RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PRYO14603 147 aa12.97□□□□□ -0.33
R3HDM4-206ENST00000590454 S100A7L2Q5SY68 101 aa12.97□□□□□ -0.33
R3HDM4-206ENST00000590454 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.33
R3HDM4-206ENST00000590454 SPRR1AP35321 89 aa12.95□□□□□ -0.34
R3HDM4-206ENST00000590454 UBE2AP49459 152 aa12.95□□□□□ -0.34
R3HDM4-206ENST00000590454 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
R3HDM4-206ENST00000590454 KRTAP4-16G5E9R7 235 aaPredicted RBP12.94□□□□□ -0.34
R3HDM4-206ENST00000590454 H0Y9J4 135 aa12.94□□□□□ -0.34
R3HDM4-206ENST00000590454 OR13C6PQ8NH95 151 aa12.94□□□□□ -0.34
R3HDM4-206ENST00000590454 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
R3HDM4-206ENST00000590454 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
R3HDM4-206ENST00000590454 DIRC1Q969H9 104 aa12.93□□□□□ -0.34
R3HDM4-206ENST00000590454 HIGD1BQ9P298 99 aa12.93□□□□□ -0.34
R3HDM4-206ENST00000590454 LINC00518Q8N0U6 118 aa12.92□□□□□ -0.34
R3HDM4-206ENST00000590454 TRAV23DV6A0A075B6W5 121 aa12.91□□□□□ -0.34
R3HDM4-206ENST00000590454 A4D1N5 150 aa12.91□□□□□ -0.34
R3HDM4-206ENST00000590454 S100A12P80511 92 aa12.9□□□□□ -0.34
R3HDM4-206ENST00000590454 ETDCA0A1B0GVM5 59 aa12.88□□□□□ -0.35
R3HDM4-206ENST00000590454 A6NDN8 102 aa12.87□□□□□ -0.35
R3HDM4-206ENST00000590454 B5MCH6 92 aa12.87□□□□□ -0.35
R3HDM4-206ENST00000590454 ZNF73O43830 326 aaPredicted RBP12.87□□□□□ -0.35
R3HDM4-206ENST00000590454 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
R3HDM4-206ENST00000590454 C12orf57Q99622 126 aa12.87□□□□□ -0.35
R3HDM4-206ENST00000590454 KRTAP1-4P0C5Y4 121 aa12.86□□□□□ -0.35
R3HDM4-206ENST00000590454 SMIM6P0DI80 62 aa12.86□□□□□ -0.35
R3HDM4-206ENST00000590454 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
R3HDM4-206ENST00000590454 PRO1933Q9H354 126 aa12.84□□□□□ -0.35
R3HDM4-206ENST00000590454 UQCR10Q9UDW1 63 aa12.83□□□□□ -0.36
R3HDM4-206ENST00000590454 TRAV13-2A0A0B4J235 113 aa12.82□□□□□ -0.36
R3HDM4-206ENST00000590454 SMCR5Q8TEV8 140 aa12.82□□□□□ -0.36
R3HDM4-206ENST00000590454 Q9BRP9 147 aa12.81□□□□□ -0.36
R3HDM4-206ENST00000590454 ANAPC11Q9NYG5 84 aa12.81□□□□□ -0.36
R3HDM4-206ENST00000590454 TAL2Q16559 108 aa12.8□□□□□ -0.36
R3HDM4-206ENST00000590454 Q6ZRX8 168 aa12.8□□□□□ -0.36
R3HDM4-206ENST00000590454 CEND1Q8N111 149 aa12.8□□□□□ -0.36
R3HDM4-206ENST00000590454 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
R3HDM4-206ENST00000590454 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
R3HDM4-206ENST00000590454 CFC1BP0CG36 223 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 CFC1P0CG37 223 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 FXYD2P54710 66 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 PRR26Q8N8Z3 221 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 SMIM11BQ8TCY0 68 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
R3HDM4-206ENST00000590454 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
R3HDM4-206ENST00000590454 HSD52Q0P140 79 aa12.75□□□□□ -0.37
R3HDM4-206ENST00000590454 A0A087X002 238 aa12.73□□□□□ -0.37
R3HDM4-206ENST00000590454 COX7BP24311 80 aa12.73□□□□□ -0.37
R3HDM4-206ENST00000590454 ELOF1P60002 83 aaKnown RBP12.73□□□□□ -0.37
R3HDM4-206ENST00000590454 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
R3HDM4-206ENST00000590454 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
R3HDM4-206ENST00000590454 A0A0B4J2C4 111 aa12.7□□□□□ -0.38
R3HDM4-206ENST00000590454 H7C2G1 150 aa12.69□□□□□ -0.38
R3HDM4-206ENST00000590454 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
R3HDM4-206ENST00000590454 TRBV7-6A0A0J9YX20 115 aa12.68□□□□□ -0.38
R3HDM4-206ENST00000590454 ST20-AS1Q8NBB2 130 aa12.68□□□□□ -0.38
R3HDM4-206ENST00000590454 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
R3HDM4-206ENST00000590454 A0A1B0GWB2 263 aa12.66□□□□□ -0.38
R3HDM4-206ENST00000590454 A6NJY4 79 aa12.66□□□□□ -0.38
R3HDM4-206ENST00000590454 KRTAP13-2Q52LG2 175 aa12.66□□□□□ -0.38
R3HDM4-206ENST00000590454 LPAP08519 4548 aa12.65□□□□□ -0.38
R3HDM4-206ENST00000590454 K7ERJ3 54 aa12.65□□□□□ -0.38
R3HDM4-206ENST00000590454 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
R3HDM4-206ENST00000590454 DHRS4-AS1Q9P1J3 65 aa12.65□□□□□ -0.38
R3HDM4-206ENST00000590454 CRYGAP11844 174 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 CTAG1AP78358 180 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 FAM229BQ4G0N7 80 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 KRTAP9-2Q9BYQ4 174 aa12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 ZNF706Q9Y5V0 76 aaPredicted RBP12.64□□□□□ -0.39
R3HDM4-206ENST00000590454 PRO1854Q9UHT4 67 aa12.63□□□□□ -0.39
R3HDM4-206ENST00000590454 LINC00483Q53H64 154 aa12.61□□□□□ -0.39
R3HDM4-206ENST00000590454 C3orf22Q8N5N4 141 aa12.61□□□□□ -0.39
R3HDM4-206ENST00000590454 TSTD3H0UI37 97 aa12.59□□□□□ -0.39
R3HDM4-206ENST00000590454 VAMP3Q15836 100 aa12.58□□□□□ -0.4
R3HDM4-206ENST00000590454 LINC00575Q6W349 94 aa12.58□□□□□ -0.4
R3HDM4-206ENST00000590454 Q1RN00 199 aa12.57□□□□□ -0.4
R3HDM4-206ENST00000590454 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
R3HDM4-206ENST00000590454 A0A0U1RQV1 116 aa12.54□□□□□ -0.4
R3HDM4-206ENST00000590454 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
R3HDM4-206ENST00000590454 LINC01547P58512 204 aaPredicted RBP12.53□□□□□ -0.4
R3HDM4-206ENST00000590454 TRIAP1O43715 76 aa12.52□□□□□ -0.41
R3HDM4-206ENST00000590454 TSPAN13O95857 204 aa12.51□□□□□ -0.41
R3HDM4-206ENST00000590454 SPRR1BP22528 89 aa12.51□□□□□ -0.41
R3HDM4-206ENST00000590454 FAM218AQ96MZ4 157 aa12.51□□□□□ -0.41
R3HDM4-206ENST00000590454 IGLV9-49A0A0B4J1Y8 123 aa12.5□□□□□ -0.41
R3HDM4-206ENST00000590454 hADV29S1A0JD25 119 aa12.5□□□□□ -0.41
R3HDM4-206ENST00000590454 M0R143 59 aa12.49□□□□□ -0.41
R3HDM4-206ENST00000590454 SLC25A20O43772 301 aa12.49□□□□□ -0.41
R3HDM4-206ENST00000590454 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
R3HDM4-206ENST00000590454 MOBPQ13875 183 aa12.47□□□□□ -0.41
R3HDM4-206ENST00000590454 MUC2Q02817 5179 aa12.47□□□□□ -0.41
R3HDM4-206ENST00000590454 TEX49A0A1B0GTD5 131 aa12.46□□□□□ -0.41
R3HDM4-206ENST00000590454 Q6ZQY7 126 aa12.46□□□□□ -0.41
R3HDM4-206ENST00000590454 H0YGX0 51 aa12.45□□□□□ -0.42
R3HDM4-206ENST00000590454 SMIM29Q86T20 159 aa12.45□□□□□ -0.42
R3HDM4-206ENST00000590454 Q8N377 158 aa12.45□□□□□ -0.42
R3HDM4-206ENST00000590454 PSMB2P49721 201 aa12.44□□□□□ -0.42
R3HDM4-206ENST00000590454 CLEC2BQ92478 149 aa12.44□□□□□ -0.42
R3HDM4-206ENST00000590454 KRTAP9-6A0A140TA67 174 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms