RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
TTC28-208ENST00000612946 C10orf142B7Z368 130 aa5.97□□□□□ -1.45
TTC28-208ENST00000612946 C16orf95Q9H693 158 aa5.96□□□□□ -1.46
TTC28-208ENST00000612946 ITPR3Q14573 2671 aa5.96□□□□□ -1.46
TTC28-208ENST00000612946 NOTCH1P46531 2555 aa5.95□□□□□ -1.46
TTC28-208ENST00000612946 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
TTC28-208ENST00000612946 CDSNQ15517 529 aa5.94□□□□□ -1.46
TTC28-208ENST00000612946 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
TTC28-208ENST00000612946 CENPFP49454 3210 aa5.93□□□□□ -1.46
TTC28-208ENST00000612946 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
TTC28-208ENST00000612946 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
TTC28-208ENST00000612946 C10orf99Q6UWK7 81 aa5.93□□□□□ -1.46
TTC28-208ENST00000612946 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
TTC28-208ENST00000612946 PRO3102Q9H379 93 aa5.92□□□□□ -1.46
TTC28-208ENST00000612946 CHD6Q8TD26 2715 aa5.91□□□□□ -1.46
TTC28-208ENST00000612946 IGLV5-52A0A0A0MRZ9 124 aa5.91□□□□□ -1.46
TTC28-208ENST00000612946 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
TTC28-208ENST00000612946 UNC79Q9P2D8 2635 aa5.91□□□□□ -1.46
TTC28-208ENST00000612946 GCN1Q92616 2671 aaKnown RBP5.9□□□□□ -1.47
TTC28-208ENST00000612946 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.47
TTC28-208ENST00000612946 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.47
TTC28-208ENST00000612946 PHF5AQ7RTV0 110 aaKnown RBP5.89□□□□□ -1.47
TTC28-208ENST00000612946 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
TTC28-208ENST00000612946 BAHCC1Q9P281 2608 aa5.89□□□□□ -1.47
TTC28-208ENST00000612946 FAM104AQ969W3 186 aa5.89□□□□□ -1.47
TTC28-208ENST00000612946 LINC00588Q9Y4M8 146 aa5.89□□□□□ -1.47
TTC28-208ENST00000612946 IGLV8-61A0A075B6I0 122 aa5.88□□□□□ -1.47
TTC28-208ENST00000612946 C15orf56Q8N910 161 aa5.88□□□□□ -1.47
TTC28-208ENST00000612946 CHTF8P0CG12 524 aa5.88□□□□□ -1.47
TTC28-208ENST00000612946 ST20-AS1Q8NBB2 130 aa5.88□□□□□ -1.47
TTC28-208ENST00000612946 TEX15Q9BXT5 2789 aa5.88□□□□□ -1.47
TTC28-208ENST00000612946 EP400Q96L91 3159 aa5.87□□□□□ -1.47
TTC28-208ENST00000612946 IGLV5-48A0A075B6I7 105 aa5.87□□□□□ -1.47
TTC28-208ENST00000612946 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
TTC28-208ENST00000612946 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
TTC28-208ENST00000612946 C18orf65Q6ZTR6 163 aa5.86□□□□□ -1.47
TTC28-208ENST00000612946 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
TTC28-208ENST00000612946 TEP1Q99973 2627 aaKnown RBP5.85□□□□□ -1.47
TTC28-208ENST00000612946 KMT2BQ9UMN6 2715 aaPredicted RBP5.85□□□□□ -1.47
TTC28-208ENST00000612946 SPRR4Q96PI1 79 aa5.85□□□□□ -1.47
TTC28-208ENST00000612946 STAB2Q8WWQ8 2551 aa5.85□□□□□ -1.47
TTC28-208ENST00000612946 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
TTC28-208ENST00000612946 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.47
TTC28-208ENST00000612946 COL6A5A8TX70 2615 aa5.84□□□□□ -1.48
TTC28-208ENST00000612946 Q5VV11 94 aa5.83□□□□□ -1.48
TTC28-208ENST00000612946 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
TTC28-208ENST00000612946 A0A087X002 238 aa5.82□□□□□ -1.48
TTC28-208ENST00000612946 PRR34Q9NV39 138 aa5.81□□□□□ -1.48
TTC28-208ENST00000612946 EIF4EBP3O60516 100 aaPredicted RBP5.81□□□□□ -1.48
TTC28-208ENST00000612946 C1orf134Q5TEV5 83 aa5.81□□□□□ -1.48
TTC28-208ENST00000612946 Q8N377 158 aa5.81□□□□□ -1.48
TTC28-208ENST00000612946 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
TTC28-208ENST00000612946 C9orf129Q5T035 196 aaKnown RBP5.78□□□□□ -1.48
TTC28-208ENST00000612946 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
TTC28-208ENST00000612946 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
TTC28-208ENST00000612946 ZNF292O60281 2723 aa5.76□□□□□ -1.49
TTC28-208ENST00000612946 SPACA4Q8TDM5 124 aa5.76□□□□□ -1.49
TTC28-208ENST00000612946 APLNQ9ULZ1 77 aa5.76□□□□□ -1.49
TTC28-208ENST00000612946 Q8NAQ8 132 aa5.74□□□□□ -1.49
TTC28-208ENST00000612946 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
TTC28-208ENST00000612946 A0A1B0GU33 70 aa5.74□□□□□ -1.49
TTC28-208ENST00000612946 Q96NJ1 140 aa5.74□□□□□ -1.49
TTC28-208ENST00000612946 LINC00612Q8N6U2 182 aa5.73□□□□□ -1.49
TTC28-208ENST00000612946 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
TTC28-208ENST00000612946 TNP2Q05952 138 aa5.72□□□□□ -1.49
TTC28-208ENST00000612946 DSCR10P59022 87 aa5.71□□□□□ -1.5
TTC28-208ENST00000612946 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
TTC28-208ENST00000612946 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
TTC28-208ENST00000612946 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
TTC28-208ENST00000612946 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
TTC28-208ENST00000612946 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
TTC28-208ENST00000612946 ITPR2Q14571 2701 aa5.69□□□□□ -1.5
TTC28-208ENST00000612946 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
TTC28-208ENST00000612946 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
TTC28-208ENST00000612946 SMR3AQ99954 134 aa5.68□□□□□ -1.5
TTC28-208ENST00000612946 ZNF861PO60384 105 aa5.67□□□□□ -1.5
TTC28-208ENST00000612946 C9orf163Q8N9P6 203 aa5.67□□□□□ -1.5
TTC28-208ENST00000612946 CNBPP62633 177 aaKnown RBP5.67□□□□□ -1.5
TTC28-208ENST00000612946 OXTP01178 125 aa5.67□□□□□ -1.5
TTC28-208ENST00000612946 FAM168BA1KXE4 195 aa5.65□□□□□ -1.5
TTC28-208ENST00000612946 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
TTC28-208ENST00000612946 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
TTC28-208ENST00000612946 RTL8CO15255 209 aa5.64□□□□□ -1.51
TTC28-208ENST00000612946 PRR26Q8N8Z3 221 aa5.63□□□□□ -1.51
TTC28-208ENST00000612946 HRES1P13985 223 aa5.62□□□□□ -1.51
TTC28-208ENST00000612946 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
TTC28-208ENST00000612946 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
TTC28-208ENST00000612946 DNAH12Q6ZR08 3092 aa5.61□□□□□ -1.51
TTC28-208ENST00000612946 ROMO1P60602 79 aa5.61□□□□□ -1.51
TTC28-208ENST00000612946 A6NN06 94 aa5.61□□□□□ -1.51
TTC28-208ENST00000612946 J3QL48 77 aa5.61□□□□□ -1.51
TTC28-208ENST00000612946 A0A096LNT2 108 aa5.6□□□□□ -1.51
TTC28-208ENST00000612946 SPINK7P58062 85 aa5.6□□□□□ -1.51
TTC28-208ENST00000612946 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
TTC28-208ENST00000612946 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
TTC28-208ENST00000612946 COX6B2Q6YFQ2 88 aa5.57□□□□□ -1.52
TTC28-208ENST00000612946 Q6ZR54 194 aa5.57□□□□□ -1.52
TTC28-208ENST00000612946 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
TTC28-208ENST00000612946 ITPR1Q14643 2758 aa5.57□□□□□ -1.52
TTC28-208ENST00000612946 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms