RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 Q6ZRX8 168 aa8.87□□□□□ -0.99
COL1A2-213ENST00000620463 ATRQ13535 2644 aa8.87□□□□□ -0.99
COL1A2-213ENST00000620463 COL27A1Q8IZC6 1860 aaPredicted RBP8.86□□□□□ -0.99
COL1A2-213ENST00000620463 HELZ2Q9BYK8 2649 aaKnown RBP8.85□□□□□ -0.99
COL1A2-213ENST00000620463 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
COL1A2-213ENST00000620463 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
COL1A2-213ENST00000620463 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
COL1A2-213ENST00000620463 C16orf95Q9H693 158 aa8.83□□□□□ -1
COL1A2-213ENST00000620463 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
COL1A2-213ENST00000620463 MGAQ8IWI9 3026 aa8.82□□□□□ -1
COL1A2-213ENST00000620463 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
COL1A2-213ENST00000620463 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
COL1A2-213ENST00000620463 H3BS24 57 aa8.81□□□□□ -1
COL1A2-213ENST00000620463 CFAP46Q8IYW2 2715 aa8.8□□□□□ -1
COL1A2-213ENST00000620463 EPM2AB3EWF7 344 aa8.8□□□□□ -1
COL1A2-213ENST00000620463 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
COL1A2-213ENST00000620463 IGKV2-30P06310 120 aa8.79□□□□□ -1
COL1A2-213ENST00000620463 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
COL1A2-213ENST00000620463 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
COL1A2-213ENST00000620463 UQCR11O14957 56 aa8.78□□□□□ -1
COL1A2-213ENST00000620463 LAMA1P25391 3075 aa8.78□□□□□ -1
COL1A2-213ENST00000620463 Q6ZRP5 223 aa8.77□□□□□ -1.01
COL1A2-213ENST00000620463 A8MWP4 228 aa8.76□□□□□ -1.01
COL1A2-213ENST00000620463 Q8N377 158 aa8.76□□□□□ -1.01
COL1A2-213ENST00000620463 X6R8D5 127 aa8.75□□□□□ -1.01
COL1A2-213ENST00000620463 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
COL1A2-213ENST00000620463 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
COL1A2-213ENST00000620463 ZNF292O60281 2723 aa8.73□□□□□ -1.01
COL1A2-213ENST00000620463 MIR22HGQ0VDD5 57 aa8.73□□□□□ -1.01
COL1A2-213ENST00000620463 VCANP13611 3396 aa8.73□□□□□ -1.01
COL1A2-213ENST00000620463 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
COL1A2-213ENST00000620463 A0A096LNT2 108 aa8.72□□□□□ -1.01
COL1A2-213ENST00000620463 A0A1W2PNM2 257 aa8.71□□□□□ -1.01
COL1A2-213ENST00000620463 MOBPQ13875 183 aa8.71□□□□□ -1.01
COL1A2-213ENST00000620463 DNAH14Q0VDD8 3507 aa8.71□□□□□ -1.02
COL1A2-213ENST00000620463 A0A0G2JQZ4 141 aa8.71□□□□□ -1.02
COL1A2-213ENST00000620463 A0A1W2PNN7 141 aa8.71□□□□□ -1.02
COL1A2-213ENST00000620463 LINC01556Q5JQF7 62 aa8.71□□□□□ -1.02
COL1A2-213ENST00000620463 KCNQ1DNQ9H478 68 aa8.7□□□□□ -1.02
COL1A2-213ENST00000620463 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
COL1A2-213ENST00000620463 CELSR3Q9NYQ7 3312 aa8.69□□□□□ -1.02
COL1A2-213ENST00000620463 COL6A3P12111 3177 aa8.68□□□□□ -1.02
COL1A2-213ENST00000620463 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
COL1A2-213ENST00000620463 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
COL1A2-213ENST00000620463 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
COL1A2-213ENST00000620463 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
COL1A2-213ENST00000620463 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
COL1A2-213ENST00000620463 Q8N9P0 234 aaPredicted RBP8.67□□□□□ -1.02
COL1A2-213ENST00000620463 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
COL1A2-213ENST00000620463 TEP1Q99973 2627 aaKnown RBP8.66□□□□□ -1.02
COL1A2-213ENST00000620463 Q75L30 129 aa8.65□□□□□ -1.02
COL1A2-213ENST00000620463 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
COL1A2-213ENST00000620463 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
COL1A2-213ENST00000620463 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.03
COL1A2-213ENST00000620463 EYSQ5T1H1 3165 aa8.64□□□□□ -1.03
COL1A2-213ENST00000620463 Q5VV11 94 aa8.64□□□□□ -1.03
COL1A2-213ENST00000620463 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
COL1A2-213ENST00000620463 CR1P17927 2039 aa8.64□□□□□ -1.03
COL1A2-213ENST00000620463 DSPP15924 2871 aaKnown RBP8.64□□□□□ -1.03
COL1A2-213ENST00000620463 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
COL1A2-213ENST00000620463 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
COL1A2-213ENST00000620463 PRR26Q8N8Z3 221 aa8.61□□□□□ -1.03
COL1A2-213ENST00000620463 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
COL1A2-213ENST00000620463 AKAP13Q12802 2813 aa8.6□□□□□ -1.03
COL1A2-213ENST00000620463 DSCR10P59022 87 aa8.6□□□□□ -1.03
COL1A2-213ENST00000620463 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
COL1A2-213ENST00000620463 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
COL1A2-213ENST00000620463 SPEGQ15772 3267 aa8.58□□□□□ -1.04
COL1A2-213ENST00000620463 FREM2Q5SZK8 3169 aa8.58□□□□□ -1.04
COL1A2-213ENST00000620463 PRR34Q9NV39 138 aa8.57□□□□□ -1.04
COL1A2-213ENST00000620463 LINC00313P59037 77 aa8.56□□□□□ -1.04
COL1A2-213ENST00000620463 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
COL1A2-213ENST00000620463 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
COL1A2-213ENST00000620463 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
COL1A2-213ENST00000620463 H3BNG1 76 aa8.53□□□□□ -1.04
COL1A2-213ENST00000620463 FRYLO94915 3013 aa8.53□□□□□ -1.04
COL1A2-213ENST00000620463 GIG44P09565 113 aaPredicted RBP8.53□□□□□ -1.04
COL1A2-213ENST00000620463 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
COL1A2-213ENST00000620463 IGLV7-46A0A075B6I9 117 aa8.52□□□□□ -1.05
COL1A2-213ENST00000620463 Q8NAQ8 132 aa8.52□□□□□ -1.05
COL1A2-213ENST00000620463 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.05
COL1A2-213ENST00000620463 LY6G6CO95867 125 aa8.51□□□□□ -1.05
COL1A2-213ENST00000620463 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
COL1A2-213ENST00000620463 REV3LO60673 3130 aa8.5□□□□□ -1.05
COL1A2-213ENST00000620463 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
COL1A2-213ENST00000620463 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
COL1A2-213ENST00000620463 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
COL1A2-213ENST00000620463 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
COL1A2-213ENST00000620463 Q8NDZ9 215 aa8.48□□□□□ -1.05
COL1A2-213ENST00000620463 SPINK7P58062 85 aa8.48□□□□□ -1.05
COL1A2-213ENST00000620463 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
COL1A2-213ENST00000620463 KRTAP24-1Q3LI83 254 aa8.46□□□□□ -1.06
COL1A2-213ENST00000620463 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.06
COL1A2-213ENST00000620463 NBEAQ8NFP9 2946 aa8.45□□□□□ -1.06
COL1A2-213ENST00000620463 C1orf134Q5TEV5 83 aa8.44□□□□□ -1.06
COL1A2-213ENST00000620463 FRYQ5TBA9 3013 aa8.43□□□□□ -1.06
COL1A2-213ENST00000620463 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
COL1A2-213ENST00000620463 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
COL1A2-213ENST00000620463 SPTBN5Q9NRC6 3674 aaKnown RBP8.43□□□□□ -1.06
COL1A2-213ENST00000620463 TEX15Q9BXT5 2789 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms