RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 IFITM1P13164 125 aa11.33□□□□□ -0.6
GRAMD1A-205ENST00000595596 FAM19A1Q7Z5A9 133 aa11.33□□□□□ -0.6
GRAMD1A-205ENST00000595596 UBE2AP49459 152 aa11.32□□□□□ -0.6
GRAMD1A-205ENST00000595596 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
GRAMD1A-205ENST00000595596 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
GRAMD1A-205ENST00000595596 KCNQ1DNQ9H478 68 aa11.32□□□□□ -0.6
GRAMD1A-205ENST00000595596 DLEU1O43261 78 aa11.31□□□□□ -0.6
GRAMD1A-205ENST00000595596 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
GRAMD1A-205ENST00000595596 PRLHP81277 87 aa11.31□□□□□ -0.6
GRAMD1A-205ENST00000595596 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
GRAMD1A-205ENST00000595596 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
GRAMD1A-205ENST00000595596 KRTAP13-1Q8IUC0 172 aa11.3□□□□□ -0.6
GRAMD1A-205ENST00000595596 PPDPFQ9H3Y8 114 aa11.3□□□□□ -0.6
GRAMD1A-205ENST00000595596 S100A12P80511 92 aa11.29□□□□□ -0.6
GRAMD1A-205ENST00000595596 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
GRAMD1A-205ENST00000595596 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
GRAMD1A-205ENST00000595596 SPRR1AP35321 89 aa11.27□□□□□ -0.61
GRAMD1A-205ENST00000595596 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
GRAMD1A-205ENST00000595596 LINC00337Q8N6G1 96 aa11.27□□□□□ -0.61
GRAMD1A-205ENST00000595596 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
GRAMD1A-205ENST00000595596 ETDCA0A1B0GVM5 59 aa11.25□□□□□ -0.61
GRAMD1A-205ENST00000595596 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
GRAMD1A-205ENST00000595596 KRTAP4-16G5E9R7 235 aaPredicted RBP11.24□□□□□ -0.61
GRAMD1A-205ENST00000595596 C2orf91Q6ZV80 131 aa11.24□□□□□ -0.61
GRAMD1A-205ENST00000595596 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
GRAMD1A-205ENST00000595596 KRTAP9-2Q9BYQ4 174 aa11.22□□□□□ -0.61
GRAMD1A-205ENST00000595596 A4D1N5 150 aa11.21□□□□□ -0.61
GRAMD1A-205ENST00000595596 HIGD2AQ9BW72 106 aa11.21□□□□□ -0.61
GRAMD1A-205ENST00000595596 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.61
GRAMD1A-205ENST00000595596 KRTAP3-2Q9BYR7 98 aa11.21□□□□□ -0.61
GRAMD1A-205ENST00000595596 A6NDN8 102 aa11.2□□□□□ -0.62
GRAMD1A-205ENST00000595596 B5MCH6 92 aa11.2□□□□□ -0.62
GRAMD1A-205ENST00000595596 ZNF73O43830 326 aaPredicted RBP11.2□□□□□ -0.62
GRAMD1A-205ENST00000595596 TSPAN13O95857 204 aa11.2□□□□□ -0.62
GRAMD1A-205ENST00000595596 CBY1Q9Y3M2 126 aa11.2□□□□□ -0.62
GRAMD1A-205ENST00000595596 TRAV13-2A0A0B4J235 113 aa11.16□□□□□ -0.62
GRAMD1A-205ENST00000595596 Q6ZRX8 168 aa11.16□□□□□ -0.62
GRAMD1A-205ENST00000595596 SMCR5Q8TEV8 140 aa11.16□□□□□ -0.62
GRAMD1A-205ENST00000595596 C12orf57Q99622 126 aa11.16□□□□□ -0.62
GRAMD1A-205ENST00000595596 MUC2Q02817 5179 aa11.16□□□□□ -0.62
GRAMD1A-205ENST00000595596 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.62
GRAMD1A-205ENST00000595596 CRYGAP11844 174 aa11.14□□□□□ -0.63
GRAMD1A-205ENST00000595596 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
GRAMD1A-205ENST00000595596 Q9BRP9 147 aa11.14□□□□□ -0.63
GRAMD1A-205ENST00000595596 SMIM6P0DI80 62 aa11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 HINT1P49773 126 aaPredicted RBP11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 TAL2Q16559 108 aa11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 ANAPC11Q9NYG5 84 aa11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 UQCR10Q9UDW1 63 aa11.13□□□□□ -0.63
GRAMD1A-205ENST00000595596 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
GRAMD1A-205ENST00000595596 CEND1Q8N111 149 aa11.11□□□□□ -0.63
GRAMD1A-205ENST00000595596 A0A087X002 238 aa11.1□□□□□ -0.63
GRAMD1A-205ENST00000595596 COX7BP24311 80 aa11.1□□□□□ -0.63
GRAMD1A-205ENST00000595596 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
GRAMD1A-205ENST00000595596 PRO1933Q9H354 126 aa11.1□□□□□ -0.63
GRAMD1A-205ENST00000595596 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
GRAMD1A-205ENST00000595596 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
GRAMD1A-205ENST00000595596 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
GRAMD1A-205ENST00000595596 CFC1P0CG37 223 aa11.08□□□□□ -0.64
GRAMD1A-205ENST00000595596 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
GRAMD1A-205ENST00000595596 ZNF706Q9Y5V0 76 aaPredicted RBP11.08□□□□□ -0.64
GRAMD1A-205ENST00000595596 HSD52Q0P140 79 aa11.07□□□□□ -0.64
GRAMD1A-205ENST00000595596 FXYD2P54710 66 aa11.06□□□□□ -0.64
GRAMD1A-205ENST00000595596 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
GRAMD1A-205ENST00000595596 RAB37Q96AX2 223 aa11.06□□□□□ -0.64
GRAMD1A-205ENST00000595596 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
GRAMD1A-205ENST00000595596 A0A0B4J2C4 111 aa11.04□□□□□ -0.64
GRAMD1A-205ENST00000595596 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
GRAMD1A-205ENST00000595596 A0A1B0GWB2 263 aa11.04□□□□□ -0.64
GRAMD1A-205ENST00000595596 A6NJY4 79 aa11.04□□□□□ -0.64
GRAMD1A-205ENST00000595596 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
GRAMD1A-205ENST00000595596 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
GRAMD1A-205ENST00000595596 H7C2G1 150 aa11.02□□□□□ -0.65
GRAMD1A-205ENST00000595596 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
GRAMD1A-205ENST00000595596 ST20-AS1Q8NBB2 130 aa11.02□□□□□ -0.65
GRAMD1A-205ENST00000595596 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
GRAMD1A-205ENST00000595596 CDIP1Q9H305 208 aa11□□□□□ -0.65
GRAMD1A-205ENST00000595596 CTAG1AP78358 180 aa10.99□□□□□ -0.65
GRAMD1A-205ENST00000595596 LINC00483Q53H64 154 aa10.99□□□□□ -0.65
GRAMD1A-205ENST00000595596 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
GRAMD1A-205ENST00000595596 KRTAP9-6A0A140TA67 174 aa10.98□□□□□ -0.65
GRAMD1A-205ENST00000595596 VAMP3Q15836 100 aa10.98□□□□□ -0.65
GRAMD1A-205ENST00000595596 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
GRAMD1A-205ENST00000595596 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
GRAMD1A-205ENST00000595596 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
GRAMD1A-205ENST00000595596 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
GRAMD1A-205ENST00000595596 Q1RN00 199 aa10.96□□□□□ -0.65
GRAMD1A-205ENST00000595596 IGLV7-46A0A075B6I9 117 aa10.95□□□□□ -0.66
GRAMD1A-205ENST00000595596 K7ERJ3 54 aa10.95□□□□□ -0.66
GRAMD1A-205ENST00000595596 FAT4Q6V0I7 4981 aa10.94□□□□□ -0.66
GRAMD1A-205ENST00000595596 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
GRAMD1A-205ENST00000595596 TSTD3H0UI37 97 aa10.93□□□□□ -0.66
GRAMD1A-205ENST00000595596 SLC25A20O43772 301 aa10.92□□□□□ -0.66
GRAMD1A-205ENST00000595596 LINC00575Q6W349 94 aa10.92□□□□□ -0.66
GRAMD1A-205ENST00000595596 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
GRAMD1A-205ENST00000595596 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
GRAMD1A-205ENST00000595596 SPRR1BP22528 89 aa10.9□□□□□ -0.66
GRAMD1A-205ENST00000595596 hADV29S1A0JD25 119 aa10.89□□□□□ -0.67
GRAMD1A-205ENST00000595596 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms