RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
COL5A1-208ENST00000618395 IGLV1-51P01701 117 aa10.21□□□□□ -0.77
COL5A1-208ENST00000618395 Q96NJ1 140 aa10.2□□□□□ -0.78
COL5A1-208ENST00000618395 ST20-AS1Q8NBB2 130 aa10.2□□□□□ -0.78
COL5A1-208ENST00000618395 DMAC1Q96GE9 116 aa10.2□□□□□ -0.78
COL5A1-208ENST00000618395 WISP2O76076 250 aa10.18□□□□□ -0.78
COL5A1-208ENST00000618395 EPG5Q9HCE0 2579 aa10.17□□□□□ -0.78
COL5A1-208ENST00000618395 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
COL5A1-208ENST00000618395 CENPEQ02224 2701 aa10.15□□□□□ -0.78
COL5A1-208ENST00000618395 Q6ZRP5 223 aa10.15□□□□□ -0.79
COL5A1-208ENST00000618395 GVQW2A0A096LPI5 108 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-208ENST00000618395 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
COL5A1-208ENST00000618395 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
COL5A1-208ENST00000618395 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
COL5A1-208ENST00000618395 A0A0D9SG42 100 aa10.1□□□□□ -0.79
COL5A1-208ENST00000618395 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
COL5A1-208ENST00000618395 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
COL5A1-208ENST00000618395 OCR1Q9BZK8 76 aa10.09□□□□□ -0.79
COL5A1-208ENST00000618395 IGFL1Q6UW32 110 aa10.08□□□□□ -0.8
COL5A1-208ENST00000618395 PRAC1Q96KF2 57 aa10.08□□□□□ -0.8
COL5A1-208ENST00000618395 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
COL5A1-208ENST00000618395 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
COL5A1-208ENST00000618395 FP248Q71RG6 208 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-208ENST00000618395 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
COL5A1-208ENST00000618395 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
COL5A1-208ENST00000618395 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
COL5A1-208ENST00000618395 KCNQ1DNQ9H478 68 aa10.05□□□□□ -0.8
COL5A1-208ENST00000618395 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
COL5A1-208ENST00000618395 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.8
COL5A1-208ENST00000618395 C9orf163Q8N9P6 203 aa10.02□□□□□ -0.81
COL5A1-208ENST00000618395 Q8N377 158 aa10.02□□□□□ -0.81
COL5A1-208ENST00000618395 HECTD1Q9ULT8 2610 aa10.01□□□□□ -0.81
COL5A1-208ENST00000618395 C16orf95Q9H693 158 aa10.01□□□□□ -0.81
COL5A1-208ENST00000618395 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
COL5A1-208ENST00000618395 XIRP2A4UGR9 3374 aa9.99□□□□□ -0.81
COL5A1-208ENST00000618395 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
COL5A1-208ENST00000618395 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-208ENST00000618395 DSCR10P59022 87 aa9.99□□□□□ -0.81
COL5A1-208ENST00000618395 Q5VV11 94 aa9.98□□□□□ -0.81
COL5A1-208ENST00000618395 OBSCN-AS1Q96MR7 158 aa9.98□□□□□ -0.81
COL5A1-208ENST00000618395 H3BNG1 76 aa9.98□□□□□ -0.81
COL5A1-208ENST00000618395 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-208ENST00000618395 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.81
COL5A1-208ENST00000618395 A0A1B0GU33 70 aa9.96□□□□□ -0.82
COL5A1-208ENST00000618395 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
COL5A1-208ENST00000618395 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
COL5A1-208ENST00000618395 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
COL5A1-208ENST00000618395 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
COL5A1-208ENST00000618395 PLA2G2DQ9UNK4 145 aa9.92□□□□□ -0.82
COL5A1-208ENST00000618395 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
COL5A1-208ENST00000618395 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
COL5A1-208ENST00000618395 MAST4O15021 2626 aa9.91□□□□□ -0.82
COL5A1-208ENST00000618395 DMBT1Q9UGM3 2413 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-208ENST00000618395 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
COL5A1-208ENST00000618395 C15orf56Q8N910 161 aa9.89□□□□□ -0.83
COL5A1-208ENST00000618395 ATRQ13535 2644 aa9.89□□□□□ -0.83
COL5A1-208ENST00000618395 VPS13AQ96RL7 3174 aa9.88□□□□□ -0.83
COL5A1-208ENST00000618395 ASB16-AS1Q495Z4 193 aa9.88□□□□□ -0.83
COL5A1-208ENST00000618395 CFAP46Q8IYW2 2715 aa9.87□□□□□ -0.83
COL5A1-208ENST00000618395 Q8N1X5 172 aa9.85□□□□□ -0.83
COL5A1-208ENST00000618395 CYSTM1Q9H1C7 97 aa9.85□□□□□ -0.83
COL5A1-208ENST00000618395 SMR3AQ99954 134 aa9.85□□□□□ -0.83
COL5A1-208ENST00000618395 SPINK7P58062 85 aa9.84□□□□□ -0.83
COL5A1-208ENST00000618395 RTL8CO15255 209 aa9.83□□□□□ -0.84
COL5A1-208ENST00000618395 MKI67P46013 3256 aaKnown RBP9.82□□□□□ -0.84
COL5A1-208ENST00000618395 REV3LO60673 3130 aa9.81□□□□□ -0.84
COL5A1-208ENST00000618395 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
COL5A1-208ENST00000618395 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
COL5A1-208ENST00000618395 MGAM2Q2M2H8 2515 aa9.79□□□□□ -0.84
COL5A1-208ENST00000618395 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
COL5A1-208ENST00000618395 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
COL5A1-208ENST00000618395 ZNF575Q86XF7 245 aa9.77□□□□□ -0.84
COL5A1-208ENST00000618395 Q8NAQ8 132 aa9.77□□□□□ -0.85
COL5A1-208ENST00000618395 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
COL5A1-208ENST00000618395 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
COL5A1-208ENST00000618395 IGLV5-37A0A075B6J1 123 aa9.75□□□□□ -0.85
COL5A1-208ENST00000618395 ITPR3Q14573 2671 aa9.74□□□□□ -0.85
COL5A1-208ENST00000618395 OXTP01178 125 aa9.74□□□□□ -0.85
COL5A1-208ENST00000618395 RANBP2P49792 3224 aaKnown RBP9.74□□□□□ -0.85
COL5A1-208ENST00000618395 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
COL5A1-208ENST00000618395 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
COL5A1-208ENST00000618395 FREM2Q5SZK8 3169 aa9.73□□□□□ -0.85
COL5A1-208ENST00000618395 TRANK1O15050 2925 aa9.73□□□□□ -0.85
COL5A1-208ENST00000618395 ZNF861PO60384 105 aa9.72□□□□□ -0.85
COL5A1-208ENST00000618395 TRIOO75962 3097 aa9.72□□□□□ -0.85
COL5A1-208ENST00000618395 C9orf92A6NGG3 77 aa9.71□□□□□ -0.85
COL5A1-208ENST00000618395 ROMO1P60602 79 aa9.71□□□□□ -0.85
COL5A1-208ENST00000618395 LINC00304Q8N9R0 145 aa9.71□□□□□ -0.86
COL5A1-208ENST00000618395 HRES1P13985 223 aa9.69□□□□□ -0.86
COL5A1-208ENST00000618395 COX6B2Q6YFQ2 88 aa9.69□□□□□ -0.86
COL5A1-208ENST00000618395 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
COL5A1-208ENST00000618395 KRTAP10-9P60411 292 aa9.67□□□□□ -0.86
COL5A1-208ENST00000618395 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
COL5A1-208ENST00000618395 PRR34Q9NV39 138 aa9.67□□□□□ -0.86
COL5A1-208ENST00000618395 GCN1Q92616 2671 aaKnown RBP9.67□□□□□ -0.86
COL5A1-208ENST00000618395 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
COL5A1-208ENST00000618395 NOTCH1P46531 2555 aa9.66□□□□□ -0.86
COL5A1-208ENST00000618395 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
COL5A1-208ENST00000618395 DNAH14Q0VDD8 3507 aa9.64□□□□□ -0.87
COL5A1-208ENST00000618395 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms