RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
SSBP4-213ENST00000602088 SMCR5Q8TEV8 140 aa9.83□□□□□ -0.84
SSBP4-213ENST00000602088 SPRR4Q96PI1 79 aa9.83□□□□□ -0.84
SSBP4-213ENST00000602088 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
SSBP4-213ENST00000602088 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
SSBP4-213ENST00000602088 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-213ENST00000602088 LRP2P98164 4655 aa9.8□□□□□ -0.84
SSBP4-213ENST00000602088 Q6ZRX8 168 aa9.8□□□□□ -0.84
SSBP4-213ENST00000602088 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-213ENST00000602088 Q6ZVH6 145 aa9.79□□□□□ -0.84
SSBP4-213ENST00000602088 LINC00518Q8N0U6 118 aa9.79□□□□□ -0.84
SSBP4-213ENST00000602088 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
SSBP4-213ENST00000602088 Q9BRP9 147 aa9.79□□□□□ -0.84
SSBP4-213ENST00000602088 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
SSBP4-213ENST00000602088 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
SSBP4-213ENST00000602088 HSBP1L1C9JCN9 74 aa9.78□□□□□ -0.84
SSBP4-213ENST00000602088 IFITM1P13164 125 aa9.78□□□□□ -0.84
SSBP4-213ENST00000602088 PPDPFQ9H3Y8 114 aa9.78□□□□□ -0.84
SSBP4-213ENST00000602088 ERC2-IT1O76042 136 aa9.77□□□□□ -0.85
SSBP4-213ENST00000602088 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
SSBP4-213ENST00000602088 TSPAN13O95857 204 aa9.76□□□□□ -0.85
SSBP4-213ENST00000602088 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
SSBP4-213ENST00000602088 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-213ENST00000602088 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
SSBP4-213ENST00000602088 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
SSBP4-213ENST00000602088 LINC00483Q53H64 154 aa9.74□□□□□ -0.85
SSBP4-213ENST00000602088 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
SSBP4-213ENST00000602088 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
SSBP4-213ENST00000602088 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
SSBP4-213ENST00000602088 CTAG1AP78358 180 aa9.69□□□□□ -0.86
SSBP4-213ENST00000602088 A6NDN8 102 aa9.68□□□□□ -0.86
SSBP4-213ENST00000602088 PRR4Q16378 134 aa9.68□□□□□ -0.86
SSBP4-213ENST00000602088 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
SSBP4-213ENST00000602088 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
SSBP4-213ENST00000602088 DHRS4-AS1Q9P1J3 65 aa9.67□□□□□ -0.86
SSBP4-213ENST00000602088 LPAP08519 4548 aa9.67□□□□□ -0.86
SSBP4-213ENST00000602088 COX7BP24311 80 aa9.66□□□□□ -0.86
SSBP4-213ENST00000602088 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
SSBP4-213ENST00000602088 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
SSBP4-213ENST00000602088 TRAV13-2A0A0B4J235 113 aa9.65□□□□□ -0.86
SSBP4-213ENST00000602088 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
SSBP4-213ENST00000602088 COX8AP10176 69 aa9.65□□□□□ -0.86
SSBP4-213ENST00000602088 Q8NBF4 154 aa9.64□□□□□ -0.87
SSBP4-213ENST00000602088 IGLV9-49A0A0B4J1Y8 123 aa9.63□□□□□ -0.87
SSBP4-213ENST00000602088 DLEU1O43261 78 aa9.63□□□□□ -0.87
SSBP4-213ENST00000602088 A4D1N5 150 aa9.62□□□□□ -0.87
SSBP4-213ENST00000602088 MOBPQ13875 183 aa9.62□□□□□ -0.87
SSBP4-213ENST00000602088 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
SSBP4-213ENST00000602088 SSBP3-AS1Q7Z2R9 100 aa9.62□□□□□ -0.87
SSBP4-213ENST00000602088 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
SSBP4-213ENST00000602088 A0A1B0GWB2 263 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 SPRR1BP22528 89 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 C14orf144Q96I85 54 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
SSBP4-213ENST00000602088 HIST1H4GQ99525 98 aa9.59□□□□□ -0.87
SSBP4-213ENST00000602088 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
SSBP4-213ENST00000602088 SPINK1P00995 79 aa9.58□□□□□ -0.88
SSBP4-213ENST00000602088 C9orf153Q5TBE3 101 aa9.55□□□□□ -0.88
SSBP4-213ENST00000602088 SLC25A34Q6PIV7 304 aa9.55□□□□□ -0.88
SSBP4-213ENST00000602088 HIGD1BQ9P298 99 aa9.55□□□□□ -0.88
SSBP4-213ENST00000602088 TAL2Q16559 108 aa9.54□□□□□ -0.88
SSBP4-213ENST00000602088 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
SSBP4-213ENST00000602088 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
SSBP4-213ENST00000602088 TMA7Q9Y2S6 64 aaKnown RBP9.53□□□□□ -0.88
SSBP4-213ENST00000602088 RNF213Q63HN8 5207 aa9.53□□□□□ -0.88
SSBP4-213ENST00000602088 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.89
SSBP4-213ENST00000602088 VAMP3Q15836 100 aa9.52□□□□□ -0.89
SSBP4-213ENST00000602088 PYY3Q5JQD4 70 aa9.52□□□□□ -0.89
SSBP4-213ENST00000602088 C12orf57Q99622 126 aa9.52□□□□□ -0.89
SSBP4-213ENST00000602088 NHP2Q9NX24 153 aaKnown RBP9.52□□□□□ -0.89
SSBP4-213ENST00000602088 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
SSBP4-213ENST00000602088 IGLV5-48A0A075B6I7 105 aa9.51□□□□□ -0.89
SSBP4-213ENST00000602088 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
SSBP4-213ENST00000602088 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
SSBP4-213ENST00000602088 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
SSBP4-213ENST00000602088 Q1RN00 199 aa9.49□□□□□ -0.89
SSBP4-213ENST00000602088 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
SSBP4-213ENST00000602088 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
SSBP4-213ENST00000602088 CFC1P0CG37 223 aa9.48□□□□□ -0.89
SSBP4-213ENST00000602088 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
SSBP4-213ENST00000602088 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
SSBP4-213ENST00000602088 SMIM29Q86T20 159 aa9.48□□□□□ -0.89
SSBP4-213ENST00000602088 SLC25A20O43772 301 aa9.47□□□□□ -0.89
SSBP4-213ENST00000602088 Q8N377 158 aa9.47□□□□□ -0.89
SSBP4-213ENST00000602088 BVES-AS1Q5T3Y7 98 aa9.45□□□□□ -0.9
SSBP4-213ENST00000602088 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
SSBP4-213ENST00000602088 CEND1Q8N111 149 aa9.44□□□□□ -0.9
SSBP4-213ENST00000602088 RAB37Q96AX2 223 aa9.44□□□□□ -0.9
SSBP4-213ENST00000602088 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
SSBP4-213ENST00000602088 PRO1933Q9H354 126 aa9.43□□□□□ -0.9
SSBP4-213ENST00000602088 H7C2G1 150 aa9.42□□□□□ -0.9
SSBP4-213ENST00000602088 CDIP1Q9H305 208 aa9.42□□□□□ -0.9
SSBP4-213ENST00000602088 Q6ZQY7 126 aa9.41□□□□□ -0.9
SSBP4-213ENST00000602088 CD164Q04900 197 aa9.4□□□□□ -0.9
SSBP4-213ENST00000602088 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
SSBP4-213ENST00000602088 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
SSBP4-213ENST00000602088 A6NJY4 79 aa9.39□□□□□ -0.91
SSBP4-213ENST00000602088 FXYD2P54710 66 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms