RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SPATA45Q537H7 98 aa12.81□□□□□ -0.36
ATG4D-212ENST00000590096 MUSTN1Q8IVN3 82 aa12.81□□□□□ -0.36
ATG4D-212ENST00000590096 OR13C6PQ8NH95 151 aa12.81□□□□□ -0.36
ATG4D-212ENST00000590096 TRAV23DV6A0A075B6W5 121 aa12.8□□□□□ -0.36
ATG4D-212ENST00000590096 KRTAP1-4P0C5Y4 121 aa12.8□□□□□ -0.36
ATG4D-212ENST00000590096 HIGD2AQ9BW72 106 aa12.79□□□□□ -0.36
ATG4D-212ENST00000590096 TNXBP22105 4242 aa12.78□□□□□ -0.36
ATG4D-212ENST00000590096 KRTAP4-16G5E9R7 235 aaPredicted RBP12.77□□□□□ -0.37
ATG4D-212ENST00000590096 DLEU1O43261 78 aa12.76□□□□□ -0.37
ATG4D-212ENST00000590096 KRTAP10-8P60410 259 aa12.76□□□□□ -0.37
ATG4D-212ENST00000590096 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
ATG4D-212ENST00000590096 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-212ENST00000590096 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
ATG4D-212ENST00000590096 C14orf144Q96I85 54 aa12.75□□□□□ -0.37
ATG4D-212ENST00000590096 B5MCH6 92 aa12.73□□□□□ -0.37
ATG4D-212ENST00000590096 HMCN2Q8NDA2 5059 aa12.73□□□□□ -0.37
ATG4D-212ENST00000590096 RPL13AP40429 203 aaKnown RBP12.72□□□□□ -0.37
ATG4D-212ENST00000590096 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-212ENST00000590096 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
ATG4D-212ENST00000590096 Q6ZRX8 168 aa12.71□□□□□ -0.37
ATG4D-212ENST00000590096 HIST1H4GQ99525 98 aa12.71□□□□□ -0.37
ATG4D-212ENST00000590096 A6NDN8 102 aa12.7□□□□□ -0.38
ATG4D-212ENST00000590096 SMCR5Q8TEV8 140 aa12.69□□□□□ -0.38
ATG4D-212ENST00000590096 ZNF706Q9Y5V0 76 aaPredicted RBP12.69□□□□□ -0.38
ATG4D-212ENST00000590096 TRAV13-2A0A0B4J235 113 aa12.68□□□□□ -0.38
ATG4D-212ENST00000590096 CRYGAP11844 174 aa12.68□□□□□ -0.38
ATG4D-212ENST00000590096 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
ATG4D-212ENST00000590096 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
ATG4D-212ENST00000590096 A4D1N5 150 aa12.66□□□□□ -0.38
ATG4D-212ENST00000590096 FAM229BQ4G0N7 80 aa12.66□□□□□ -0.38
ATG4D-212ENST00000590096 A0A087X002 238 aa12.65□□□□□ -0.38
ATG4D-212ENST00000590096 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
ATG4D-212ENST00000590096 Q9BRP9 147 aa12.65□□□□□ -0.38
ATG4D-212ENST00000590096 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
ATG4D-212ENST00000590096 C6orf99Q4VX62 202 aa12.64□□□□□ -0.39
ATG4D-212ENST00000590096 COX7BP24311 80 aa12.61□□□□□ -0.39
ATG4D-212ENST00000590096 C2orf91Q6ZV80 131 aa12.61□□□□□ -0.39
ATG4D-212ENST00000590096 TYMSOSQ8TAI1 123 aa12.61□□□□□ -0.39
ATG4D-212ENST00000590096 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
ATG4D-212ENST00000590096 ELOF1P60002 83 aaKnown RBP12.59□□□□□ -0.39
ATG4D-212ENST00000590096 DHRS4-AS1Q9P1J3 65 aa12.59□□□□□ -0.39
ATG4D-212ENST00000590096 TRBV7-6A0A0J9YX20 115 aa12.58□□□□□ -0.4
ATG4D-212ENST00000590096 C12orf57Q99622 126 aa12.58□□□□□ -0.4
ATG4D-212ENST00000590096 TAL2Q16559 108 aa12.57□□□□□ -0.4
ATG4D-212ENST00000590096 KRTAP13-2Q52LG2 175 aa12.57□□□□□ -0.4
ATG4D-212ENST00000590096 GAGE2AQ6NT46 116 aa12.57□□□□□ -0.4
ATG4D-212ENST00000590096 SMIM11BQ8TCY0 68 aa12.57□□□□□ -0.4
ATG4D-212ENST00000590096 A0A1B0GWB2 263 aa12.56□□□□□ -0.4
ATG4D-212ENST00000590096 LINC00483Q53H64 154 aa12.54□□□□□ -0.4
ATG4D-212ENST00000590096 CEND1Q8N111 149 aa12.53□□□□□ -0.4
ATG4D-212ENST00000590096 C3orf22Q8N5N4 141 aa12.52□□□□□ -0.41
ATG4D-212ENST00000590096 RAB37Q96AX2 223 aa12.52□□□□□ -0.41
ATG4D-212ENST00000590096 UQCR10Q9UDW1 63 aa12.52□□□□□ -0.41
ATG4D-212ENST00000590096 TMEM238LA0A1B0GVL6 79 aa12.51□□□□□ -0.41
ATG4D-212ENST00000590096 A6NJY4 79 aa12.51□□□□□ -0.41
ATG4D-212ENST00000590096 VAMP3Q15836 100 aa12.51□□□□□ -0.41
ATG4D-212ENST00000590096 CFC1BP0CG36 223 aa12.49□□□□□ -0.41
ATG4D-212ENST00000590096 CFC1P0CG37 223 aa12.49□□□□□ -0.41
ATG4D-212ENST00000590096 ST20-AS1Q8NBB2 130 aa12.49□□□□□ -0.41
ATG4D-212ENST00000590096 A0A0B4J2C4 111 aa12.48□□□□□ -0.41
ATG4D-212ENST00000590096 HSD52Q0P140 79 aa12.48□□□□□ -0.41
ATG4D-212ENST00000590096 NHP2Q9NX24 153 aaKnown RBP12.48□□□□□ -0.41
ATG4D-212ENST00000590096 LINC00304Q8N9R0 145 aa12.47□□□□□ -0.41
ATG4D-212ENST00000590096 SMIM6P0DI80 62 aa12.46□□□□□ -0.41
ATG4D-212ENST00000590096 H7C2G1 150 aa12.45□□□□□ -0.42
ATG4D-212ENST00000590096 SLC25A20O43772 301 aa12.45□□□□□ -0.42
ATG4D-212ENST00000590096 FXYD2P54710 66 aa12.45□□□□□ -0.42
ATG4D-212ENST00000590096 IGLV9-49A0A0B4J1Y8 123 aa12.44□□□□□ -0.42
ATG4D-212ENST00000590096 TSPAN13O95857 204 aa12.43□□□□□ -0.42
ATG4D-212ENST00000590096 BVES-AS1Q5T3Y7 98 aa12.43□□□□□ -0.42
ATG4D-212ENST00000590096 Q1RN00 199 aa12.41□□□□□ -0.42
ATG4D-212ENST00000590096 SPRR1BP22528 89 aa12.4□□□□□ -0.42
ATG4D-212ENST00000590096 MOBPQ13875 183 aa12.4□□□□□ -0.42
ATG4D-212ENST00000590096 DEFB105AQ8NG35 78 aa12.4□□□□□ -0.42
ATG4D-212ENST00000590096 PRO1933Q9H354 126 aa12.4□□□□□ -0.42
ATG4D-212ENST00000590096 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
ATG4D-212ENST00000590096 LINC00575Q6W349 94 aa12.39□□□□□ -0.43
ATG4D-212ENST00000590096 Q8NBF4 154 aa12.39□□□□□ -0.43
ATG4D-212ENST00000590096 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
ATG4D-212ENST00000590096 TEX49A0A1B0GTD5 131 aa12.38□□□□□ -0.43
ATG4D-212ENST00000590096 C4orf48Q5BLP8 95 aa12.38□□□□□ -0.43
ATG4D-212ENST00000590096 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
ATG4D-212ENST00000590096 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
ATG4D-212ENST00000590096 SPAG11AQ6PDA7 123 aa12.37□□□□□ -0.43
ATG4D-212ENST00000590096 SSBP3-AS1Q7Z2R9 100 aa12.37□□□□□ -0.43
ATG4D-212ENST00000590096 hADV29S1A0JD25 119 aa12.36□□□□□ -0.43
ATG4D-212ENST00000590096 IGLV5-48A0A075B6I7 105 aa12.34□□□□□ -0.43
ATG4D-212ENST00000590096 CTAG1AP78358 180 aa12.34□□□□□ -0.43
ATG4D-212ENST00000590096 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-212ENST00000590096 LRP2P98164 4655 aa12.32□□□□□ -0.44
ATG4D-212ENST00000590096 H0YGX0 51 aa12.31□□□□□ -0.44
ATG4D-212ENST00000590096 SNCGO76070 127 aa12.31□□□□□ -0.44
ATG4D-212ENST00000590096 Q6ZQY7 126 aa12.31□□□□□ -0.44
ATG4D-212ENST00000590096 K7ERJ3 54 aa12.3□□□□□ -0.44
ATG4D-212ENST00000590096 SPINK1P00995 79 aa12.28□□□□□ -0.44
ATG4D-212ENST00000590096 PRR4Q16378 134 aa12.28□□□□□ -0.44
ATG4D-212ENST00000590096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.28□□□□□ -0.44
ATG4D-212ENST00000590096 Q8N377 158 aa12.28□□□□□ -0.44
ATG4D-212ENST00000590096 TSTD3H0UI37 97 aa12.27□□□□□ -0.45
ATG4D-212ENST00000590096 SMIM29Q86T20 159 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms