RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SEC61GP60059 68 aa6.28□□□□□ -1.4
GGA3-223ENST00000621870 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
GGA3-223ENST00000621870 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
GGA3-223ENST00000621870 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
GGA3-223ENST00000621870 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
GGA3-223ENST00000621870 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
GGA3-223ENST00000621870 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
GGA3-223ENST00000621870 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 Q6JHZ5 121 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 NF1P21359 2839 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 PRR4Q16378 134 aa6.26□□□□□ -1.41
GGA3-223ENST00000621870 IGLV5-45A0A087WSX0 123 aa6.24□□□□□ -1.41
GGA3-223ENST00000621870 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 FAM30AQ9NZY2 134 aa6.23□□□□□ -1.41
GGA3-223ENST00000621870 MOBPQ13875 183 aa6.22□□□□□ -1.41
GGA3-223ENST00000621870 LINC01547P58512 204 aaPredicted RBP6.22□□□□□ -1.41
GGA3-223ENST00000621870 KIAA0087Q14695 138 aa6.22□□□□□ -1.41
GGA3-223ENST00000621870 Q6Q795 121 aa6.22□□□□□ -1.41
GGA3-223ENST00000621870 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
GGA3-223ENST00000621870 CR1P17927 2039 aa6.21□□□□□ -1.42
GGA3-223ENST00000621870 Q6ZRP5 223 aa6.21□□□□□ -1.42
GGA3-223ENST00000621870 Q8N9L7 120 aa6.21□□□□□ -1.42
GGA3-223ENST00000621870 SNURFQ9Y675 71 aa6.21□□□□□ -1.42
GGA3-223ENST00000621870 A0A087WVE0 104 aa6.2□□□□□ -1.42
GGA3-223ENST00000621870 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
GGA3-223ENST00000621870 UQCRQO14949 82 aa6.2□□□□□ -1.42
GGA3-223ENST00000621870 CRYGAP11844 174 aa6.18□□□□□ -1.42
GGA3-223ENST00000621870 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
GGA3-223ENST00000621870 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
GGA3-223ENST00000621870 EPM2AB3EWF7 344 aa6.17□□□□□ -1.42
GGA3-223ENST00000621870 IMUPQ9GZP8 106 aa6.17□□□□□ -1.42
GGA3-223ENST00000621870 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
GGA3-223ENST00000621870 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
GGA3-223ENST00000621870 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
GGA3-223ENST00000621870 Q6ZVQ6 151 aa6.16□□□□□ -1.42
GGA3-223ENST00000621870 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
GGA3-223ENST00000621870 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
GGA3-223ENST00000621870 SERP2Q8N6R1 65 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 PRR34Q9NV39 138 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 LINC00846Q9NV44 126 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 FBN2P35556 2912 aa6.15□□□□□ -1.42
GGA3-223ENST00000621870 HRNRQ86YZ3 2850 aaPredicted RBP6.15□□□□□ -1.42
GGA3-223ENST00000621870 Q6ZRX8 168 aa6.15□□□□□ -1.43
GGA3-223ENST00000621870 ST20-AS1Q8NBB2 130 aa6.15□□□□□ -1.43
GGA3-223ENST00000621870 A0A087WTM6 91 aa6.14□□□□□ -1.43
GGA3-223ENST00000621870 VPREB1P12018 145 aa6.14□□□□□ -1.43
GGA3-223ENST00000621870 FAM218AQ96MZ4 157 aa6.14□□□□□ -1.43
GGA3-223ENST00000621870 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
GGA3-223ENST00000621870 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
GGA3-223ENST00000621870 MPLKIPQ8TAP9 179 aa6.13□□□□□ -1.43
GGA3-223ENST00000621870 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
GGA3-223ENST00000621870 J3QL48 77 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 ZFHX3Q15911 3703 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 BCE1O60756 84 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 COX7CP15954 63 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 CASC10Q5T4H9 136 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 C15orf56Q8N910 161 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 APLNQ9ULZ1 77 aa6.12□□□□□ -1.43
GGA3-223ENST00000621870 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
GGA3-223ENST00000621870 RPL37AP61513 92 aaKnown RBP6.11□□□□□ -1.43
GGA3-223ENST00000621870 LINC00476Q8WZB0 136 aa6.11□□□□□ -1.43
GGA3-223ENST00000621870 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
GGA3-223ENST00000621870 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
GGA3-223ENST00000621870 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
GGA3-223ENST00000621870 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
GGA3-223ENST00000621870 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
GGA3-223ENST00000621870 HCG22E2RYF7 251 aa6.09□□□□□ -1.43
GGA3-223ENST00000621870 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
GGA3-223ENST00000621870 TRBV7-7A0A0K0K1E9 115 aa6.09□□□□□ -1.43
GGA3-223ENST00000621870 SPINK1P00995 79 aa6.09□□□□□ -1.43
GGA3-223ENST00000621870 CELSR1Q9NYQ6 3014 aa6.08□□□□□ -1.44
GGA3-223ENST00000621870 CSMD1Q96PZ7 3565 aa6.08□□□□□ -1.44
GGA3-223ENST00000621870 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
GGA3-223ENST00000621870 Q8NBF4 154 aa6.07□□□□□ -1.44
GGA3-223ENST00000621870 LITAFQ99732 161 aa6.07□□□□□ -1.44
GGA3-223ENST00000621870 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
GGA3-223ENST00000621870 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
GGA3-223ENST00000621870 NDUFC1O43677 76 aa6.06□□□□□ -1.44
GGA3-223ENST00000621870 IGLV6-57P01721 117 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 H0Y9P7 68 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 TNP2Q05952 138 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 TENM3Q9P273 2699 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
GGA3-223ENST00000621870 CUBNO60494 3623 aa6.04□□□□□ -1.44
GGA3-223ENST00000621870 WIPF1O43516 503 aa6.04□□□□□ -1.44
GGA3-223ENST00000621870 SVEP1Q4LDE5 3571 aa6.04□□□□□ -1.44
GGA3-223ENST00000621870 NBPF19A0A087WUL8 3843 aa6.04□□□□□ -1.44
GGA3-223ENST00000621870 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
GGA3-223ENST00000621870 ANAPC11Q9NYG5 84 aa6.04□□□□□ -1.44
GGA3-223ENST00000621870 CSMD2Q7Z408 3487 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms