RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SPRR1AP35321 89 aa9.03□□□□□ -0.96
DDX39A-221ENST00000593026 SLC25A34Q6PIV7 304 aa9.03□□□□□ -0.96
DDX39A-221ENST00000593026 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
DDX39A-221ENST00000593026 TRAV23DV6A0A075B6W5 121 aa9.02□□□□□ -0.97
DDX39A-221ENST00000593026 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
DDX39A-221ENST00000593026 CBY1Q9Y3M2 126 aa9.02□□□□□ -0.97
DDX39A-221ENST00000593026 LRP1Q07954 4544 aaKnown RBP9.01□□□□□ -0.97
DDX39A-221ENST00000593026 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
DDX39A-221ENST00000593026 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
DDX39A-221ENST00000593026 FAT3Q8TDW7 4589 aa8.99□□□□□ -0.97
DDX39A-221ENST00000593026 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
DDX39A-221ENST00000593026 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
DDX39A-221ENST00000593026 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
DDX39A-221ENST00000593026 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
DDX39A-221ENST00000593026 A4D1N5 150 aa8.97□□□□□ -0.97
DDX39A-221ENST00000593026 A6NDN8 102 aa8.97□□□□□ -0.97
DDX39A-221ENST00000593026 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
DDX39A-221ENST00000593026 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
DDX39A-221ENST00000593026 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.98
DDX39A-221ENST00000593026 B5MCH6 92 aa8.96□□□□□ -0.98
DDX39A-221ENST00000593026 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
DDX39A-221ENST00000593026 HINT1P49773 126 aaPredicted RBP8.95□□□□□ -0.98
DDX39A-221ENST00000593026 Q6ZRX8 168 aa8.95□□□□□ -0.98
DDX39A-221ENST00000593026 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
DDX39A-221ENST00000593026 KRTAP10-8P60410 259 aa8.92□□□□□ -0.98
DDX39A-221ENST00000593026 TAL2Q16559 108 aa8.92□□□□□ -0.98
DDX39A-221ENST00000593026 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
DDX39A-221ENST00000593026 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
DDX39A-221ENST00000593026 C12orf57Q99622 126 aa8.92□□□□□ -0.98
DDX39A-221ENST00000593026 SMIM6P0DI80 62 aa8.91□□□□□ -0.98
DDX39A-221ENST00000593026 Q9BRP9 147 aa8.91□□□□□ -0.98
DDX39A-221ENST00000593026 UQCR10Q9UDW1 63 aa8.91□□□□□ -0.98
DDX39A-221ENST00000593026 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-221ENST00000593026 RPL13AP40429 203 aaKnown RBP8.9□□□□□ -0.98
DDX39A-221ENST00000593026 ANAPC11Q9NYG5 84 aa8.9□□□□□ -0.98
DDX39A-221ENST00000593026 COX7BP24311 80 aa8.89□□□□□ -0.99
DDX39A-221ENST00000593026 CEND1Q8N111 149 aa8.89□□□□□ -0.99
DDX39A-221ENST00000593026 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
DDX39A-221ENST00000593026 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
DDX39A-221ENST00000593026 CRYGAP11844 174 aa8.88□□□□□ -0.99
DDX39A-221ENST00000593026 ELOF1P60002 83 aaKnown RBP8.88□□□□□ -0.99
DDX39A-221ENST00000593026 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
DDX39A-221ENST00000593026 A0A087X002 238 aa8.87□□□□□ -0.99
DDX39A-221ENST00000593026 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
DDX39A-221ENST00000593026 HSD52Q0P140 79 aa8.87□□□□□ -0.99
DDX39A-221ENST00000593026 FAM229BQ4G0N7 80 aa8.87□□□□□ -0.99
DDX39A-221ENST00000593026 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
DDX39A-221ENST00000593026 TMEM238LA0A1B0GVL6 79 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 A6NJY4 79 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 CFC1BP0CG36 223 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 CFC1P0CG37 223 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 RAB37Q96AX2 223 aa8.86□□□□□ -0.99
DDX39A-221ENST00000593026 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
DDX39A-221ENST00000593026 A0A0B4J2C4 111 aa8.84□□□□□ -0.99
DDX39A-221ENST00000593026 FXYD2P54710 66 aa8.84□□□□□ -0.99
DDX39A-221ENST00000593026 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
DDX39A-221ENST00000593026 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
DDX39A-221ENST00000593026 TNXBP22105 4242 aa8.82□□□□□ -1
DDX39A-221ENST00000593026 VAMP3Q15836 100 aa8.82□□□□□ -1
DDX39A-221ENST00000593026 KRTAP13-2Q52LG2 175 aa8.82□□□□□ -1
DDX39A-221ENST00000593026 H7C2G1 150 aa8.81□□□□□ -1
DDX39A-221ENST00000593026 LINC00483Q53H64 154 aa8.81□□□□□ -1
DDX39A-221ENST00000593026 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
DDX39A-221ENST00000593026 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
DDX39A-221ENST00000593026 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
DDX39A-221ENST00000593026 PRO1854Q9UHT4 67 aa8.79□□□□□ -1
DDX39A-221ENST00000593026 BVES-AS1Q5T3Y7 98 aa8.78□□□□□ -1
DDX39A-221ENST00000593026 C3orf22Q8N5N4 141 aa8.78□□□□□ -1
DDX39A-221ENST00000593026 SLC25A20O43772 301 aa8.77□□□□□ -1.01
DDX39A-221ENST00000593026 Q1RN00 199 aa8.77□□□□□ -1.01
DDX39A-221ENST00000593026 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
DDX39A-221ENST00000593026 LINC00575Q6W349 94 aa8.75□□□□□ -1.01
DDX39A-221ENST00000593026 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
DDX39A-221ENST00000593026 K7ERJ3 54 aa8.74□□□□□ -1.01
DDX39A-221ENST00000593026 SPRR1BP22528 89 aa8.74□□□□□ -1.01
DDX39A-221ENST00000593026 DEFB105AQ8NG35 78 aa8.73□□□□□ -1.01
DDX39A-221ENST00000593026 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
DDX39A-221ENST00000593026 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
DDX39A-221ENST00000593026 MOBPQ13875 183 aa8.72□□□□□ -1.01
DDX39A-221ENST00000593026 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
DDX39A-221ENST00000593026 H0YGX0 51 aa8.71□□□□□ -1.02
DDX39A-221ENST00000593026 M0R143 59 aa8.71□□□□□ -1.02
DDX39A-221ENST00000593026 IGLV5-48A0A075B6I7 105 aa8.7□□□□□ -1.02
DDX39A-221ENST00000593026 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
DDX39A-221ENST00000593026 Q8NBF4 154 aa8.7□□□□□ -1.02
DDX39A-221ENST00000593026 TSPAN13O95857 204 aa8.69□□□□□ -1.02
DDX39A-221ENST00000593026 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
DDX39A-221ENST00000593026 Q6ZQY7 126 aa8.69□□□□□ -1.02
DDX39A-221ENST00000593026 LAMTOR3Q9UHA4 124 aa8.69□□□□□ -1.02
DDX39A-221ENST00000593026 TRIAP1O43715 76 aa8.68□□□□□ -1.02
DDX39A-221ENST00000593026 SNCGO76070 127 aa8.68□□□□□ -1.02
DDX39A-221ENST00000593026 PSMB2P49721 201 aa8.68□□□□□ -1.02
DDX39A-221ENST00000593026 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
DDX39A-221ENST00000593026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-221ENST00000593026 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
DDX39A-221ENST00000593026 SPAG11AQ6PDA7 123 aa8.66□□□□□ -1.02
DDX39A-221ENST00000593026 Q8N377 158 aa8.66□□□□□ -1.02
DDX39A-221ENST00000593026 FAM218AQ96MZ4 157 aa8.65□□□□□ -1.02
DDX39A-221ENST00000593026 COX6CP09669 75 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms