RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 A6NDN8 102 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 CFC1BP0CG36 223 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 CFC1P0CG37 223 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 PRLHP81277 87 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 TMEM126AQ9H061 195 aa5.9□□□□□ -1.46
DDX39A-220ENST00000593008 TRAV23DV6A0A075B6W5 121 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 H7C2G1 150 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 RPL13AP40429 203 aaKnown RBP5.89□□□□□ -1.47
DDX39A-220ENST00000593008 TAL2Q16559 108 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 BVES-AS1Q5T3Y7 98 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 PPDPFQ9H3Y8 114 aa5.89□□□□□ -1.47
DDX39A-220ENST00000593008 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
DDX39A-220ENST00000593008 OXTP01178 125 aa5.88□□□□□ -1.47
DDX39A-220ENST00000593008 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
DDX39A-220ENST00000593008 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
DDX39A-220ENST00000593008 TNXBP22105 4242 aa5.88□□□□□ -1.47
DDX39A-220ENST00000593008 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
DDX39A-220ENST00000593008 PRYO14603 147 aa5.87□□□□□ -1.47
DDX39A-220ENST00000593008 BCE1O60756 84 aa5.87□□□□□ -1.47
DDX39A-220ENST00000593008 BATFQ16520 125 aa5.87□□□□□ -1.47
DDX39A-220ENST00000593008 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
DDX39A-220ENST00000593008 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
DDX39A-220ENST00000593008 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
DDX39A-220ENST00000593008 SPRR1AP35321 89 aa5.86□□□□□ -1.47
DDX39A-220ENST00000593008 SPINK6Q6UWN8 80 aa5.86□□□□□ -1.47
DDX39A-220ENST00000593008 FAM19A1Q7Z5A9 133 aa5.86□□□□□ -1.47
DDX39A-220ENST00000593008 SMIM11BQ8TCY0 68 aa5.86□□□□□ -1.47
DDX39A-220ENST00000593008 A0A0B4J2C4 111 aa5.85□□□□□ -1.47
DDX39A-220ENST00000593008 ZNF73O43830 326 aaPredicted RBP5.85□□□□□ -1.47
DDX39A-220ENST00000593008 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
DDX39A-220ENST00000593008 C6orf99Q4VX62 202 aa5.85□□□□□ -1.47
DDX39A-220ENST00000593008 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
DDX39A-220ENST00000593008 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
DDX39A-220ENST00000593008 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
DDX39A-220ENST00000593008 B5MCH6 92 aa5.84□□□□□ -1.47
DDX39A-220ENST00000593008 NAA38Q9BRA0 125 aaKnown RBP5.84□□□□□ -1.47
DDX39A-220ENST00000593008 Q9BRP9 147 aa5.84□□□□□ -1.47
DDX39A-220ENST00000593008 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
DDX39A-220ENST00000593008 TSPAN13O95857 204 aa5.83□□□□□ -1.48
DDX39A-220ENST00000593008 UBE2AP49459 152 aa5.83□□□□□ -1.48
DDX39A-220ENST00000593008 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
DDX39A-220ENST00000593008 DIRC1Q969H9 104 aa5.83□□□□□ -1.48
DDX39A-220ENST00000593008 TMEM238LA0A1B0GVL6 79 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 A6NJY4 79 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 SNCGO76070 127 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 SNHG12Q9BXW3 62 aa5.82□□□□□ -1.48
DDX39A-220ENST00000593008 M0R143 59 aa5.81□□□□□ -1.48
DDX39A-220ENST00000593008 ZNF861PO60384 105 aa5.81□□□□□ -1.48
DDX39A-220ENST00000593008 Q1RN00 199 aa5.81□□□□□ -1.48
DDX39A-220ENST00000593008 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
DDX39A-220ENST00000593008 PRO1854Q9UHT4 67 aa5.81□□□□□ -1.48
DDX39A-220ENST00000593008 TRIAP1O43715 76 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 COX7BP24311 80 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
DDX39A-220ENST00000593008 VAMP3Q15836 100 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 Q6ZRX8 168 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
DDX39A-220ENST00000593008 H0Y9J4 135 aa5.79□□□□□ -1.48
DDX39A-220ENST00000593008 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
DDX39A-220ENST00000593008 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
DDX39A-220ENST00000593008 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
DDX39A-220ENST00000593008 CLEC2BQ92478 149 aa5.77□□□□□ -1.49
DDX39A-220ENST00000593008 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
DDX39A-220ENST00000593008 GHRHP01286 108 aa5.76□□□□□ -1.49
DDX39A-220ENST00000593008 TRBV7-6A0A0J9YX20 115 aa5.75□□□□□ -1.49
DDX39A-220ENST00000593008 SLC25A20O43772 301 aa5.75□□□□□ -1.49
DDX39A-220ENST00000593008 PSMB2P49721 201 aa5.75□□□□□ -1.49
DDX39A-220ENST00000593008 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 A0A087X002 238 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 SPRR4Q96PI1 79 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
DDX39A-220ENST00000593008 GAGE2AQ6NT46 116 aa5.73□□□□□ -1.49
DDX39A-220ENST00000593008 H3BUT2 72 aa5.72□□□□□ -1.49
DDX39A-220ENST00000593008 LINC01547P58512 204 aaPredicted RBP5.72□□□□□ -1.49
DDX39A-220ENST00000593008 PRR26Q8N8Z3 221 aa5.72□□□□□ -1.49
DDX39A-220ENST00000593008 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
DDX39A-220ENST00000593008 COX6CP09669 75 aa5.71□□□□□ -1.5
DDX39A-220ENST00000593008 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
DDX39A-220ENST00000593008 Q6ZQY7 126 aa5.71□□□□□ -1.5
DDX39A-220ENST00000593008 C3orf22Q8N5N4 141 aa5.71□□□□□ -1.5
DDX39A-220ENST00000593008 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
DDX39A-220ENST00000593008 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
DDX39A-220ENST00000593008 H0YGX0 51 aa5.7□□□□□ -1.5
DDX39A-220ENST00000593008 TCL1BO95988 128 aa5.7□□□□□ -1.5
DDX39A-220ENST00000593008 CRYGAP11844 174 aa5.7□□□□□ -1.5
DDX39A-220ENST00000593008 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
DDX39A-220ENST00000593008 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
DDX39A-220ENST00000593008 SCGB1C2P0DMR2 95 aa5.68□□□□□ -1.5
DDX39A-220ENST00000593008 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
DDX39A-220ENST00000593008 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
DDX39A-220ENST00000593008 Q8N377 158 aa5.68□□□□□ -1.5
DDX39A-220ENST00000593008 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms