RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 KRTDAPP60985 99 aa10.62□□□□□ -0.71
IRF3-222ENST00000599144 HIST1H2BLQ99880 126 aa10.62□□□□□ -0.71
IRF3-222ENST00000599144 NDUFA12Q9UI09 145 aa10.62□□□□□ -0.71
IRF3-222ENST00000599144 DPM2O94777 84 aa10.61□□□□□ -0.71
IRF3-222ENST00000599144 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
IRF3-222ENST00000599144 C20orf202A1L168 122 aa10.59□□□□□ -0.71
IRF3-222ENST00000599144 KRTAP19-2Q3LHN2 52 aa10.59□□□□□ -0.71
IRF3-222ENST00000599144 Q9BRP9 147 aa10.59□□□□□ -0.71
IRF3-222ENST00000599144 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
IRF3-222ENST00000599144 SLC25A20O43772 301 aa10.58□□□□□ -0.72
IRF3-222ENST00000599144 IGKCP01834 107 aa10.58□□□□□ -0.72
IRF3-222ENST00000599144 LINC01545Q5VT33 79 aa10.58□□□□□ -0.72
IRF3-222ENST00000599144 SSBP3-AS1Q7Z2R9 100 aa10.58□□□□□ -0.72
IRF3-222ENST00000599144 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
IRF3-222ENST00000599144 AKR1D1P51857 326 aa10.57□□□□□ -0.72
IRF3-222ENST00000599144 RPS29P62273 56 aaKnown RBP10.56□□□□□ -0.72
IRF3-222ENST00000599144 MT1HP80294 61 aa10.55□□□□□ -0.72
IRF3-222ENST00000599144 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
IRF3-222ENST00000599144 DDTP30046 118 aa10.54□□□□□ -0.72
IRF3-222ENST00000599144 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
IRF3-222ENST00000599144 HERVK_113P61574 105 aa10.54□□□□□ -0.72
IRF3-222ENST00000599144 HERV-K104P63124 156 aa10.52□□□□□ -0.73
IRF3-222ENST00000599144 PCOTHQ58A44 107 aa10.52□□□□□ -0.73
IRF3-222ENST00000599144 ST20-AS1Q8NBB2 130 aa10.52□□□□□ -0.73
IRF3-222ENST00000599144 Q6ZRX8 168 aa10.51□□□□□ -0.73
IRF3-222ENST00000599144 S100A12P80511 92 aa10.5□□□□□ -0.73
IRF3-222ENST00000599144 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
IRF3-222ENST00000599144 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
IRF3-222ENST00000599144 IGLV8-61A0A075B6I0 122 aa10.48□□□□□ -0.73
IRF3-222ENST00000599144 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
IRF3-222ENST00000599144 LEPROTO15243 131 aa10.47□□□□□ -0.73
IRF3-222ENST00000599144 SCGB1D1O95968 90 aa10.46□□□□□ -0.73
IRF3-222ENST00000599144 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
IRF3-222ENST00000599144 LINC00587B1AMM8 73 aa10.45□□□□□ -0.74
IRF3-222ENST00000599144 E9PLD3 99 aa10.45□□□□□ -0.74
IRF3-222ENST00000599144 NPC2P61916 151 aa10.45□□□□□ -0.74
IRF3-222ENST00000599144 J3QQQ9 107 aa10.44□□□□□ -0.74
IRF3-222ENST00000599144 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
IRF3-222ENST00000599144 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
IRF3-222ENST00000599144 S100A7L2Q5SY68 101 aa10.44□□□□□ -0.74
IRF3-222ENST00000599144 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
IRF3-222ENST00000599144 TRAV23DV6A0A075B6W5 121 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 NMUP48645 174 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
IRF3-222ENST00000599144 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
IRF3-222ENST00000599144 SOSTDC1Q6X4U4 206 aa10.42□□□□□ -0.74
IRF3-222ENST00000599144 LORP23490 312 aaPredicted RBP10.4□□□□□ -0.74
IRF3-222ENST00000599144 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
IRF3-222ENST00000599144 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
IRF3-222ENST00000599144 JOSD1Q15040 202 aaPredicted RBP10.39□□□□□ -0.75
IRF3-222ENST00000599144 MIEN1Q9BRT3 115 aa10.39□□□□□ -0.75
IRF3-222ENST00000599144 CFC1BP0CG36 223 aa10.38□□□□□ -0.75
IRF3-222ENST00000599144 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
IRF3-222ENST00000599144 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
IRF3-222ENST00000599144 NDUFC2O95298 119 aa10.35□□□□□ -0.75
IRF3-222ENST00000599144 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
IRF3-222ENST00000599144 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
IRF3-222ENST00000599144 H7C2G1 150 aa10.32□□□□□ -0.76
IRF3-222ENST00000599144 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
IRF3-222ENST00000599144 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
IRF3-222ENST00000599144 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
IRF3-222ENST00000599144 M0R2T5 61 aa10.3□□□□□ -0.76
IRF3-222ENST00000599144 SPRR1BP22528 89 aa10.3□□□□□ -0.76
IRF3-222ENST00000599144 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
IRF3-222ENST00000599144 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
IRF3-222ENST00000599144 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
IRF3-222ENST00000599144 Q1RN00 199 aa10.28□□□□□ -0.76
IRF3-222ENST00000599144 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
IRF3-222ENST00000599144 A0A0G2JQZ4 141 aa10.27□□□□□ -0.77
IRF3-222ENST00000599144 TIMM17BO60830 172 aa10.27□□□□□ -0.77
IRF3-222ENST00000599144 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
IRF3-222ENST00000599144 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.77
IRF3-222ENST00000599144 PAM16Q9Y3D7 125 aa10.27□□□□□ -0.77
IRF3-222ENST00000599144 SPATA45Q537H7 98 aa10.26□□□□□ -0.77
IRF3-222ENST00000599144 DEFB105AQ8NG35 78 aa10.26□□□□□ -0.77
IRF3-222ENST00000599144 COX8AP10176 69 aa10.23□□□□□ -0.77
IRF3-222ENST00000599144 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
IRF3-222ENST00000599144 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
IRF3-222ENST00000599144 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
IRF3-222ENST00000599144 LITAFQ99732 161 aa10.22□□□□□ -0.77
IRF3-222ENST00000599144 DHRS4-AS1Q9P1J3 65 aa10.22□□□□□ -0.77
IRF3-222ENST00000599144 DLEU1O43261 78 aa10.21□□□□□ -0.77
IRF3-222ENST00000599144 C1orf195Q5TG92 126 aa10.21□□□□□ -0.77
IRF3-222ENST00000599144 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
IRF3-222ENST00000599144 FLGP20930 4061 aaPredicted RBP10.2□□□□□ -0.78
IRF3-222ENST00000599144 RPL37P61927 97 aaKnown RBP10.2□□□□□ -0.78
IRF3-222ENST00000599144 TAL2Q16559 108 aa10.2□□□□□ -0.78
IRF3-222ENST00000599144 Q6ZVH6 145 aa10.2□□□□□ -0.78
IRF3-222ENST00000599144 C14orf144Q96I85 54 aa10.2□□□□□ -0.78
IRF3-222ENST00000599144 LOC105371267A0A1B0GV96 52 aa10.19□□□□□ -0.78
IRF3-222ENST00000599144 COX7BP24311 80 aa10.19□□□□□ -0.78
IRF3-222ENST00000599144 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
IRF3-222ENST00000599144 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
IRF3-222ENST00000599144 SMIM6P0DI80 62 aa10.18□□□□□ -0.78
IRF3-222ENST00000599144 ELOF1P60002 83 aaKnown RBP10.18□□□□□ -0.78
IRF3-222ENST00000599144 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
IRF3-222ENST00000599144 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms