RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
UPF1-208ENST00000600012 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
UPF1-208ENST00000600012 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
UPF1-208ENST00000600012 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
UPF1-208ENST00000600012 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
UPF1-208ENST00000600012 TSPAN13O95857 204 aa7.94□□□□□ -1.14
UPF1-208ENST00000600012 Q1RN00 199 aa7.94□□□□□ -1.14
UPF1-208ENST00000600012 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
UPF1-208ENST00000600012 M0R378 163 aa7.93□□□□□ -1.14
UPF1-208ENST00000600012 S100A7L2Q5SY68 101 aa7.93□□□□□ -1.14
UPF1-208ENST00000600012 C7orf33Q8WU49 177 aa7.93□□□□□ -1.14
UPF1-208ENST00000600012 TRBV10-3A0A0K0K1G6 114 aa7.92□□□□□ -1.14
UPF1-208ENST00000600012 M0QXV9 152 aa7.92□□□□□ -1.14
UPF1-208ENST00000600012 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
UPF1-208ENST00000600012 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
UPF1-208ENST00000600012 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
UPF1-208ENST00000600012 LBHQ53QV2 105 aaPredicted RBP7.91□□□□□ -1.14
UPF1-208ENST00000600012 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
UPF1-208ENST00000600012 A0A087WYN8 130 aa7.9□□□□□ -1.14
UPF1-208ENST00000600012 C9orf118A6NHY6 69 aa7.9□□□□□ -1.14
UPF1-208ENST00000600012 H3BUT2 72 aa7.9□□□□□ -1.14
UPF1-208ENST00000600012 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
UPF1-208ENST00000600012 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
UPF1-208ENST00000600012 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
UPF1-208ENST00000600012 PHF5AQ7RTV0 110 aaKnown RBP7.89□□□□□ -1.15
UPF1-208ENST00000600012 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
UPF1-208ENST00000600012 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
UPF1-208ENST00000600012 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
UPF1-208ENST00000600012 PSMB2P49721 201 aa7.88□□□□□ -1.15
UPF1-208ENST00000600012 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
UPF1-208ENST00000600012 TRIAP1O43715 76 aa7.87□□□□□ -1.15
UPF1-208ENST00000600012 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
UPF1-208ENST00000600012 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
UPF1-208ENST00000600012 IGLV1-50A0A075B6I6 118 aa7.85□□□□□ -1.15
UPF1-208ENST00000600012 A0A1W2PPM0 123 aa7.85□□□□□ -1.15
UPF1-208ENST00000600012 UBE2BP63146 152 aa7.85□□□□□ -1.15
UPF1-208ENST00000600012 A0A1B0GV90 55 aa7.84□□□□□ -1.15
UPF1-208ENST00000600012 C6orf99Q4VX62 202 aa7.84□□□□□ -1.15
UPF1-208ENST00000600012 KRTAP11-1Q8IUC1 163 aa7.84□□□□□ -1.15
UPF1-208ENST00000600012 PRYO14603 147 aa7.83□□□□□ -1.16
UPF1-208ENST00000600012 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
UPF1-208ENST00000600012 KCNQ1DNQ9H478 68 aa7.83□□□□□ -1.16
UPF1-208ENST00000600012 ZNF73O43830 326 aaPredicted RBP7.82□□□□□ -1.16
UPF1-208ENST00000600012 FABP2P12104 132 aa7.82□□□□□ -1.16
UPF1-208ENST00000600012 DIRC1Q969H9 104 aa7.82□□□□□ -1.16
UPF1-208ENST00000600012 CLEC2BQ92478 149 aa7.81□□□□□ -1.16
UPF1-208ENST00000600012 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
UPF1-208ENST00000600012 COX6CP09669 75 aa7.8□□□□□ -1.16
UPF1-208ENST00000600012 VAMP3Q15836 100 aa7.8□□□□□ -1.16
UPF1-208ENST00000600012 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
UPF1-208ENST00000600012 REG3GQ6UW15 175 aa7.8□□□□□ -1.16
UPF1-208ENST00000600012 TCL1BO95988 128 aa7.79□□□□□ -1.16
UPF1-208ENST00000600012 SPRR1AP35321 89 aa7.79□□□□□ -1.16
UPF1-208ENST00000600012 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
UPF1-208ENST00000600012 FAM218AQ96MZ4 157 aa7.79□□□□□ -1.16
UPF1-208ENST00000600012 SPCS1Q9Y6A9 102 aa7.79□□□□□ -1.16
UPF1-208ENST00000600012 COX7BP24311 80 aa7.78□□□□□ -1.16
UPF1-208ENST00000600012 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
UPF1-208ENST00000600012 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
UPF1-208ENST00000600012 K7EP34 96 aa7.77□□□□□ -1.17
UPF1-208ENST00000600012 LRP2P98164 4655 aa7.77□□□□□ -1.17
UPF1-208ENST00000600012 TNXBP22105 4242 aa7.77□□□□□ -1.17
UPF1-208ENST00000600012 H0YGX0 51 aa7.76□□□□□ -1.17
UPF1-208ENST00000600012 ELOF1P60002 83 aaKnown RBP7.76□□□□□ -1.17
UPF1-208ENST00000600012 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
UPF1-208ENST00000600012 B5MCH6 92 aa7.75□□□□□ -1.17
UPF1-208ENST00000600012 LST1O00453 97 aa7.75□□□□□ -1.17
UPF1-208ENST00000600012 FAM19A1Q7Z5A9 133 aa7.75□□□□□ -1.17
UPF1-208ENST00000600012 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
UPF1-208ENST00000600012 TRBV20-1A0A075B6N2 111 aa7.74□□□□□ -1.17
UPF1-208ENST00000600012 PRLHP81277 87 aa7.74□□□□□ -1.17
UPF1-208ENST00000600012 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
UPF1-208ENST00000600012 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
UPF1-208ENST00000600012 H3BMG7 143 aa7.73□□□□□ -1.17
UPF1-208ENST00000600012 BCE1O60756 84 aa7.73□□□□□ -1.17
UPF1-208ENST00000600012 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
UPF1-208ENST00000600012 Q6ZRX8 168 aa7.73□□□□□ -1.17
UPF1-208ENST00000600012 GTF2H5Q6ZYL4 71 aa7.72□□□□□ -1.17
UPF1-208ENST00000600012 UBE2AP49459 152 aa7.71□□□□□ -1.18
UPF1-208ENST00000600012 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
UPF1-208ENST00000600012 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
UPF1-208ENST00000600012 MTURNQ8N3F0 131 aa7.71□□□□□ -1.18
UPF1-208ENST00000600012 Q9BRP9 147 aa7.71□□□□□ -1.18
UPF1-208ENST00000600012 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
UPF1-208ENST00000600012 TRACP01848 142 aa7.7□□□□□ -1.18
UPF1-208ENST00000600012 A0A1B0GX51 115 aa7.69□□□□□ -1.18
UPF1-208ENST00000600012 SLC25A20O43772 301 aa7.69□□□□□ -1.18
UPF1-208ENST00000600012 UBE2V1Q13404 147 aa7.69□□□□□ -1.18
UPF1-208ENST00000600012 SMCR5Q8TEV8 140 aa7.69□□□□□ -1.18
UPF1-208ENST00000600012 C9JAW5 83 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 DNAL4O96015 105 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 HIGD2AQ9BW72 106 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 DHRS4-AS1Q9P1J3 65 aa7.68□□□□□ -1.18
UPF1-208ENST00000600012 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
UPF1-208ENST00000600012 Q6ZQY7 126 aa7.67□□□□□ -1.18
UPF1-208ENST00000600012 H0Y9J4 135 aa7.66□□□□□ -1.18
UPF1-208ENST00000600012 SNCGO76070 127 aa7.65□□□□□ -1.18
UPF1-208ENST00000600012 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 315.2 ms