RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 SVBPQ8N300 66 aa12.3□□□□□ -0.44
CXXC1-216ENST00000591474 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
CXXC1-216ENST00000591474 PLNP26678 52 aa12.29□□□□□ -0.44
CXXC1-216ENST00000591474 LIMD2Q9BT23 127 aa12.27□□□□□ -0.45
CXXC1-216ENST00000591474 LEPROTL1O95214 131 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 HERVK_113P61574 105 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 NDUFA5Q16718 116 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 SOSTDC1Q6X4U4 206 aa12.26□□□□□ -0.45
CXXC1-216ENST00000591474 LGALS3P17931 250 aaKnown RBP12.25□□□□□ -0.45
CXXC1-216ENST00000591474 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
CXXC1-216ENST00000591474 SPRR1BP22528 89 aa12.24□□□□□ -0.45
CXXC1-216ENST00000591474 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
CXXC1-216ENST00000591474 DPM2O94777 84 aa12.23□□□□□ -0.45
CXXC1-216ENST00000591474 HINT1P49773 126 aaPredicted RBP12.23□□□□□ -0.45
CXXC1-216ENST00000591474 CBY1Q9Y3M2 126 aa12.23□□□□□ -0.45
CXXC1-216ENST00000591474 NPC2P61916 151 aa12.22□□□□□ -0.45
CXXC1-216ENST00000591474 SLC25A34Q6PIV7 304 aa12.21□□□□□ -0.45
CXXC1-216ENST00000591474 C9orf92A6NGG3 77 aa12.2□□□□□ -0.46
CXXC1-216ENST00000591474 IGKCP01834 107 aa12.2□□□□□ -0.46
CXXC1-216ENST00000591474 LINC00310P59036 64 aa12.2□□□□□ -0.46
CXXC1-216ENST00000591474 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
CXXC1-216ENST00000591474 HRCT1Q6UXD1 115 aa12.2□□□□□ -0.46
CXXC1-216ENST00000591474 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
CXXC1-216ENST00000591474 PMCHL2Q9BQD1 86 aa12.19□□□□□ -0.46
CXXC1-216ENST00000591474 HSPB8Q9UJY1 196 aa12.19□□□□□ -0.46
CXXC1-216ENST00000591474 SERF1AO75920 110 aa12.17□□□□□ -0.46
CXXC1-216ENST00000591474 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
CXXC1-216ENST00000591474 LORP23490 312 aaPredicted RBP12.16□□□□□ -0.46
CXXC1-216ENST00000591474 LAMTOR3Q9UHA4 124 aa12.16□□□□□ -0.46
CXXC1-216ENST00000591474 TRGC2P03986 189 aa12.14□□□□□ -0.47
CXXC1-216ENST00000591474 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
CXXC1-216ENST00000591474 FLGP20930 4061 aaPredicted RBP12.13□□□□□ -0.47
CXXC1-216ENST00000591474 KRTAP10-6P60371 365 aaPredicted RBP12.13□□□□□ -0.47
CXXC1-216ENST00000591474 E9PLD3 99 aa12.12□□□□□ -0.47
CXXC1-216ENST00000591474 FABP4P15090 132 aa12.12□□□□□ -0.47
CXXC1-216ENST00000591474 CD164Q04900 197 aa12.12□□□□□ -0.47
CXXC1-216ENST00000591474 OR13C6PQ8NH95 151 aa12.11□□□□□ -0.47
CXXC1-216ENST00000591474 LINC00308Q8TCZ7 52 aa12.1□□□□□ -0.47
CXXC1-216ENST00000591474 LITAFQ99732 161 aa12.1□□□□□ -0.47
CXXC1-216ENST00000591474 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
CXXC1-216ENST00000591474 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
CXXC1-216ENST00000591474 Q5XG85 94 aa12.07□□□□□ -0.48
CXXC1-216ENST00000591474 SLC7A5P1Q8MH63 180 aa12.07□□□□□ -0.48
CXXC1-216ENST00000591474 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
CXXC1-216ENST00000591474 TIMM17BO60830 172 aa12.06□□□□□ -0.48
CXXC1-216ENST00000591474 COX7BP24311 80 aa12.06□□□□□ -0.48
CXXC1-216ENST00000591474 Q1RN00 199 aa12.05□□□□□ -0.48
CXXC1-216ENST00000591474 TAL2Q16559 108 aa12.04□□□□□ -0.48
CXXC1-216ENST00000591474 H7C2G1 150 aa12.03□□□□□ -0.48
CXXC1-216ENST00000591474 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
CXXC1-216ENST00000591474 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.49
CXXC1-216ENST00000591474 RPL37P61927 97 aaKnown RBP12.02□□□□□ -0.49
CXXC1-216ENST00000591474 M0R2T5 61 aa12.01□□□□□ -0.49
CXXC1-216ENST00000591474 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
CXXC1-216ENST00000591474 DEFB105AQ8NG35 78 aa12.01□□□□□ -0.49
CXXC1-216ENST00000591474 LINC00518Q8N0U6 118 aa12□□□□□ -0.49
CXXC1-216ENST00000591474 AKR1D1P51857 326 aa11.99□□□□□ -0.49
CXXC1-216ENST00000591474 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
CXXC1-216ENST00000591474 TRBV7-6A0A0J9YX20 115 aa11.96□□□□□ -0.49
CXXC1-216ENST00000591474 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
CXXC1-216ENST00000591474 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
CXXC1-216ENST00000591474 COLCA2A8K830 154 aa11.94□□□□□ -0.5
CXXC1-216ENST00000591474 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
CXXC1-216ENST00000591474 IGLV5-48A0A075B6I7 105 aa11.93□□□□□ -0.5
CXXC1-216ENST00000591474 A0A1B0GWB2 263 aa11.92□□□□□ -0.5
CXXC1-216ENST00000591474 A0A0G2JQZ4 141 aa11.9□□□□□ -0.5
CXXC1-216ENST00000591474 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
CXXC1-216ENST00000591474 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
CXXC1-216ENST00000591474 TCL1BO95988 128 aa11.85□□□□□ -0.51
CXXC1-216ENST00000591474 PET117Q6UWS5 81 aa11.85□□□□□ -0.51
CXXC1-216ENST00000591474 A4D1N5 150 aa11.83□□□□□ -0.52
CXXC1-216ENST00000591474 COPS9Q8WXC6 57 aa11.83□□□□□ -0.52
CXXC1-216ENST00000591474 A6NDN8 102 aa11.8□□□□□ -0.52
CXXC1-216ENST00000591474 IFITM1P13164 125 aa11.8□□□□□ -0.52
CXXC1-216ENST00000591474 SCGB1D4Q6XE38 83 aa11.8□□□□□ -0.52
CXXC1-216ENST00000591474 NHP2Q9NX24 153 aaKnown RBP11.8□□□□□ -0.52
CXXC1-216ENST00000591474 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
CXXC1-216ENST00000591474 Q6ZVH6 145 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
CXXC1-216ENST00000591474 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
CXXC1-216ENST00000591474 F8WEM9 126 aa11.73□□□□□ -0.53
CXXC1-216ENST00000591474 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
CXXC1-216ENST00000591474 SMIM11BQ8TCY0 68 aa11.73□□□□□ -0.53
CXXC1-216ENST00000591474 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
CXXC1-216ENST00000591474 Q75L30 129 aa11.71□□□□□ -0.53
CXXC1-216ENST00000591474 ANKRD39Q53RE8 183 aa11.7□□□□□ -0.54
CXXC1-216ENST00000591474 PCP2Q8IVA1 136 aa11.7□□□□□ -0.54
CXXC1-216ENST00000591474 Q6Q795 121 aa11.69□□□□□ -0.54
CXXC1-216ENST00000591474 ATP11AUNQ6ZP68 121 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms