RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
SCAF1-203ENST00000598359 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
SCAF1-203ENST00000598359 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
SCAF1-203ENST00000598359 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
SCAF1-203ENST00000598359 LYRM7Q5U5X0 104 aa8.41□□□□□ -1.06
SCAF1-203ENST00000598359 M0QXV9 152 aa8.4□□□□□ -1.06
SCAF1-203ENST00000598359 CKS1BP61024 79 aa8.4□□□□□ -1.06
SCAF1-203ENST00000598359 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
SCAF1-203ENST00000598359 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.06
SCAF1-203ENST00000598359 CXCL5P42830 114 aa8.39□□□□□ -1.07
SCAF1-203ENST00000598359 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
SCAF1-203ENST00000598359 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
SCAF1-203ENST00000598359 UBE2BP63146 152 aa8.37□□□□□ -1.07
SCAF1-203ENST00000598359 DAND5Q8N907 189 aa8.37□□□□□ -1.07
SCAF1-203ENST00000598359 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
SCAF1-203ENST00000598359 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
SCAF1-203ENST00000598359 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
SCAF1-203ENST00000598359 NPC2P61916 151 aa8.35□□□□□ -1.07
SCAF1-203ENST00000598359 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
SCAF1-203ENST00000598359 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
SCAF1-203ENST00000598359 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
SCAF1-203ENST00000598359 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
SCAF1-203ENST00000598359 F8W1H4 67 aa8.33□□□□□ -1.08
SCAF1-203ENST00000598359 COX17Q14061 63 aa8.33□□□□□ -1.08
SCAF1-203ENST00000598359 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
SCAF1-203ENST00000598359 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
SCAF1-203ENST00000598359 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
SCAF1-203ENST00000598359 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
SCAF1-203ENST00000598359 H0Y9J4 135 aa8.32□□□□□ -1.08
SCAF1-203ENST00000598359 H3BMG7 143 aa8.31□□□□□ -1.08
SCAF1-203ENST00000598359 TCL1BO95988 128 aa8.31□□□□□ -1.08
SCAF1-203ENST00000598359 RPL13AP40429 203 aaKnown RBP8.31□□□□□ -1.08
SCAF1-203ENST00000598359 LINC00158P58513 81 aa8.31□□□□□ -1.08
SCAF1-203ENST00000598359 TRIAP1O43715 76 aa8.3□□□□□ -1.08
SCAF1-203ENST00000598359 Q1RN00 199 aa8.3□□□□□ -1.08
SCAF1-203ENST00000598359 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
SCAF1-203ENST00000598359 PSMB2P49721 201 aa8.29□□□□□ -1.08
SCAF1-203ENST00000598359 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
SCAF1-203ENST00000598359 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
SCAF1-203ENST00000598359 KRTAP1-4P0C5Y4 121 aa8.28□□□□□ -1.08
SCAF1-203ENST00000598359 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 H7C2G1 150 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 COX6CP09669 75 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 PFN2P35080 140 aa8.27□□□□□ -1.09
SCAF1-203ENST00000598359 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
SCAF1-203ENST00000598359 NDUFC2O95298 119 aa8.26□□□□□ -1.09
SCAF1-203ENST00000598359 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
SCAF1-203ENST00000598359 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
SCAF1-203ENST00000598359 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
SCAF1-203ENST00000598359 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
SCAF1-203ENST00000598359 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
SCAF1-203ENST00000598359 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
SCAF1-203ENST00000598359 LST1O00453 97 aa8.24□□□□□ -1.09
SCAF1-203ENST00000598359 ZNF861PO60384 105 aa8.24□□□□□ -1.09
SCAF1-203ENST00000598359 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
SCAF1-203ENST00000598359 K7ERU9 68 aa8.23□□□□□ -1.09
SCAF1-203ENST00000598359 LPAP08519 4548 aa8.22□□□□□ -1.09
SCAF1-203ENST00000598359 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
SCAF1-203ENST00000598359 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
SCAF1-203ENST00000598359 BCE1O60756 84 aa8.21□□□□□ -1.1
SCAF1-203ENST00000598359 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
SCAF1-203ENST00000598359 SLC25A20O43772 301 aa8.2□□□□□ -1.1
SCAF1-203ENST00000598359 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
SCAF1-203ENST00000598359 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 C9JAW5 83 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 H3BT86 120 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 MTURNQ8N3F0 131 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
SCAF1-203ENST00000598359 TRACP01848 142 aa8.18□□□□□ -1.1
SCAF1-203ENST00000598359 Q8NDZ9 215 aa8.18□□□□□ -1.1
SCAF1-203ENST00000598359 SMIM11BQ8TCY0 68 aa8.18□□□□□ -1.1
SCAF1-203ENST00000598359 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
SCAF1-203ENST00000598359 ANAPC11Q9NYG5 84 aa8.17□□□□□ -1.1
SCAF1-203ENST00000598359 A0A087X002 238 aa8.16□□□□□ -1.1
SCAF1-203ENST00000598359 H0YGX0 51 aa8.16□□□□□ -1.1
SCAF1-203ENST00000598359 VPREB1P12018 145 aa8.16□□□□□ -1.1
SCAF1-203ENST00000598359 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
SCAF1-203ENST00000598359 J3QR89 54 aa8.14□□□□□ -1.11
SCAF1-203ENST00000598359 UBE2AP49459 152 aa8.14□□□□□ -1.11
SCAF1-203ENST00000598359 KRTAP13-1Q8IUC0 172 aa8.14□□□□□ -1.11
SCAF1-203ENST00000598359 PPDPFLQ8WWR9 84 aa8.14□□□□□ -1.11
SCAF1-203ENST00000598359 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
SCAF1-203ENST00000598359 PRLHP81277 87 aa8.12□□□□□ -1.11
SCAF1-203ENST00000598359 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
SCAF1-203ENST00000598359 A0A1B0GX51 115 aa8.11□□□□□ -1.11
SCAF1-203ENST00000598359 IGLV6-57P01721 117 aa8.11□□□□□ -1.11
SCAF1-203ENST00000598359 PRR4Q16378 134 aa8.11□□□□□ -1.11
SCAF1-203ENST00000598359 MUC2Q02817 5179 aa8.11□□□□□ -1.11
SCAF1-203ENST00000598359 NCR3O14931 201 aa8.1□□□□□ -1.11
SCAF1-203ENST00000598359 CRYGAP11844 174 aa8.1□□□□□ -1.11
SCAF1-203ENST00000598359 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
SCAF1-203ENST00000598359 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
SCAF1-203ENST00000598359 M0R378 163 aa8.09□□□□□ -1.11
SCAF1-203ENST00000598359 KRTAP13-2Q52LG2 175 aa8.09□□□□□ -1.11
SCAF1-203ENST00000598359 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
SCAF1-203ENST00000598359 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms