RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
LITAF-220ENST00000620789 LINC00518Q8N0U6 118 aa10.91□□□□□ -0.66
LITAF-220ENST00000620789 MUSTN1Q8IVN3 82 aa10.9□□□□□ -0.66
LITAF-220ENST00000620789 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
LITAF-220ENST00000620789 RPL13AP40429 203 aaKnown RBP10.89□□□□□ -0.67
LITAF-220ENST00000620789 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
LITAF-220ENST00000620789 B5MCH6 92 aa10.88□□□□□ -0.67
LITAF-220ENST00000620789 COX8AP10176 69 aa10.88□□□□□ -0.67
LITAF-220ENST00000620789 ZNF73O43830 326 aaPredicted RBP10.87□□□□□ -0.67
LITAF-220ENST00000620789 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
LITAF-220ENST00000620789 PAM16Q9Y3D7 125 aa10.87□□□□□ -0.67
LITAF-220ENST00000620789 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
LITAF-220ENST00000620789 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
LITAF-220ENST00000620789 A0A087X002 238 aa10.85□□□□□ -0.67
LITAF-220ENST00000620789 DLEU1O43261 78 aa10.85□□□□□ -0.67
LITAF-220ENST00000620789 Q6ZRX8 168 aa10.85□□□□□ -0.67
LITAF-220ENST00000620789 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
LITAF-220ENST00000620789 CRYGAP11844 174 aa10.84□□□□□ -0.67
LITAF-220ENST00000620789 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
LITAF-220ENST00000620789 C14orf144Q96I85 54 aa10.83□□□□□ -0.68
LITAF-220ENST00000620789 PYY3Q5JQD4 70 aa10.82□□□□□ -0.68
LITAF-220ENST00000620789 SPRR4Q96PI1 79 aa10.82□□□□□ -0.68
LITAF-220ENST00000620789 Q9BRP9 147 aa10.82□□□□□ -0.68
LITAF-220ENST00000620789 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
LITAF-220ENST00000620789 HMCN2Q8NDA2 5059 aa10.81□□□□□ -0.68
LITAF-220ENST00000620789 HINT1P49773 126 aaPredicted RBP10.81□□□□□ -0.68
LITAF-220ENST00000620789 A6NDN8 102 aa10.8□□□□□ -0.68
LITAF-220ENST00000620789 KRTAP13-2Q52LG2 175 aa10.79□□□□□ -0.68
LITAF-220ENST00000620789 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
LITAF-220ENST00000620789 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
LITAF-220ENST00000620789 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
LITAF-220ENST00000620789 ERC2-IT1O76042 136 aa10.78□□□□□ -0.68
LITAF-220ENST00000620789 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
LITAF-220ENST00000620789 A4D1N5 150 aa10.77□□□□□ -0.69
LITAF-220ENST00000620789 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
LITAF-220ENST00000620789 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
LITAF-220ENST00000620789 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
LITAF-220ENST00000620789 COX7BP24311 80 aa10.74□□□□□ -0.69
LITAF-220ENST00000620789 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
LITAF-220ENST00000620789 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
LITAF-220ENST00000620789 LINC00483Q53H64 154 aa10.73□□□□□ -0.69
LITAF-220ENST00000620789 GAGE2AQ6NT46 116 aa10.72□□□□□ -0.69
LITAF-220ENST00000620789 DHRS4-AS1Q9P1J3 65 aa10.72□□□□□ -0.69
LITAF-220ENST00000620789 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
LITAF-220ENST00000620789 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
LITAF-220ENST00000620789 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
LITAF-220ENST00000620789 C12orf57Q99622 126 aa10.69□□□□□ -0.7
LITAF-220ENST00000620789 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
LITAF-220ENST00000620789 TAL2Q16559 108 aa10.67□□□□□ -0.7
LITAF-220ENST00000620789 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
LITAF-220ENST00000620789 CEND1Q8N111 149 aa10.64□□□□□ -0.71
LITAF-220ENST00000620789 TSPAN13O95857 204 aa10.63□□□□□ -0.71
LITAF-220ENST00000620789 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
LITAF-220ENST00000620789 CFC1P0CG37 223 aa10.63□□□□□ -0.71
LITAF-220ENST00000620789 IGLV9-49A0A0B4J1Y8 123 aa10.62□□□□□ -0.71
LITAF-220ENST00000620789 VAMP3Q15836 100 aa10.62□□□□□ -0.71
LITAF-220ENST00000620789 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
LITAF-220ENST00000620789 SPRR1BP22528 89 aa10.61□□□□□ -0.71
LITAF-220ENST00000620789 RAB37Q96AX2 223 aa10.61□□□□□ -0.71
LITAF-220ENST00000620789 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
LITAF-220ENST00000620789 MOBPQ13875 183 aa10.6□□□□□ -0.71
LITAF-220ENST00000620789 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
LITAF-220ENST00000620789 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
LITAF-220ENST00000620789 A6NJY4 79 aa10.59□□□□□ -0.71
LITAF-220ENST00000620789 Q8NBF4 154 aa10.59□□□□□ -0.71
LITAF-220ENST00000620789 FXYD2P54710 66 aa10.58□□□□□ -0.72
LITAF-220ENST00000620789 CTAG1AP78358 180 aa10.58□□□□□ -0.72
LITAF-220ENST00000620789 HSD52Q0P140 79 aa10.58□□□□□ -0.72
LITAF-220ENST00000620789 SPAG11AQ6PDA7 123 aa10.58□□□□□ -0.72
LITAF-220ENST00000620789 H7C2G1 150 aa10.57□□□□□ -0.72
LITAF-220ENST00000620789 SLC25A20O43772 301 aa10.57□□□□□ -0.72
LITAF-220ENST00000620789 SSBP3-AS1Q7Z2R9 100 aa10.57□□□□□ -0.72
LITAF-220ENST00000620789 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
LITAF-220ENST00000620789 LINC00575Q6W349 94 aa10.56□□□□□ -0.72
LITAF-220ENST00000620789 DEFB105AQ8NG35 78 aa10.56□□□□□ -0.72
LITAF-220ENST00000620789 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
LITAF-220ENST00000620789 C4orf48Q5BLP8 95 aa10.55□□□□□ -0.72
LITAF-220ENST00000620789 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
LITAF-220ENST00000620789 IGLV5-48A0A075B6I7 105 aa10.54□□□□□ -0.72
LITAF-220ENST00000620789 SMIM6P0DI80 62 aa10.54□□□□□ -0.72
LITAF-220ENST00000620789 LINC01547P58512 204 aaPredicted RBP10.54□□□□□ -0.72
LITAF-220ENST00000620789 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
LITAF-220ENST00000620789 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
LITAF-220ENST00000620789 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
LITAF-220ENST00000620789 PRR4Q16378 134 aa10.52□□□□□ -0.73
LITAF-220ENST00000620789 LRP2P98164 4655 aa10.52□□□□□ -0.73
LITAF-220ENST00000620789 SPINK1P00995 79 aa10.5□□□□□ -0.73
LITAF-220ENST00000620789 Q1RN00 199 aa10.5□□□□□ -0.73
LITAF-220ENST00000620789 PRO1933Q9H354 126 aa10.5□□□□□ -0.73
LITAF-220ENST00000620789 UBR4Q5T4S7 5183 aa10.49□□□□□ -0.73
LITAF-220ENST00000620789 Q6ZQY7 126 aa10.49□□□□□ -0.73
LITAF-220ENST00000620789 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
LITAF-220ENST00000620789 Q8N377 158 aa10.48□□□□□ -0.73
LITAF-220ENST00000620789 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
LITAF-220ENST00000620789 H0YGX0 51 aa10.47□□□□□ -0.73
LITAF-220ENST00000620789 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
LITAF-220ENST00000620789 K7ERJ3 54 aa10.45□□□□□ -0.74
LITAF-220ENST00000620789 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
LITAF-220ENST00000620789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
LITAF-220ENST00000620789 LPAP08519 4548 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms