RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 FAT2Q9NYQ8 4349 aa3.53□□□□□ -1.85
SSX9-202ENST00000608568 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3OR16-12A0A075B7B8 117 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 TRBV10-1A0A0K0K1A3 114 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
SSX9-202ENST00000608568 Q6ZTC4 211 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 Q6ZVQ6 151 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 STHQ8IWL8 128 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 IL17DQ8TAD2 202 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 COX7B2Q8TF08 81 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 RETNQ9HD89 108 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 MUC4Q99102 2169 aa3.52□□□□□ -1.85
SSX9-202ENST00000608568 DYNC1H1Q14204 4646 aaKnown RBP3.51□□□□□ -1.85
SSX9-202ENST00000608568 BPY2O14599 106 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 CCL18P55774 89 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 ECSCRQ19T08 205 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 LINC00476Q8WZB0 136 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 CYP4F30PQ9H0H9 118 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 HERC2O95714 4834 aa3.51□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3OR16-8A0A075B7F1 116 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 LCE6AA0A183 80 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 A8MTW9 85 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 NDUFB1O75438 58 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3-11P01762 117 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 COX17Q14061 63 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 PHF5AQ7RTV0 110 aaKnown RBP3.5□□□□□ -1.85
SSX9-202ENST00000608568 C11orf72Q8NBR9 251 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 RHPN1-AS1Q9BWJ2 59 aa3.5□□□□□ -1.85
SSX9-202ENST00000608568 RYR1P21817 5038 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.49□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3OR16-13A0A075B7E8 117 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3-74A0A0B4J1X5 117 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 UBE2L6O14933 153 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 UBE2AP49459 152 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 LINC00158P58513 81 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 HAMPP81172 84 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 COX6A2Q02221 97 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 KRTAP9-8Q9BYQ0 159 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
SSX9-202ENST00000608568 IGHV3-49A0A0A0MS15 119 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 K7EQG2 157 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
SSX9-202ENST00000608568 LINC00575Q6W349 94 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 UBE2E2Q96LR5 201 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 WFDC10AQ9H1F0 79 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 DNAH11Q96DT5 4516 aa3.48□□□□□ -1.85
SSX9-202ENST00000608568 PKD1P98161 4303 aa3.47□□□□□ -1.85
SSX9-202ENST00000608568 FAM229BQ4G0N7 80 aa3.47□□□□□ -1.85
SSX9-202ENST00000608568 RNASE13Q5GAN3 156 aaKnown RBP3.47□□□□□ -1.85
SSX9-202ENST00000608568 CASC10Q5T4H9 136 aa3.47□□□□□ -1.85
SSX9-202ENST00000608568 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
SSX9-202ENST00000608568 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.47□□□□□ -1.85
SSX9-202ENST00000608568 LINC00588Q9Y4M8 146 aa3.47□□□□□ -1.85
SSX9-202ENST00000608568 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 SLPIP03973 132 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 IGHV4-30-4P0DP06 118 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 Q6ZRP5 223 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 Q8IZM0 81 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
SSX9-202ENST00000608568 TRAV22A0A0B4J277 110 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 IGHV3OR16-9A0A0B4J2B5 98 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 M0R378 163 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 IGLV1-51P01701 117 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 COX7BP24311 80 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 DEFB104AQ8WTQ1 72 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 Q9UF83 564 aa3.45□□□□□ -1.86
SSX9-202ENST00000608568 A0A087X002 238 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 IGHV4-28A0A0C4DH34 117 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 C3orf84H3BNL1 204 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 H3BPC8 53 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 NANOS2P60321 138 aaKnown RBP3.44□□□□□ -1.86
SSX9-202ENST00000608568 SYCNQ0VAF6 134 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 SPINK13Q1W4C9 94 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 Q6ZTI0 123 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 ZCCHC13Q8WW36 166 aaKnown RBP3.44□□□□□ -1.86
SSX9-202ENST00000608568 MAP6D1Q9H9H5 199 aa3.44□□□□□ -1.86
SSX9-202ENST00000608568 LOC100131303A0A0U1RQF7 123 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 PSCAO43653 123 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 LINC00269Q8N2A0 174 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 SPANXA2-OT1Q8N9U9 137 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 Q9BRP9 147 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 HSPG2P98160 4391 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms