RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SPANXDQ9BXN6 97 aa10.65□□□□□ -0.7
SEMA3B-211ENST00000612509 B5MCH6 92 aa10.64□□□□□ -0.71
SEMA3B-211ENST00000612509 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
SEMA3B-211ENST00000612509 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
SEMA3B-211ENST00000612509 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
SEMA3B-211ENST00000612509 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
SEMA3B-211ENST00000612509 Q6ZRX8 168 aa10.62□□□□□ -0.71
SEMA3B-211ENST00000612509 UBR4Q5T4S7 5183 aa10.61□□□□□ -0.71
SEMA3B-211ENST00000612509 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
SEMA3B-211ENST00000612509 LRP2P98164 4655 aa10.61□□□□□ -0.71
SEMA3B-211ENST00000612509 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
SEMA3B-211ENST00000612509 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
SEMA3B-211ENST00000612509 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
SEMA3B-211ENST00000612509 COPS9Q8WXC6 57 aa10.59□□□□□ -0.71
SEMA3B-211ENST00000612509 Q9BRP9 147 aa10.59□□□□□ -0.71
SEMA3B-211ENST00000612509 IFITM1P13164 125 aa10.58□□□□□ -0.72
SEMA3B-211ENST00000612509 Q6ZVH6 145 aa10.58□□□□□ -0.72
SEMA3B-211ENST00000612509 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
SEMA3B-211ENST00000612509 LINC00518Q8N0U6 118 aa10.57□□□□□ -0.72
SEMA3B-211ENST00000612509 C3orf22Q8N5N4 141 aa10.57□□□□□ -0.72
SEMA3B-211ENST00000612509 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
SEMA3B-211ENST00000612509 SCGB1D1O95968 90 aa10.56□□□□□ -0.72
SEMA3B-211ENST00000612509 TSPAN13O95857 204 aa10.55□□□□□ -0.72
SEMA3B-211ENST00000612509 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
SEMA3B-211ENST00000612509 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
SEMA3B-211ENST00000612509 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
SEMA3B-211ENST00000612509 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
SEMA3B-211ENST00000612509 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
SEMA3B-211ENST00000612509 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
SEMA3B-211ENST00000612509 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
SEMA3B-211ENST00000612509 LPAP08519 4548 aa10.48□□□□□ -0.73
SEMA3B-211ENST00000612509 PRR4Q16378 134 aa10.48□□□□□ -0.73
SEMA3B-211ENST00000612509 A6NDN8 102 aa10.47□□□□□ -0.73
SEMA3B-211ENST00000612509 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
SEMA3B-211ENST00000612509 COX8AP10176 69 aa10.46□□□□□ -0.73
SEMA3B-211ENST00000612509 COX7BP24311 80 aa10.46□□□□□ -0.73
SEMA3B-211ENST00000612509 DHRS4-AS1Q9P1J3 65 aa10.46□□□□□ -0.73
SEMA3B-211ENST00000612509 ST20-AS1Q8NBB2 130 aa10.45□□□□□ -0.74
SEMA3B-211ENST00000612509 Q8NBF4 154 aa10.45□□□□□ -0.74
SEMA3B-211ENST00000612509 TRAV13-2A0A0B4J235 113 aa10.44□□□□□ -0.74
SEMA3B-211ENST00000612509 IGLV9-49A0A0B4J1Y8 123 aa10.43□□□□□ -0.74
SEMA3B-211ENST00000612509 CTAG1AP78358 180 aa10.43□□□□□ -0.74
SEMA3B-211ENST00000612509 MOBPQ13875 183 aa10.43□□□□□ -0.74
SEMA3B-211ENST00000612509 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
SEMA3B-211ENST00000612509 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
SEMA3B-211ENST00000612509 SPAG11AQ6PDA7 123 aa10.42□□□□□ -0.74
SEMA3B-211ENST00000612509 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
SEMA3B-211ENST00000612509 A4D1N5 150 aa10.41□□□□□ -0.74
SEMA3B-211ENST00000612509 DLEU1O43261 78 aa10.41□□□□□ -0.74
SEMA3B-211ENST00000612509 SPATA45Q537H7 98 aa10.41□□□□□ -0.74
SEMA3B-211ENST00000612509 RETNLBQ9BQ08 111 aa10.41□□□□□ -0.74
SEMA3B-211ENST00000612509 VAMP8Q9BV40 100 aa10.4□□□□□ -0.74
SEMA3B-211ENST00000612509 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
SEMA3B-211ENST00000612509 HIST1H4GQ99525 98 aa10.39□□□□□ -0.75
SEMA3B-211ENST00000612509 SPRR1BP22528 89 aa10.38□□□□□ -0.75
SEMA3B-211ENST00000612509 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
SEMA3B-211ENST00000612509 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
SEMA3B-211ENST00000612509 C14orf144Q96I85 54 aa10.38□□□□□ -0.75
SEMA3B-211ENST00000612509 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
SEMA3B-211ENST00000612509 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
SEMA3B-211ENST00000612509 C12orf57Q99622 126 aa10.35□□□□□ -0.75
SEMA3B-211ENST00000612509 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
SEMA3B-211ENST00000612509 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
SEMA3B-211ENST00000612509 SPINK1P00995 79 aa10.33□□□□□ -0.76
SEMA3B-211ENST00000612509 RNF213Q63HN8 5207 aa10.32□□□□□ -0.76
SEMA3B-211ENST00000612509 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
SEMA3B-211ENST00000612509 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
SEMA3B-211ENST00000612509 NHP2Q9NX24 153 aaKnown RBP10.31□□□□□ -0.76
SEMA3B-211ENST00000612509 LAMTOR3Q9UHA4 124 aa10.31□□□□□ -0.76
SEMA3B-211ENST00000612509 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
SEMA3B-211ENST00000612509 TAL2Q16559 108 aa10.3□□□□□ -0.76
SEMA3B-211ENST00000612509 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
SEMA3B-211ENST00000612509 IGLV5-48A0A075B6I7 105 aa10.29□□□□□ -0.76
SEMA3B-211ENST00000612509 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
SEMA3B-211ENST00000612509 IGLV7-46A0A075B6I9 117 aa10.28□□□□□ -0.76
SEMA3B-211ENST00000612509 LINC01547P58512 204 aaPredicted RBP10.28□□□□□ -0.76
SEMA3B-211ENST00000612509 VAMP3Q15836 100 aa10.28□□□□□ -0.76
SEMA3B-211ENST00000612509 Q1RN00 199 aa10.27□□□□□ -0.77
SEMA3B-211ENST00000612509 SLC25A20O43772 301 aa10.26□□□□□ -0.77
SEMA3B-211ENST00000612509 FP248Q71RG6 208 aaPredicted RBP10.26□□□□□ -0.77
SEMA3B-211ENST00000612509 TPRXLQ17RH7 258 aa10.25□□□□□ -0.77
SEMA3B-211ENST00000612509 LINC00575Q6W349 94 aa10.25□□□□□ -0.77
SEMA3B-211ENST00000612509 A0A0B4J2C4 111 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 CFC1P0CG37 223 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 SMIM29Q86T20 159 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 Q8N377 158 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 RAB37Q96AX2 223 aa10.24□□□□□ -0.77
SEMA3B-211ENST00000612509 CEND1Q8N111 149 aa10.23□□□□□ -0.77
SEMA3B-211ENST00000612509 H7C2G1 150 aa10.22□□□□□ -0.77
SEMA3B-211ENST00000612509 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
SEMA3B-211ENST00000612509 hADV29S1A0JD25 119 aa10.2□□□□□ -0.78
SEMA3B-211ENST00000612509 Q6ZQY7 126 aa10.2□□□□□ -0.78
SEMA3B-211ENST00000612509 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
SEMA3B-211ENST00000612509 A6NJY4 79 aa10.19□□□□□ -0.78
SEMA3B-211ENST00000612509 HRCT1Q6UXD1 115 aa10.19□□□□□ -0.78
SEMA3B-211ENST00000612509 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
SEMA3B-211ENST00000612509 FXYD2P54710 66 aa10.18□□□□□ -0.78
SEMA3B-211ENST00000612509 CDIP1Q9H305 208 aa10.18□□□□□ -0.78
SEMA3B-211ENST00000612509 LIMD2Q9BT23 127 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms