000626874 NBEAL1Q6ZS30 2694 aa4.3□□□□□ -1.72
CHD2-208ENST00000626874 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
CHD2-208ENST00000626874 KMT2BQ9UMN6 2715 aaPredicted RBP4.3□□□□□ -1.72
CHD2-208ENST00000626874 PRRC2CQ9Y520 2896 aaKnown RBP4.28□□□□□ -1.72
CHD2-208ENST00000626874 Q75L30 129 aa4.28□□□□□ -1.72
CHD2-208ENST00000626874 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
CHD2-208ENST00000626874 SPINK7P58062 85 aa4.27□□□□□ -1.73
CHD2-208ENST00000626874 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
CHD2-208ENST00000626874 EP400Q96L91 3159 aa4.25□□□□□ -1.73
CHD2-208ENST00000626874 AKAP13Q12802 2813 aa4.25□□□□□ -1.73
CHD2-208ENST00000626874 A0A0G2JQZ4 141 aa4.25□□□□□ -1.73
CHD2-208ENST00000626874 SPRR1BP22528 89 aa4.25□□□□□ -1.73
CHD2-208ENST00000626874 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms