RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 IFITM1P13164 125 aa10.3□□□□□ -0.76
SHKBP1-212ENST00000596163 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
SHKBP1-212ENST00000596163 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
SHKBP1-212ENST00000596163 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-212ENST00000596163 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
SHKBP1-212ENST00000596163 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
SHKBP1-212ENST00000596163 ZNF706Q9Y5V0 76 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-212ENST00000596163 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-212ENST00000596163 B5MCH6 92 aa10.26□□□□□ -0.77
SHKBP1-212ENST00000596163 JOSD1Q15040 202 aaPredicted RBP10.26□□□□□ -0.77
SHKBP1-212ENST00000596163 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
SHKBP1-212ENST00000596163 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
SHKBP1-212ENST00000596163 ZNF73O43830 326 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-212ENST00000596163 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
SHKBP1-212ENST00000596163 A0A087X002 238 aa10.23□□□□□ -0.77
SHKBP1-212ENST00000596163 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
SHKBP1-212ENST00000596163 Q6ZRX8 168 aa10.22□□□□□ -0.77
SHKBP1-212ENST00000596163 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
SHKBP1-212ENST00000596163 HMCN2Q8NDA2 5059 aa10.18□□□□□ -0.78
SHKBP1-212ENST00000596163 A6NDN8 102 aa10.17□□□□□ -0.78
SHKBP1-212ENST00000596163 COX8AP10176 69 aa10.17□□□□□ -0.78
SHKBP1-212ENST00000596163 KRTAP13-2Q52LG2 175 aa10.17□□□□□ -0.78
SHKBP1-212ENST00000596163 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
SHKBP1-212ENST00000596163 Q9BRP9 147 aa10.16□□□□□ -0.78
SHKBP1-212ENST00000596163 DLEU1O43261 78 aa10.15□□□□□ -0.78
SHKBP1-212ENST00000596163 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
SHKBP1-212ENST00000596163 COX7BP24311 80 aa10.14□□□□□ -0.79
SHKBP1-212ENST00000596163 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
SHKBP1-212ENST00000596163 VAMP8Q9BV40 100 aa10.14□□□□□ -0.79
SHKBP1-212ENST00000596163 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
SHKBP1-212ENST00000596163 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
SHKBP1-212ENST00000596163 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
SHKBP1-212ENST00000596163 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
SHKBP1-212ENST00000596163 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
SHKBP1-212ENST00000596163 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
SHKBP1-212ENST00000596163 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
SHKBP1-212ENST00000596163 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
SHKBP1-212ENST00000596163 TSPAN13O95857 204 aa10.11□□□□□ -0.79
SHKBP1-212ENST00000596163 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-212ENST00000596163 CTAG1AP78358 180 aa10.11□□□□□ -0.79
SHKBP1-212ENST00000596163 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
SHKBP1-212ENST00000596163 C14orf144Q96I85 54 aa10.1□□□□□ -0.79
SHKBP1-212ENST00000596163 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-212ENST00000596163 A4D1N5 150 aa10.09□□□□□ -0.79
SHKBP1-212ENST00000596163 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
SHKBP1-212ENST00000596163 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
SHKBP1-212ENST00000596163 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
SHKBP1-212ENST00000596163 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
SHKBP1-212ENST00000596163 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
SHKBP1-212ENST00000596163 VAMP3Q15836 100 aa10.05□□□□□ -0.8
SHKBP1-212ENST00000596163 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
SHKBP1-212ENST00000596163 ST20-AS1Q8NBB2 130 aa10.04□□□□□ -0.8
SHKBP1-212ENST00000596163 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
SHKBP1-212ENST00000596163 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-212ENST00000596163 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
SHKBP1-212ENST00000596163 PRR4Q16378 134 aa10.03□□□□□ -0.8
SHKBP1-212ENST00000596163 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
SHKBP1-212ENST00000596163 Q8NBF4 154 aa10.03□□□□□ -0.8
SHKBP1-212ENST00000596163 UBR4Q5T4S7 5183 aa10.01□□□□□ -0.81
SHKBP1-212ENST00000596163 SPRR1BP22528 89 aa10.01□□□□□ -0.81
SHKBP1-212ENST00000596163 MOBPQ13875 183 aa10.01□□□□□ -0.81
SHKBP1-212ENST00000596163 TAL2Q16559 108 aa10.01□□□□□ -0.81
SHKBP1-212ENST00000596163 SLC25A20O43772 301 aa10□□□□□ -0.81
SHKBP1-212ENST00000596163 LAMTOR3Q9UHA4 124 aa10□□□□□ -0.81
SHKBP1-212ENST00000596163 SPINK1P00995 79 aa9.99□□□□□ -0.81
SHKBP1-212ENST00000596163 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
SHKBP1-212ENST00000596163 C12orf57Q99622 126 aa9.99□□□□□ -0.81
SHKBP1-212ENST00000596163 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
SHKBP1-212ENST00000596163 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
SHKBP1-212ENST00000596163 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
SHKBP1-212ENST00000596163 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
SHKBP1-212ENST00000596163 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
SHKBP1-212ENST00000596163 A6NJY4 79 aa9.95□□□□□ -0.82
SHKBP1-212ENST00000596163 BVES-AS1Q5T3Y7 98 aa9.95□□□□□ -0.82
SHKBP1-212ENST00000596163 CEND1Q8N111 149 aa9.95□□□□□ -0.82
SHKBP1-212ENST00000596163 CFC1BP0CG36 223 aa9.94□□□□□ -0.82
SHKBP1-212ENST00000596163 CFC1P0CG37 223 aa9.94□□□□□ -0.82
SHKBP1-212ENST00000596163 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
SHKBP1-212ENST00000596163 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
SHKBP1-212ENST00000596163 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
SHKBP1-212ENST00000596163 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-212ENST00000596163 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
SHKBP1-212ENST00000596163 H7C2G1 150 aa9.91□□□□□ -0.82
SHKBP1-212ENST00000596163 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
SHKBP1-212ENST00000596163 LRP2P98164 4655 aa9.91□□□□□ -0.82
SHKBP1-212ENST00000596163 SNCGO76070 127 aa9.9□□□□□ -0.82
SHKBP1-212ENST00000596163 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
SHKBP1-212ENST00000596163 HSD52Q0P140 79 aa9.89□□□□□ -0.83
SHKBP1-212ENST00000596163 Q1RN00 199 aa9.89□□□□□ -0.83
SHKBP1-212ENST00000596163 LINC01547P58512 204 aaPredicted RBP9.88□□□□□ -0.83
SHKBP1-212ENST00000596163 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
SHKBP1-212ENST00000596163 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
SHKBP1-212ENST00000596163 IGLV7-46A0A075B6I9 117 aa9.87□□□□□ -0.83
SHKBP1-212ENST00000596163 H0YGX0 51 aa9.87□□□□□ -0.83
SHKBP1-212ENST00000596163 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-212ENST00000596163 Q8N377 158 aa9.86□□□□□ -0.83
SHKBP1-212ENST00000596163 FXYD2P54710 66 aa9.85□□□□□ -0.83
SHKBP1-212ENST00000596163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-212ENST00000596163 SMIM29Q86T20 159 aa9.85□□□□□ -0.83
SHKBP1-212ENST00000596163 F8WEM9 126 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms