RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ANK2Q01484 3957 aa7.48□□□□□ -1.21
ATF3-211ENST00000613954 C6orf48Q9UBA6 75 aa7.48□□□□□ -1.21
ATF3-211ENST00000613954 KLK12Q9UKR0 248 aa7.48□□□□□ -1.21
ATF3-211ENST00000613954 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
ATF3-211ENST00000613954 K7EIL1 84 aa7.47□□□□□ -1.21
ATF3-211ENST00000613954 ATP5EP56381 51 aaPredicted RBP7.47□□□□□ -1.21
ATF3-211ENST00000613954 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
ATF3-211ENST00000613954 M0R378 163 aa7.45□□□□□ -1.22
ATF3-211ENST00000613954 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 ERC2-IT1O76042 136 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 VPREB1P12018 145 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 C1orf195Q5TG92 126 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 RMI2Q96E14 147 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 F8WEM9 126 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 H3BNG1 76 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 TM2D3Q9BRN9 247 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
ATF3-211ENST00000613954 Q6ZTC4 211 aa7.43□□□□□ -1.22
ATF3-211ENST00000613954 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
ATF3-211ENST00000613954 NREPQ16612 68 aa7.42□□□□□ -1.22
ATF3-211ENST00000613954 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
ATF3-211ENST00000613954 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
ATF3-211ENST00000613954 BPY2O14599 106 aa7.41□□□□□ -1.22
ATF3-211ENST00000613954 SCXQ7RTU7 201 aa7.4□□□□□ -1.22
ATF3-211ENST00000613954 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
ATF3-211ENST00000613954 TMEM254Q8TBM7 123 aa7.39□□□□□ -1.23
ATF3-211ENST00000613954 DEFB131BA0A096LNP1 70 aa7.39□□□□□ -1.23
ATF3-211ENST00000613954 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
ATF3-211ENST00000613954 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
ATF3-211ENST00000613954 A0A1B0GW54 56 aa7.37□□□□□ -1.23
ATF3-211ENST00000613954 NBEAL1Q6ZS30 2694 aa7.37□□□□□ -1.23
ATF3-211ENST00000613954 Q6ZRU5 148 aa7.37□□□□□ -1.23
ATF3-211ENST00000613954 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
ATF3-211ENST00000613954 KRTAP26-1Q6PEX3 210 aa7.35□□□□□ -1.23
ATF3-211ENST00000613954 TENM3Q9P273 2699 aa7.35□□□□□ -1.23
ATF3-211ENST00000613954 MGAM2Q2M2H8 2515 aa7.34□□□□□ -1.23
ATF3-211ENST00000613954 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
ATF3-211ENST00000613954 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
ATF3-211ENST00000613954 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.24
ATF3-211ENST00000613954 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.24
ATF3-211ENST00000613954 KCNQ1DNQ9H478 68 aa7.34□□□□□ -1.24
ATF3-211ENST00000613954 IGLV5-48A0A075B6I7 105 aa7.33□□□□□ -1.24
ATF3-211ENST00000613954 PRYO14603 147 aa7.33□□□□□ -1.24
ATF3-211ENST00000613954 B9D2Q9BPU9 175 aa7.33□□□□□ -1.24
ATF3-211ENST00000613954 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 ESRGQ1W209 222 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATF3-211ENST00000613954 Q6ZRP5 223 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 Q8N9L7 120 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
ATF3-211ENST00000613954 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
ATF3-211ENST00000613954 C3orf84H3BNL1 204 aa7.3□□□□□ -1.24
ATF3-211ENST00000613954 Q8N377 158 aa7.29□□□□□ -1.24
ATF3-211ENST00000613954 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
ATF3-211ENST00000613954 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
ATF3-211ENST00000613954 LINC01556Q5JQF7 62 aa7.28□□□□□ -1.24
ATF3-211ENST00000613954 DEFB105AQ8NG35 78 aa7.28□□□□□ -1.24
ATF3-211ENST00000613954 C7orf33Q8WU49 177 aa7.28□□□□□ -1.24
ATF3-211ENST00000613954 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
ATF3-211ENST00000613954 BRK1Q8WUW1 75 aa7.27□□□□□ -1.25
ATF3-211ENST00000613954 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.25
ATF3-211ENST00000613954 Q6ZRX8 168 aa7.27□□□□□ -1.25
ATF3-211ENST00000613954 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
ATF3-211ENST00000613954 C1orf137Q5JT78 98 aa7.25□□□□□ -1.25
ATF3-211ENST00000613954 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
ATF3-211ENST00000613954 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 LCE6AA0A183 80 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 TNP2Q05952 138 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 PMAIP1Q13794 54 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 Q8NBF4 154 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
ATF3-211ENST00000613954 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
ATF3-211ENST00000613954 SPRR1AP35321 89 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 CD164Q04900 197 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
ATF3-211ENST00000613954 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
ATF3-211ENST00000613954 PRR15Q8IV56 129 aa7.22□□□□□ -1.25
ATF3-211ENST00000613954 DNAH9Q9NYC9 4486 aa7.21□□□□□ -1.26
ATF3-211ENST00000613954 Q9BRP9 147 aa7.21□□□□□ -1.26
ATF3-211ENST00000613954 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.26
ATF3-211ENST00000613954 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
ATF3-211ENST00000613954 RPL37AP8A6NKH3 93 aa7.18□□□□□ -1.26
ATF3-211ENST00000613954 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
ATF3-211ENST00000613954 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
ATF3-211ENST00000613954 DSCR10P59022 87 aa7.17□□□□□ -1.26
ATF3-211ENST00000613954 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
ATF3-211ENST00000613954 APLNQ9ULZ1 77 aa7.17□□□□□ -1.26
ATF3-211ENST00000613954 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
ATF3-211ENST00000613954 ST20-AS1Q8NBB2 130 aa7.17□□□□□ -1.26
ATF3-211ENST00000613954 NUPR2A6NF83 97 aa7.16□□□□□ -1.26
ATF3-211ENST00000613954 MRPL55Q7Z7F7 128 aaKnown RBP7.16□□□□□ -1.26
ATF3-211ENST00000613954 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms