RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
NOP56-220ENST00000616692 RYR3Q15413 4870 aa10.33□□□□□ -0.76
NOP56-220ENST00000616692 ELOF1P60002 83 aaKnown RBP10.33□□□□□ -0.76
NOP56-220ENST00000616692 Q8N9L7 120 aa10.33□□□□□ -0.76
NOP56-220ENST00000616692 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
NOP56-220ENST00000616692 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
NOP56-220ENST00000616692 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
NOP56-220ENST00000616692 IGLV4-60A0A075B6I1 120 aa10.31□□□□□ -0.76
NOP56-220ENST00000616692 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
NOP56-220ENST00000616692 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
NOP56-220ENST00000616692 LINC00242Q5T6M2 205 aa10.31□□□□□ -0.76
NOP56-220ENST00000616692 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
NOP56-220ENST00000616692 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
NOP56-220ENST00000616692 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 C10orf99Q6UWK7 81 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 MUC7Q8TAX7 377 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
NOP56-220ENST00000616692 ADM2Q7Z4H4 148 aa10.29□□□□□ -0.76
NOP56-220ENST00000616692 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
NOP56-220ENST00000616692 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
NOP56-220ENST00000616692 Q9BRP9 147 aa10.29□□□□□ -0.76
NOP56-220ENST00000616692 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
NOP56-220ENST00000616692 NDUFB1O75438 58 aa10.28□□□□□ -0.76
NOP56-220ENST00000616692 LINC00158P58513 81 aa10.28□□□□□ -0.76
NOP56-220ENST00000616692 ATP6V0E1O15342 81 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 COL7A1Q02388 2944 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 IGHV3OR16-13A0A075B7E8 117 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 IGHV3-74A0A0B4J1X5 117 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 K7EQD1 137 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 CASC10Q5T4H9 136 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
NOP56-220ENST00000616692 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
NOP56-220ENST00000616692 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
NOP56-220ENST00000616692 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
NOP56-220ENST00000616692 Q8N9W7 124 aa10.24□□□□□ -0.77
NOP56-220ENST00000616692 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
NOP56-220ENST00000616692 RNF5Q99942 180 aa10.24□□□□□ -0.77
NOP56-220ENST00000616692 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
NOP56-220ENST00000616692 IGHV7-81A0A0B4J1V7 117 aa10.22□□□□□ -0.77
NOP56-220ENST00000616692 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
NOP56-220ENST00000616692 NDUFA4O00483 81 aa10.22□□□□□ -0.77
NOP56-220ENST00000616692 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
NOP56-220ENST00000616692 IGHV6-1A0A0B4J1U7 121 aa10.21□□□□□ -0.78
NOP56-220ENST00000616692 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.78
NOP56-220ENST00000616692 TRGV2A0A075B6R0 118 aa10.2□□□□□ -0.78
NOP56-220ENST00000616692 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
NOP56-220ENST00000616692 DEFB1P60022 68 aa10.19□□□□□ -0.78
NOP56-220ENST00000616692 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
NOP56-220ENST00000616692 LINC00575Q6W349 94 aa10.19□□□□□ -0.78
NOP56-220ENST00000616692 IGHV3-73A0A0B4J1V6 119 aa10.18□□□□□ -0.78
NOP56-220ENST00000616692 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
NOP56-220ENST00000616692 H3BQ85 93 aa10.18□□□□□ -0.78
NOP56-220ENST00000616692 C10orf25Q5T742 122 aa10.18□□□□□ -0.78
NOP56-220ENST00000616692 RYR2Q92736 4967 aa10.17□□□□□ -0.78
NOP56-220ENST00000616692 Q8NAQ8 132 aa10.17□□□□□ -0.78
NOP56-220ENST00000616692 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
NOP56-220ENST00000616692 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
NOP56-220ENST00000616692 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
NOP56-220ENST00000616692 DNAH7Q8WXX0 4024 aa10.16□□□□□ -0.78
NOP56-220ENST00000616692 NPBQ8NG41 125 aa10.16□□□□□ -0.78
NOP56-220ENST00000616692 IGLV1-51P01701 117 aa10.15□□□□□ -0.78
NOP56-220ENST00000616692 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
NOP56-220ENST00000616692 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
NOP56-220ENST00000616692 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
NOP56-220ENST00000616692 C19orf73Q9NVV2 129 aa10.15□□□□□ -0.78
NOP56-220ENST00000616692 A0A087X002 238 aa10.14□□□□□ -0.79
NOP56-220ENST00000616692 SPINK7P58062 85 aa10.13□□□□□ -0.79
NOP56-220ENST00000616692 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
NOP56-220ENST00000616692 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
NOP56-220ENST00000616692 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
NOP56-220ENST00000616692 LINC01558Q9Y6Z2 57 aa10.12□□□□□ -0.79
NOP56-220ENST00000616692 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
NOP56-220ENST00000616692 COX7BP24311 80 aa10.11□□□□□ -0.79
NOP56-220ENST00000616692 H3BUA1 57 aa10.11□□□□□ -0.79
NOP56-220ENST00000616692 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
NOP56-220ENST00000616692 SACSQ9NZJ4 4579 aa10.09□□□□□ -0.79
NOP56-220ENST00000616692 REG3AQ06141 175 aa10.08□□□□□ -0.8
NOP56-220ENST00000616692 Q6ZQY7 126 aa10.07□□□□□ -0.8
NOP56-220ENST00000616692 STAB2Q8WWQ8 2551 aa10.07□□□□□ -0.8
NOP56-220ENST00000616692 G3V318 75 aa10.07□□□□□ -0.8
NOP56-220ENST00000616692 IGHV4-30-4P0DP06 118 aa10.07□□□□□ -0.8
NOP56-220ENST00000616692 X6R8D5 127 aa10.07□□□□□ -0.8
NOP56-220ENST00000616692 SLURP1P55000 103 aa10.05□□□□□ -0.8
NOP56-220ENST00000616692 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
NOP56-220ENST00000616692 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
NOP56-220ENST00000616692 RTL8CO15255 209 aa10.05□□□□□ -0.8
NOP56-220ENST00000616692 COA5Q86WW8 74 aa10.04□□□□□ -0.8
NOP56-220ENST00000616692 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
NOP56-220ENST00000616692 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.03□□□□□ -0.8
NOP56-220ENST00000616692 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.8
NOP56-220ENST00000616692 CNBPP62633 177 aaKnown RBP10.01□□□□□ -0.81
NOP56-220ENST00000616692 CSAG1Q6PB30 78 aa10.01□□□□□ -0.81
NOP56-220ENST00000616692 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
NOP56-220ENST00000616692 KLK12Q9UKR0 248 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms