RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	IGLV6-57	P01721	117 aa		13.64	□□□□□ -0.23
LTBP4-227	ENST00000600026	KRTAP10-4	P60372	401 aa	Predicted RBP	13.64	□□□□□ -0.23
LTBP4-227	ENST00000600026	NHP2	Q9NX24	153 aa	Known RBP	13.64	□□□□□ -0.23
LTBP4-227	ENST00000600026	PKHD1L1	Q86WI1	4243 aa		13.62	□□□□□ -0.23
LTBP4-227	ENST00000600026	PRY	O14603	147 aa		13.61	□□□□□ -0.23
LTBP4-227	ENST00000600026	RPL13A	P40429	203 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-227	ENST00000600026	KRTAP11-1	Q8IUC1	163 aa		13.59	□□□□□ -0.23
LTBP4-227	ENST00000600026	KCNQ1DN	Q9H478	68 aa		13.59	□□□□□ -0.23
LTBP4-227	ENST00000600026	PRO1854	Q9UHT4	67 aa		13.59	□□□□□ -0.23
LTBP4-227	ENST00000600026	TRAV23DV6	A0A075B6W5	121 aa		13.58	□□□□□ -0.24
LTBP4-227	ENST00000600026		A0A1B0GWB2	263 aa		13.58	□□□□□ -0.24
LTBP4-227	ENST00000600026	BATF	Q16520	125 aa		13.58	□□□□□ -0.24
LTBP4-227	ENST00000600026	REG3G	Q6UW15	175 aa		13.57	□□□□□ -0.24
LTBP4-227	ENST00000600026	PSORS1C2	Q9UIG4	136 aa		13.56	□□□□□ -0.24
LTBP4-227	ENST00000600026		H7C2G1	150 aa		13.54	□□□□□ -0.24
LTBP4-227	ENST00000600026		K7ERJ3	54 aa		13.54	□□□□□ -0.24
LTBP4-227	ENST00000600026	ZNF73	O43830	326 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP4-227	ENST00000600026		Q1RN00	199 aa		13.53	□□□□□ -0.24
LTBP4-227	ENST00000600026	C1orf137	Q5JT78	98 aa		13.52	□□□□□ -0.25
LTBP4-227	ENST00000600026	SMIM11B	Q8TCY0	68 aa		13.52	□□□□□ -0.25
LTBP4-227	ENST00000600026	ETDC	A0A1B0GVM5	59 aa		13.51	□□□□□ -0.25
LTBP4-227	ENST00000600026	DIRC1	Q969H9	104 aa		13.51	□□□□□ -0.25
LTBP4-227	ENST00000600026	BCE1	O60756	84 aa		13.5	□□□□□ -0.25
LTBP4-227	ENST00000600026	INAFM2	P0DMQ5	153 aa		13.5	□□□□□ -0.25
LTBP4-227	ENST00000600026	SPRR1A	P35321	89 aa		13.5	□□□□□ -0.25
LTBP4-227	ENST00000600026	RPL28	P46779	137 aa	Known RBP	13.48	□□□□□ -0.25
LTBP4-227	ENST00000600026	C6orf99	Q4VX62	202 aa		13.48	□□□□□ -0.25
LTBP4-227	ENST00000600026	FAM19A1	Q7Z5A9	133 aa		13.48	□□□□□ -0.25
LTBP4-227	ENST00000600026	SNHG12	Q9BXW3	62 aa		13.47	□□□□□ -0.25
LTBP4-227	ENST00000600026	SRRM2	Q9UQ35	2752 aa	Known RBP	13.47	□□□□□ -0.25
LTBP4-227	ENST00000600026	UBE2A	P49459	152 aa		13.46	□□□□□ -0.25
LTBP4-227	ENST00000600026	VAMP3	Q15836	100 aa		13.46	□□□□□ -0.25
LTBP4-227	ENST00000600026	TRBV7-6	A0A0J9YX20	115 aa		13.44	□□□□□ -0.26
LTBP4-227	ENST00000600026	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.44	□□□□□ -0.26
LTBP4-227	ENST00000600026	TSPAN13	O95857	204 aa		13.44	□□□□□ -0.26
LTBP4-227	ENST00000600026	COX7B	P24311	80 aa		13.44	□□□□□ -0.26
LTBP4-227	ENST00000600026	IGLV7-43	P04211	117 aa		13.43	□□□□□ -0.26
LTBP4-227	ENST00000600026	PSMB2	P49721	201 aa		13.43	□□□□□ -0.26
LTBP4-227	ENST00000600026		B5MCH6	92 aa		13.42	□□□□□ -0.26
LTBP4-227	ENST00000600026		H0Y9J4	135 aa		13.4	□□□□□ -0.26
LTBP4-227	ENST00000600026	ELOF1	P60002	83 aa	Known RBP	13.4	□□□□□ -0.26
LTBP4-227	ENST00000600026	PRLH	P81277	87 aa		13.4	□□□□□ -0.26
LTBP4-227	ENST00000600026		Q6ZRX8	168 aa		13.4	□□□□□ -0.26
LTBP4-227	ENST00000600026	COX6C	P09669	75 aa		13.39	□□□□□ -0.27
LTBP4-227	ENST00000600026	COL5A1-AS1	Q5SY13	56 aa		13.39	□□□□□ -0.27
LTBP4-227	ENST00000600026	FAT3	Q8TDW7	4589 aa		13.39	□□□□□ -0.27
LTBP4-227	ENST00000600026	TRIAP1	O43715	76 aa		13.38	□□□□□ -0.27
LTBP4-227	ENST00000600026	ZNF861P	O60384	105 aa		13.38	□□□□□ -0.27
LTBP4-227	ENST00000600026		H0YGX0	51 aa		13.37	□□□□□ -0.27
LTBP4-227	ENST00000600026	SPINK6	Q6UWN8	80 aa		13.37	□□□□□ -0.27
LTBP4-227	ENST00000600026	KRTAP13-1	Q8IUC0	172 aa		13.37	□□□□□ -0.27
LTBP4-227	ENST00000600026	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.37	□□□□□ -0.27
LTBP4-227	ENST00000600026	HIGD2A	Q9BW72	106 aa		13.35	□□□□□ -0.27
LTBP4-227	ENST00000600026	DHRS4-AS1	Q9P1J3	65 aa		13.35	□□□□□ -0.27
LTBP4-227	ENST00000600026	UBR4	Q5T4S7	5183 aa		13.35	□□□□□ -0.27
LTBP4-227	ENST00000600026	TAX1BP3	O14907	124 aa		13.34	□□□□□ -0.27
LTBP4-227	ENST00000600026	SCGB1C2	P0DMR2	95 aa		13.34	□□□□□ -0.27
LTBP4-227	ENST00000600026	SLC25A20	O43772	301 aa		13.33	□□□□□ -0.28
LTBP4-227	ENST00000600026	FLG2	Q5D862	2391 aa	Predicted RBP	13.33	□□□□□ -0.28
LTBP4-227	ENST00000600026	MYCBP2	O75592	4640 aa		13.32	□□□□□ -0.28
LTBP4-227	ENST00000600026	C9orf118	A6NHY6	69 aa		13.32	□□□□□ -0.28
LTBP4-227	ENST00000600026	NAA38	Q9BRA0	125 aa	Known RBP	13.32	□□□□□ -0.28
LTBP4-227	ENST00000600026		H3BUT2	72 aa		13.31	□□□□□ -0.28
LTBP4-227	ENST00000600026	SNCG	O76070	127 aa		13.31	□□□□□ -0.28
LTBP4-227	ENST00000600026		Q9BRP9	147 aa		13.31	□□□□□ -0.28
LTBP4-227	ENST00000600026	LRP1	Q07954	4544 aa	Known RBP	13.3	□□□□□ -0.28
LTBP4-227	ENST00000600026	LYRM7	Q5U5X0	104 aa		13.3	□□□□□ -0.28
LTBP4-227	ENST00000600026	LINC00575	Q6W349	94 aa		13.3	□□□□□ -0.28
LTBP4-227	ENST00000600026	SMCR5	Q8TEV8	140 aa		13.3	□□□□□ -0.28
LTBP4-227	ENST00000600026	hADV29S1	A0JD25	119 aa		13.27	□□□□□ -0.29
LTBP4-227	ENST00000600026	CLEC2B	Q92478	149 aa		13.26	□□□□□ -0.29
LTBP4-227	ENST00000600026		A0A1B0GX51	115 aa		13.25	□□□□□ -0.29
LTBP4-227	ENST00000600026	ERC2-IT1	O76042	136 aa		13.23	□□□□□ -0.29
LTBP4-227	ENST00000600026	FAM218A	Q96MZ4	157 aa		13.23	□□□□□ -0.29
LTBP4-227	ENST00000600026	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.23	□□□□□ -0.29
LTBP4-227	ENST00000600026		A0A1W2PPM0	123 aa		13.22	□□□□□ -0.29
LTBP4-227	ENST00000600026	FABP2	P12104	132 aa		13.22	□□□□□ -0.29
LTBP4-227	ENST00000600026	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.21	□□□□□ -0.29
LTBP4-227	ENST00000600026	OXT	P01178	125 aa		13.21	□□□□□ -0.29
LTBP4-227	ENST00000600026	TRBV20-1	A0A075B6N2	111 aa		13.18	□□□□□ -0.3
LTBP4-227	ENST00000600026	LST1	O00453	97 aa		13.18	□□□□□ -0.3
LTBP4-227	ENST00000600026	DNAL4	O96015	105 aa		13.18	□□□□□ -0.3
LTBP4-227	ENST00000600026	ATXN8	Q156A1	80 aa		13.18	□□□□□ -0.3
LTBP4-227	ENST00000600026	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.18	□□□□□ -0.3
LTBP4-227	ENST00000600026	TCL1B	O95988	128 aa		13.17	□□□□□ -0.3
LTBP4-227	ENST00000600026		Q6ZQY7	126 aa		13.17	□□□□□ -0.3
LTBP4-227	ENST00000600026	SPRR4	Q96PI1	79 aa		13.17	□□□□□ -0.3
LTBP4-227	ENST00000600026	TRAC	P01848	142 aa		13.16	□□□□□ -0.3
LTBP4-227	ENST00000600026	ST20-AS1	Q8NBB2	130 aa		13.16	□□□□□ -0.3
LTBP4-227	ENST00000600026	KRTAP1-4	P0C5Y4	121 aa		13.15	□□□□□ -0.3
LTBP4-227	ENST00000600026	LINC01600	Q96MT4	127 aa		13.15	□□□□□ -0.3
LTBP4-227	ENST00000600026	TNXB	P22105	4242 aa		13.15	□□□□□ -0.31
LTBP4-227	ENST00000600026	OCIAD2	Q56VL3	154 aa		13.14	□□□□□ -0.31
LTBP4-227	ENST00000600026	GAGE2A	Q6NT46	116 aa		13.14	□□□□□ -0.31
LTBP4-227	ENST00000600026	GHRH	P01286	108 aa		13.13	□□□□□ -0.31
LTBP4-227	ENST00000600026	DEFB105A	Q8NG35	78 aa		13.13	□□□□□ -0.31
LTBP4-227	ENST00000600026		J3QL48	77 aa		13.12	□□□□□ -0.31
LTBP4-227	ENST00000600026	TEX49	A0A1B0GTD5	131 aa		13.11	□□□□□ -0.31
LTBP4-227	ENST00000600026	SPCS1	Q9Y6A9	102 aa		13.11	□□□□□ -0.31
LTBP4-227	ENST00000600026	IGLV5-48	A0A075B6I7	105 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms