RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ANKRD39Q53RE8 183 aa9.76□□□□□ -0.85
LINC00240-203ENST00000606878 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
LINC00240-203ENST00000606878 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
LINC00240-203ENST00000606878 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
LINC00240-203ENST00000606878 LCE2AQ5TA79 106 aaPredicted RBP9.75□□□□□ -0.85
LINC00240-203ENST00000606878 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
LINC00240-203ENST00000606878 CBY1Q9Y3M2 126 aa9.75□□□□□ -0.85
LINC00240-203ENST00000606878 B5MCH6 92 aa9.74□□□□□ -0.85
LINC00240-203ENST00000606878 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
LINC00240-203ENST00000606878 SPRR4Q96PI1 79 aa9.74□□□□□ -0.85
LINC00240-203ENST00000606878 TSPAN13O95857 204 aa9.73□□□□□ -0.85
LINC00240-203ENST00000606878 TRAV23DV6A0A075B6W5 121 aa9.72□□□□□ -0.85
LINC00240-203ENST00000606878 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
LINC00240-203ENST00000606878 OR13C6PQ8NH95 151 aa9.72□□□□□ -0.85
LINC00240-203ENST00000606878 COPS9Q8WXC6 57 aa9.71□□□□□ -0.86
LINC00240-203ENST00000606878 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
LINC00240-203ENST00000606878 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
LINC00240-203ENST00000606878 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
LINC00240-203ENST00000606878 JOSD1Q15040 202 aaPredicted RBP9.7□□□□□ -0.86
LINC00240-203ENST00000606878 PCP2Q8IVA1 136 aa9.7□□□□□ -0.86
LINC00240-203ENST00000606878 Q6ZRX8 168 aa9.69□□□□□ -0.86
LINC00240-203ENST00000606878 Q6ZVH6 145 aa9.69□□□□□ -0.86
LINC00240-203ENST00000606878 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
LINC00240-203ENST00000606878 IFITM1P13164 125 aa9.68□□□□□ -0.86
LINC00240-203ENST00000606878 LINC00304Q8N9R0 145 aa9.68□□□□□ -0.86
LINC00240-203ENST00000606878 PPDPFQ9H3Y8 114 aa9.67□□□□□ -0.86
LINC00240-203ENST00000606878 ERC2-IT1O76042 136 aa9.66□□□□□ -0.86
LINC00240-203ENST00000606878 PRR4Q16378 134 aa9.66□□□□□ -0.86
LINC00240-203ENST00000606878 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
LINC00240-203ENST00000606878 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
LINC00240-203ENST00000606878 Q9BRP9 147 aa9.66□□□□□ -0.86
LINC00240-203ENST00000606878 C5orf52A6NGY3 159 aa9.65□□□□□ -0.86
LINC00240-203ENST00000606878 SCGB1D1O95968 90 aa9.65□□□□□ -0.86
LINC00240-203ENST00000606878 MUSTN1Q8IVN3 82 aa9.64□□□□□ -0.87
LINC00240-203ENST00000606878 CTAG1AP78358 180 aa9.63□□□□□ -0.87
LINC00240-203ENST00000606878 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
LINC00240-203ENST00000606878 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
LINC00240-203ENST00000606878 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
LINC00240-203ENST00000606878 LRP2P98164 4655 aa9.62□□□□□ -0.87
LINC00240-203ENST00000606878 A6NDN8 102 aa9.6□□□□□ -0.87
LINC00240-203ENST00000606878 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
LINC00240-203ENST00000606878 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
LINC00240-203ENST00000606878 COX7BP24311 80 aa9.58□□□□□ -0.88
LINC00240-203ENST00000606878 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
LINC00240-203ENST00000606878 SSBP3-AS1Q7Z2R9 100 aa9.57□□□□□ -0.88
LINC00240-203ENST00000606878 Q8NBF4 154 aa9.57□□□□□ -0.88
LINC00240-203ENST00000606878 IGLV9-49A0A0B4J1Y8 123 aa9.56□□□□□ -0.88
LINC00240-203ENST00000606878 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
LINC00240-203ENST00000606878 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
LINC00240-203ENST00000606878 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
LINC00240-203ENST00000606878 ELOF1P60002 83 aaKnown RBP9.55□□□□□ -0.88
LINC00240-203ENST00000606878 MOBPQ13875 183 aa9.53□□□□□ -0.88
LINC00240-203ENST00000606878 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
LINC00240-203ENST00000606878 SPINK1P00995 79 aa9.52□□□□□ -0.89
LINC00240-203ENST00000606878 COX8AP10176 69 aa9.52□□□□□ -0.89
LINC00240-203ENST00000606878 A0A1B0GWB2 263 aa9.51□□□□□ -0.89
LINC00240-203ENST00000606878 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
LINC00240-203ENST00000606878 A4D1N5 150 aa9.5□□□□□ -0.89
LINC00240-203ENST00000606878 DLEU1O43261 78 aa9.5□□□□□ -0.89
LINC00240-203ENST00000606878 SPRR1BP22528 89 aa9.5□□□□□ -0.89
LINC00240-203ENST00000606878 TAL2Q16559 108 aa9.5□□□□□ -0.89
LINC00240-203ENST00000606878 C9orf153Q5TBE3 101 aa9.49□□□□□ -0.89
LINC00240-203ENST00000606878 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
LINC00240-203ENST00000606878 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
LINC00240-203ENST00000606878 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
LINC00240-203ENST00000606878 VAMP3Q15836 100 aa9.48□□□□□ -0.89
LINC00240-203ENST00000606878 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
LINC00240-203ENST00000606878 LPAP08519 4548 aa9.48□□□□□ -0.89
LINC00240-203ENST00000606878 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
LINC00240-203ENST00000606878 C14orf144Q96I85 54 aa9.47□□□□□ -0.89
LINC00240-203ENST00000606878 SPATA45Q537H7 98 aa9.46□□□□□ -0.9
LINC00240-203ENST00000606878 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
LINC00240-203ENST00000606878 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
LINC00240-203ENST00000606878 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
LINC00240-203ENST00000606878 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
LINC00240-203ENST00000606878 SLC25A20O43772 301 aa9.43□□□□□ -0.9
LINC00240-203ENST00000606878 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
LINC00240-203ENST00000606878 FP248Q71RG6 208 aaPredicted RBP9.43□□□□□ -0.9
LINC00240-203ENST00000606878 HIGD1BQ9P298 99 aa9.42□□□□□ -0.9
LINC00240-203ENST00000606878 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
LINC00240-203ENST00000606878 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
LINC00240-203ENST00000606878 Q1RN00 199 aa9.4□□□□□ -0.9
LINC00240-203ENST00000606878 C12orf57Q99622 126 aa9.4□□□□□ -0.9
LINC00240-203ENST00000606878 CDIP1Q9H305 208 aa9.4□□□□□ -0.9
LINC00240-203ENST00000606878 IGLV5-48A0A075B6I7 105 aa9.39□□□□□ -0.91
LINC00240-203ENST00000606878 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
LINC00240-203ENST00000606878 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
LINC00240-203ENST00000606878 Q8N377 158 aa9.37□□□□□ -0.91
LINC00240-203ENST00000606878 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
LINC00240-203ENST00000606878 hADV29S1A0JD25 119 aa9.36□□□□□ -0.91
LINC00240-203ENST00000606878 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
LINC00240-203ENST00000606878 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
LINC00240-203ENST00000606878 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
LINC00240-203ENST00000606878 RNF213Q63HN8 5207 aa9.35□□□□□ -0.91
LINC00240-203ENST00000606878 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
LINC00240-203ENST00000606878 CFC1P0CG37 223 aa9.35□□□□□ -0.91
LINC00240-203ENST00000606878 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
LINC00240-203ENST00000606878 PYY3Q5JQD4 70 aa9.34□□□□□ -0.91
LINC00240-203ENST00000606878 HRCT1Q6UXD1 115 aa9.34□□□□□ -0.91
LINC00240-203ENST00000606878 C2orf91Q6ZV80 131 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms