RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
APOC1-208ENST00000592535 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
APOC1-208ENST00000592535 C14orf144Q96I85 54 aa8.06□□□□□ -1.12
APOC1-208ENST00000592535 ETDCA0A1B0GVM5 59 aa8.05□□□□□ -1.12
APOC1-208ENST00000592535 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
APOC1-208ENST00000592535 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
APOC1-208ENST00000592535 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
APOC1-208ENST00000592535 PRO1933Q9H354 126 aa8.04□□□□□ -1.12
APOC1-208ENST00000592535 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
APOC1-208ENST00000592535 TRBV10-2A0A0K0K1G8 114 aa8.03□□□□□ -1.12
APOC1-208ENST00000592535 DDTP30046 118 aa8.03□□□□□ -1.12
APOC1-208ENST00000592535 SLC25A34Q6PIV7 304 aa8.03□□□□□ -1.12
APOC1-208ENST00000592535 ZNF706Q9Y5V0 76 aaPredicted RBP8.03□□□□□ -1.12
APOC1-208ENST00000592535 ZNF815PA8K554 130 aa8.02□□□□□ -1.13
APOC1-208ENST00000592535 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
APOC1-208ENST00000592535 NPC2P61916 151 aa8.02□□□□□ -1.13
APOC1-208ENST00000592535 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
APOC1-208ENST00000592535 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
APOC1-208ENST00000592535 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
APOC1-208ENST00000592535 B5MCH6 92 aa8.01□□□□□ -1.13
APOC1-208ENST00000592535 NDUFC2O95298 119 aa8.01□□□□□ -1.13
APOC1-208ENST00000592535 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
APOC1-208ENST00000592535 C2orf91Q6ZV80 131 aa8□□□□□ -1.13
APOC1-208ENST00000592535 LITAFQ99732 161 aa8□□□□□ -1.13
APOC1-208ENST00000592535 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
APOC1-208ENST00000592535 HIGD1BQ9P298 99 aa8□□□□□ -1.13
APOC1-208ENST00000592535 TIMM17BO60830 172 aa7.99□□□□□ -1.13
APOC1-208ENST00000592535 ERC2-IT1O76042 136 aa7.99□□□□□ -1.13
APOC1-208ENST00000592535 IGLV6-57P01721 117 aa7.99□□□□□ -1.13
APOC1-208ENST00000592535 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
APOC1-208ENST00000592535 TSTD3H0UI37 97 aa7.98□□□□□ -1.13
APOC1-208ENST00000592535 CTAG1AP78358 180 aa7.98□□□□□ -1.13
APOC1-208ENST00000592535 Q9BRP9 147 aa7.98□□□□□ -1.13
APOC1-208ENST00000592535 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
APOC1-208ENST00000592535 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
APOC1-208ENST00000592535 Q6ZRX8 168 aa7.97□□□□□ -1.13
APOC1-208ENST00000592535 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.14
APOC1-208ENST00000592535 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.14
APOC1-208ENST00000592535 Q8NBF4 154 aa7.96□□□□□ -1.14
APOC1-208ENST00000592535 LINC00308Q8TCZ7 52 aa7.95□□□□□ -1.14
APOC1-208ENST00000592535 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
APOC1-208ENST00000592535 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
APOC1-208ENST00000592535 SCGB1D4Q6XE38 83 aa7.94□□□□□ -1.14
APOC1-208ENST00000592535 ZNF73O43830 326 aaPredicted RBP7.93□□□□□ -1.14
APOC1-208ENST00000592535 Q6ZVH6 145 aa7.93□□□□□ -1.14
APOC1-208ENST00000592535 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
APOC1-208ENST00000592535 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
APOC1-208ENST00000592535 TAL2Q16559 108 aa7.92□□□□□ -1.14
APOC1-208ENST00000592535 IGLV9-49A0A0B4J1Y8 123 aa7.91□□□□□ -1.14
APOC1-208ENST00000592535 MOBPQ13875 183 aa7.91□□□□□ -1.14
APOC1-208ENST00000592535 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
APOC1-208ENST00000592535 IFITM1P13164 125 aa7.9□□□□□ -1.14
APOC1-208ENST00000592535 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
APOC1-208ENST00000592535 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
APOC1-208ENST00000592535 ST20-AS1Q8NBB2 130 aa7.89□□□□□ -1.15
APOC1-208ENST00000592535 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
APOC1-208ENST00000592535 SPINK1P00995 79 aa7.88□□□□□ -1.15
APOC1-208ENST00000592535 HSD52Q0P140 79 aa7.88□□□□□ -1.15
APOC1-208ENST00000592535 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
APOC1-208ENST00000592535 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
APOC1-208ENST00000592535 HINT1P49773 126 aaPredicted RBP7.87□□□□□ -1.15
APOC1-208ENST00000592535 SSBP3-AS1Q7Z2R9 100 aa7.87□□□□□ -1.15
APOC1-208ENST00000592535 CEND1Q8N111 149 aa7.87□□□□□ -1.15
APOC1-208ENST00000592535 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
APOC1-208ENST00000592535 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
APOC1-208ENST00000592535 BVES-AS1Q5T3Y7 98 aa7.85□□□□□ -1.15
APOC1-208ENST00000592535 C9orf153Q5TBE3 101 aa7.84□□□□□ -1.15
APOC1-208ENST00000592535 FXYD2P54710 66 aa7.83□□□□□ -1.16
APOC1-208ENST00000592535 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
APOC1-208ENST00000592535 A4D1N5 150 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 COX7BP24311 80 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 ELOF1P60002 83 aaKnown RBP7.82□□□□□ -1.16
APOC1-208ENST00000592535 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
APOC1-208ENST00000592535 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 Q8N377 158 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 DHRS4-AS1Q9P1J3 65 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
APOC1-208ENST00000592535 A0A1B0GWB2 263 aa7.81□□□□□ -1.16
APOC1-208ENST00000592535 M0R143 59 aa7.81□□□□□ -1.16
APOC1-208ENST00000592535 SPRR1BP22528 89 aa7.81□□□□□ -1.16
APOC1-208ENST00000592535 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
APOC1-208ENST00000592535 MUC2Q02817 5179 aa7.81□□□□□ -1.16
APOC1-208ENST00000592535 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
APOC1-208ENST00000592535 CFC1P0CG37 223 aa7.8□□□□□ -1.16
APOC1-208ENST00000592535 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
APOC1-208ENST00000592535 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
APOC1-208ENST00000592535 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
APOC1-208ENST00000592535 A6NDN8 102 aa7.77□□□□□ -1.17
APOC1-208ENST00000592535 A6NJY4 79 aa7.77□□□□□ -1.17
APOC1-208ENST00000592535 SLC25A20O43772 301 aa7.77□□□□□ -1.17
APOC1-208ENST00000592535 A0A0B4J2C4 111 aa7.76□□□□□ -1.17
APOC1-208ENST00000592535 TRBV7-6A0A0J9YX20 115 aa7.76□□□□□ -1.17
APOC1-208ENST00000592535 LAMTOR3Q9UHA4 124 aa7.76□□□□□ -1.17
APOC1-208ENST00000592535 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
APOC1-208ENST00000592535 NHP2Q9NX24 153 aaKnown RBP7.75□□□□□ -1.17
APOC1-208ENST00000592535 Q1RN00 199 aa7.74□□□□□ -1.17
APOC1-208ENST00000592535 HRCT1Q6UXD1 115 aa7.73□□□□□ -1.17
APOC1-208ENST00000592535 PRO1854Q9UHT4 67 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms