RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 HERVK_113P63121 156 aa4.35□□□□□ -1.71
VAT1-209ENST00000592388 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
VAT1-209ENST00000592388 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
VAT1-209ENST00000592388 Q6ZVH6 145 aa4.35□□□□□ -1.71
VAT1-209ENST00000592388 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
VAT1-209ENST00000592388 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
VAT1-209ENST00000592388 F8VRH5 84 aa4.34□□□□□ -1.71
VAT1-209ENST00000592388 RPL13AP40429 203 aaKnown RBP4.34□□□□□ -1.71
VAT1-209ENST00000592388 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
VAT1-209ENST00000592388 TOMM6Q96B49 74 aa4.34□□□□□ -1.71
VAT1-209ENST00000592388 TIMM17AQ99595 171 aa4.34□□□□□ -1.71
VAT1-209ENST00000592388 NXT2Q9NPJ8 142 aaKnown RBP4.34□□□□□ -1.71
VAT1-209ENST00000592388 TRBV20-1A0A075B6N2 111 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 E9PLD3 99 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 K7EMI3 77 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 CRYGAP11844 174 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
VAT1-209ENST00000592388 BCE1O60756 84 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 CXCL5P42830 114 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 RETNLBQ9BQ08 111 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
VAT1-209ENST00000592388 IGLV5-45A0A087WSX0 123 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 TINCRA0A1B0GVN0 87 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 C2orf91Q6ZV80 131 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 TEN1Q86WV5 123 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
VAT1-209ENST00000592388 IGKV2-28A0A075B6P5 120 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 A0A1B0GWB2 263 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 IGKV2D-28P01615 120 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 LORP23490 312 aaPredicted RBP4.3□□□□□ -1.72
VAT1-209ENST00000592388 RPL28P46779 137 aaKnown RBP4.3□□□□□ -1.72
VAT1-209ENST00000592388 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 KRTAP13-2Q52LG2 175 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
VAT1-209ENST00000592388 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
VAT1-209ENST00000592388 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
VAT1-209ENST00000592388 PRLHP81277 87 aa4.29□□□□□ -1.72
VAT1-209ENST00000592388 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
VAT1-209ENST00000592388 Q8NDZ9 215 aa4.29□□□□□ -1.72
VAT1-209ENST00000592388 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 A0A096LNJ9 63 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 UQCRQO14949 82 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 CFC1BP0CG36 223 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 PFN2P35080 140 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 UBE2AP49459 152 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 FAM19A2Q8N3H0 131 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
VAT1-209ENST00000592388 C9JAW5 83 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 ATP5LO75964 103 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 ACYP1P07311 99 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 VPREB1P12018 145 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 ZNF22P17026 224 aaPredicted RBP4.27□□□□□ -1.73
VAT1-209ENST00000592388 MT1HP80294 61 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 CEND1Q8N111 149 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 ZNF625Q96I27 306 aaPredicted RBP4.27□□□□□ -1.73
VAT1-209ENST00000592388 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
VAT1-209ENST00000592388 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
VAT1-209ENST00000592388 TMEM258P61165 79 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 COPS9Q8WXC6 57 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 PPDPFQ9H3Y8 114 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
VAT1-209ENST00000592388 C11orf86A6NJI1 115 aa4.25□□□□□ -1.73
VAT1-209ENST00000592388 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
VAT1-209ENST00000592388 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
VAT1-209ENST00000592388 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
VAT1-209ENST00000592388 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
VAT1-209ENST00000592388 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
VAT1-209ENST00000592388 M0R378 163 aa4.24□□□□□ -1.73
VAT1-209ENST00000592388 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
VAT1-209ENST00000592388 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
VAT1-209ENST00000592388 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
VAT1-209ENST00000592388 A0A0U1RRA0 63 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 LINC01549A6NIU2 74 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 H3BS24 57 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 HBDP02042 147 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 SEC61GP60059 68 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 V9GYY9 64 aa4.23□□□□□ -1.73
VAT1-209ENST00000592388 USH2AO75445 5202 aa4.22□□□□□ -1.73
VAT1-209ENST00000592388 IGKV2D-26A0A0A0MRZ7 120 aa4.22□□□□□ -1.73
VAT1-209ENST00000592388 DPM2O94777 84 aa4.22□□□□□ -1.73
VAT1-209ENST00000592388 PLNP26678 52 aa4.22□□□□□ -1.73
VAT1-209ENST00000592388 TMEM170BQ5T4T1 132 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms