RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ATOX1O00244 68 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
LINC00538-201ENST00000626109 MIR7-3HGQ8N6C7 128 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 IGLV4-60A0A075B6I1 120 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
LINC00538-201ENST00000626109 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
LINC00538-201ENST00000626109 H0YGX0 51 aa7.79□□□□□ -1.16
LINC00538-201ENST00000626109 S100A7L2Q5SY68 101 aa7.79□□□□□ -1.16
LINC00538-201ENST00000626109 A0A1B0GUV1 79 aa7.78□□□□□ -1.16
LINC00538-201ENST00000626109 MUC7Q8TAX7 377 aa7.78□□□□□ -1.16
LINC00538-201ENST00000626109 STAB2Q8WWQ8 2551 aa7.78□□□□□ -1.16
LINC00538-201ENST00000626109 LINC00959A0A1B0GUT2 108 aa7.78□□□□□ -1.16
LINC00538-201ENST00000626109 DNAL4O96015 105 aa7.78□□□□□ -1.16
LINC00538-201ENST00000626109 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
LINC00538-201ENST00000626109 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
LINC00538-201ENST00000626109 H3BNG1 76 aa7.76□□□□□ -1.17
LINC00538-201ENST00000626109 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
LINC00538-201ENST00000626109 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
LINC00538-201ENST00000626109 CCL18P55774 89 aa7.75□□□□□ -1.17
LINC00538-201ENST00000626109 IGKV2-28A0A075B6P5 120 aa7.74□□□□□ -1.17
LINC00538-201ENST00000626109 IGKV2D-28P01615 120 aa7.74□□□□□ -1.17
LINC00538-201ENST00000626109 Q8IZM0 81 aa7.74□□□□□ -1.17
LINC00538-201ENST00000626109 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
LINC00538-201ENST00000626109 SMIM11BQ8TCY0 68 aa7.73□□□□□ -1.17
LINC00538-201ENST00000626109 LINC00476Q8WZB0 136 aa7.73□□□□□ -1.17
LINC00538-201ENST00000626109 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
LINC00538-201ENST00000626109 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
LINC00538-201ENST00000626109 C3orf84H3BNL1 204 aa7.72□□□□□ -1.17
LINC00538-201ENST00000626109 XCL1P47992 114 aa7.72□□□□□ -1.17
LINC00538-201ENST00000626109 A0A096LPF7 62 aa7.71□□□□□ -1.18
LINC00538-201ENST00000626109 A6NN06 94 aa7.71□□□□□ -1.18
LINC00538-201ENST00000626109 CCKP06307 115 aa7.71□□□□□ -1.18
LINC00538-201ENST00000626109 COX17Q14061 63 aa7.71□□□□□ -1.18
LINC00538-201ENST00000626109 TGP01266 2768 aa7.71□□□□□ -1.18
LINC00538-201ENST00000626109 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
LINC00538-201ENST00000626109 SERP2Q8N6R1 65 aa7.7□□□□□ -1.18
LINC00538-201ENST00000626109 RMI2Q96E14 147 aa7.7□□□□□ -1.18
LINC00538-201ENST00000626109 APLNQ9ULZ1 77 aa7.7□□□□□ -1.18
LINC00538-201ENST00000626109 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
LINC00538-201ENST00000626109 CASC10Q5T4H9 136 aa7.69□□□□□ -1.18
LINC00538-201ENST00000626109 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
LINC00538-201ENST00000626109 PRR4Q16378 134 aa7.68□□□□□ -1.18
LINC00538-201ENST00000626109 A0A087WYN8 130 aa7.68□□□□□ -1.18
LINC00538-201ENST00000626109 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
LINC00538-201ENST00000626109 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
LINC00538-201ENST00000626109 KRTAP4-16G5E9R7 235 aaPredicted RBP7.66□□□□□ -1.18
LINC00538-201ENST00000626109 LECT2O14960 151 aa7.66□□□□□ -1.18
LINC00538-201ENST00000626109 LINC00269Q8N2A0 174 aa7.66□□□□□ -1.18
LINC00538-201ENST00000626109 ORMDL1Q9P0S3 153 aa7.66□□□□□ -1.18
LINC00538-201ENST00000626109 ANGP03950 147 aaKnown RBP7.66□□□□□ -1.18
LINC00538-201ENST00000626109 C10orf25Q5T742 122 aa7.66□□□□□ -1.18
LINC00538-201ENST00000626109 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
LINC00538-201ENST00000626109 ESRGQ1W209 222 aa7.65□□□□□ -1.18
LINC00538-201ENST00000626109 CLPSL2Q6UWE3 100 aa7.65□□□□□ -1.18
LINC00538-201ENST00000626109 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
LINC00538-201ENST00000626109 OBSCN-AS1Q96MR7 158 aa7.65□□□□□ -1.18
LINC00538-201ENST00000626109 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
LINC00538-201ENST00000626109 LELP1Q5T871 98 aa7.64□□□□□ -1.19
LINC00538-201ENST00000626109 MPLKIPQ8TAP9 179 aa7.64□□□□□ -1.19
LINC00538-201ENST00000626109 SMCR5Q8TEV8 140 aa7.64□□□□□ -1.19
LINC00538-201ENST00000626109 A0A1B0GW54 56 aa7.62□□□□□ -1.19
LINC00538-201ENST00000626109 JMJD7-PLA2G4BH0Y9G9 81 aa7.62□□□□□ -1.19
LINC00538-201ENST00000626109 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
LINC00538-201ENST00000626109 C14orf132Q9NPU4 83 aa7.62□□□□□ -1.19
LINC00538-201ENST00000626109 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
LINC00538-201ENST00000626109 Q8N814 137 aa7.6□□□□□ -1.19
LINC00538-201ENST00000626109 DNAH7Q8WXX0 4024 aa7.6□□□□□ -1.19
LINC00538-201ENST00000626109 IGLV10-54A0A075B6I4 117 aa7.6□□□□□ -1.19
LINC00538-201ENST00000626109 LUZP6Q538Z0 58 aa7.6□□□□□ -1.19
LINC00538-201ENST00000626109 WFDC10BQ8IUB3 73 aa7.59□□□□□ -1.19
LINC00538-201ENST00000626109 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
LINC00538-201ENST00000626109 SLPIP03973 132 aa7.58□□□□□ -1.2
LINC00538-201ENST00000626109 H3BQ85 93 aa7.58□□□□□ -1.2
LINC00538-201ENST00000626109 NCR3O14931 201 aa7.58□□□□□ -1.2
LINC00538-201ENST00000626109 LY6G6CO95867 125 aa7.58□□□□□ -1.2
LINC00538-201ENST00000626109 Q6JHZ5 121 aa7.58□□□□□ -1.2
LINC00538-201ENST00000626109 SPAG11BQ08648 103 aa7.57□□□□□ -1.2
LINC00538-201ENST00000626109 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
LINC00538-201ENST00000626109 DYNC2H1Q8NCM8 4307 aaKnown RBP7.56□□□□□ -1.2
LINC00538-201ENST00000626109 A6NED7 52 aa7.56□□□□□ -1.2
LINC00538-201ENST00000626109 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
LINC00538-201ENST00000626109 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
LINC00538-201ENST00000626109 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
LINC00538-201ENST00000626109 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
LINC00538-201ENST00000626109 STARD9Q9P2P6 4700 aa7.55□□□□□ -1.2
LINC00538-201ENST00000626109 DNAH10OSP0CZ25 163 aa7.55□□□□□ -1.2
LINC00538-201ENST00000626109 C9orf116Q5BN46 136 aaPredicted RBP7.55□□□□□ -1.2
LINC00538-201ENST00000626109 LINC01556Q5JQF7 62 aa7.55□□□□□ -1.2
LINC00538-201ENST00000626109 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
LINC00538-201ENST00000626109 GVQW2A0A096LPI5 108 aaPredicted RBP7.54□□□□□ -1.2
LINC00538-201ENST00000626109 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
LINC00538-201ENST00000626109 UNQ6190/PRO20217Q6UXQ8 127 aa7.54□□□□□ -1.2
LINC00538-201ENST00000626109 LINC00575Q6W349 94 aa7.54□□□□□ -1.2
LINC00538-201ENST00000626109 KLK12Q9UKR0 248 aa7.54□□□□□ -1.2
LINC00538-201ENST00000626109 Q1T7F1 81 aa7.53□□□□□ -1.2
LINC00538-201ENST00000626109 ATP5EP2Q5VTU8 51 aa7.53□□□□□ -1.2
LINC00538-201ENST00000626109 Q8N3U1 123 aa7.53□□□□□ -1.2
LINC00538-201ENST00000626109 LCE6AA0A183 80 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms