RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 BVES-AS1Q5T3Y7 98 aa12.24□□□□□ -0.45
PDLIM2-221ENST00000622702 CBY1Q9Y3M2 126 aa12.24□□□□□ -0.45
PDLIM2-221ENST00000622702 M0R143 59 aa12.23□□□□□ -0.45
PDLIM2-221ENST00000622702 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
PDLIM2-221ENST00000622702 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.45
PDLIM2-221ENST00000622702 SPRR1AP35321 89 aa12.21□□□□□ -0.45
PDLIM2-221ENST00000622702 A0A1B0GWB2 263 aa12.21□□□□□ -0.46
PDLIM2-221ENST00000622702 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.46
PDLIM2-221ENST00000622702 C1orf137Q5JT78 98 aa12.21□□□□□ -0.46
PDLIM2-221ENST00000622702 RAB37Q96AX2 223 aa12.21□□□□□ -0.46
PDLIM2-221ENST00000622702 BCE1O60756 84 aa12.2□□□□□ -0.46
PDLIM2-221ENST00000622702 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-221ENST00000622702 RPL13AP40429 203 aaKnown RBP12.19□□□□□ -0.46
PDLIM2-221ENST00000622702 PRO1854Q9UHT4 67 aa12.18□□□□□ -0.46
PDLIM2-221ENST00000622702 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
PDLIM2-221ENST00000622702 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
PDLIM2-221ENST00000622702 MYCBP2O75592 4640 aa12.16□□□□□ -0.46
PDLIM2-221ENST00000622702 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
PDLIM2-221ENST00000622702 IGLV7-43P04211 117 aa12.15□□□□□ -0.46
PDLIM2-221ENST00000622702 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
PDLIM2-221ENST00000622702 K7ERJ3 54 aa12.14□□□□□ -0.47
PDLIM2-221ENST00000622702 DIRC1Q969H9 104 aa12.14□□□□□ -0.47
PDLIM2-221ENST00000622702 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-221ENST00000622702 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
PDLIM2-221ENST00000622702 C6orf99Q4VX62 202 aa12.13□□□□□ -0.47
PDLIM2-221ENST00000622702 FAM19A1Q7Z5A9 133 aa12.13□□□□□ -0.47
PDLIM2-221ENST00000622702 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
PDLIM2-221ENST00000622702 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-221ENST00000622702 B5MCH6 92 aa12.11□□□□□ -0.47
PDLIM2-221ENST00000622702 H0Y9J4 135 aa12.11□□□□□ -0.47
PDLIM2-221ENST00000622702 TRBV7-6A0A0J9YX20 115 aa12.1□□□□□ -0.47
PDLIM2-221ENST00000622702 PCP4L1A6NKN8 68 aa12.1□□□□□ -0.47
PDLIM2-221ENST00000622702 H7C2G1 150 aa12.1□□□□□ -0.47
PDLIM2-221ENST00000622702 ZNF861PO60384 105 aa12.1□□□□□ -0.47
PDLIM2-221ENST00000622702 UBE2AP49459 152 aa12.1□□□□□ -0.47
PDLIM2-221ENST00000622702 PRLHP81277 87 aa12.09□□□□□ -0.47
PDLIM2-221ENST00000622702 Q6ZRX8 168 aa12.08□□□□□ -0.47
PDLIM2-221ENST00000622702 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-221ENST00000622702 BATFQ16520 125 aa12.08□□□□□ -0.48
PDLIM2-221ENST00000622702 Q1RN00 199 aa12.08□□□□□ -0.48
PDLIM2-221ENST00000622702 COX7BP24311 80 aa12.06□□□□□ -0.48
PDLIM2-221ENST00000622702 TSPAN13O95857 204 aa12.05□□□□□ -0.48
PDLIM2-221ENST00000622702 VAMP3Q15836 100 aa12.04□□□□□ -0.48
PDLIM2-221ENST00000622702 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
PDLIM2-221ENST00000622702 SNHG12Q9BXW3 62 aa12.04□□□□□ -0.48
PDLIM2-221ENST00000622702 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
PDLIM2-221ENST00000622702 FAT3Q8TDW7 4589 aa12.03□□□□□ -0.48
PDLIM2-221ENST00000622702 Q9BRP9 147 aa12.02□□□□□ -0.48
PDLIM2-221ENST00000622702 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.49
PDLIM2-221ENST00000622702 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
PDLIM2-221ENST00000622702 TRIAP1O43715 76 aa12□□□□□ -0.49
PDLIM2-221ENST00000622702 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
PDLIM2-221ENST00000622702 H0YGX0 51 aa11.98□□□□□ -0.49
PDLIM2-221ENST00000622702 PSMB2P49721 201 aa11.98□□□□□ -0.49
PDLIM2-221ENST00000622702 KRTAP29-1A8MX34 341 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-221ENST00000622702 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
PDLIM2-221ENST00000622702 LINC00575Q6W349 94 aa11.96□□□□□ -0.49
PDLIM2-221ENST00000622702 COX6CP09669 75 aa11.95□□□□□ -0.5
PDLIM2-221ENST00000622702 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-221ENST00000622702 J3QL48 77 aa11.95□□□□□ -0.5
PDLIM2-221ENST00000622702 OXTP01178 125 aa11.95□□□□□ -0.5
PDLIM2-221ENST00000622702 TAX1BP3O14907 124 aa11.94□□□□□ -0.5
PDLIM2-221ENST00000622702 SLC25A20O43772 301 aa11.94□□□□□ -0.5
PDLIM2-221ENST00000622702 COL5A1-AS1Q5SY13 56 aa11.94□□□□□ -0.5
PDLIM2-221ENST00000622702 hADV29S1A0JD25 119 aa11.91□□□□□ -0.5
PDLIM2-221ENST00000622702 C9orf118A6NHY6 69 aa11.9□□□□□ -0.5
PDLIM2-221ENST00000622702 FAM218AQ96MZ4 157 aa11.9□□□□□ -0.5
PDLIM2-221ENST00000622702 NAA38Q9BRA0 125 aaKnown RBP11.9□□□□□ -0.5
PDLIM2-221ENST00000622702 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-221ENST00000622702 HERC1Q15751 4861 aa11.9□□□□□ -0.51
PDLIM2-221ENST00000622702 SPRR4Q96PI1 79 aa11.89□□□□□ -0.51
PDLIM2-221ENST00000622702 A0A1B0GX51 115 aa11.89□□□□□ -0.51
PDLIM2-221ENST00000622702 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
PDLIM2-221ENST00000622702 H3BUT2 72 aa11.88□□□□□ -0.51
PDLIM2-221ENST00000622702 SNCGO76070 127 aa11.88□□□□□ -0.51
PDLIM2-221ENST00000622702 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
PDLIM2-221ENST00000622702 CLEC2BQ92478 149 aa11.88□□□□□ -0.51
PDLIM2-221ENST00000622702 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
PDLIM2-221ENST00000622702 LYRM7Q5U5X0 104 aa11.85□□□□□ -0.51
PDLIM2-221ENST00000622702 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
PDLIM2-221ENST00000622702 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.84□□□□□ -0.51
PDLIM2-221ENST00000622702 Q6ZQY7 126 aa11.83□□□□□ -0.52
PDLIM2-221ENST00000622702 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.52
PDLIM2-221ENST00000622702 LST1O00453 97 aa11.83□□□□□ -0.52
PDLIM2-221ENST00000622702 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.52
PDLIM2-221ENST00000622702 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
PDLIM2-221ENST00000622702 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
PDLIM2-221ENST00000622702 SPRR1BP22528 89 aa11.82□□□□□ -0.52
PDLIM2-221ENST00000622702 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-221ENST00000622702 TRACP01848 142 aa11.81□□□□□ -0.52
PDLIM2-221ENST00000622702 FAM229BQ4G0N7 80 aa11.81□□□□□ -0.52
PDLIM2-221ENST00000622702 ANAPC11Q9NYG5 84 aa11.8□□□□□ -0.52
PDLIM2-221ENST00000622702 TNXBP22105 4242 aa11.8□□□□□ -0.52
PDLIM2-221ENST00000622702 TEX49A0A1B0GTD5 131 aa11.79□□□□□ -0.52
PDLIM2-221ENST00000622702 TCL1BO95988 128 aa11.79□□□□□ -0.52
PDLIM2-221ENST00000622702 MT1HL1P0DM35 61 aa11.79□□□□□ -0.52
PDLIM2-221ENST00000622702 TRBV20-1A0A075B6N2 111 aa11.78□□□□□ -0.52
PDLIM2-221ENST00000622702 FABP2P12104 132 aa11.78□□□□□ -0.52
PDLIM2-221ENST00000622702 OCIAD2Q56VL3 154 aa11.78□□□□□ -0.52
PDLIM2-221ENST00000622702 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms