RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
NEDD4L-227ENST00000590020 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
NEDD4L-227ENST00000590020 JOSD1Q15040 202 aaPredicted RBP6.54□□□□□ -1.36
NEDD4L-227ENST00000590020 BAGE3Q86Y29 109 aa6.54□□□□□ -1.36
NEDD4L-227ENST00000590020 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
NEDD4L-227ENST00000590020 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
NEDD4L-227ENST00000590020 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
NEDD4L-227ENST00000590020 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
NEDD4L-227ENST00000590020 A0A0G2JQZ4 141 aa6.52□□□□□ -1.37
NEDD4L-227ENST00000590020 Q1RN00 199 aa6.51□□□□□ -1.37
NEDD4L-227ENST00000590020 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
NEDD4L-227ENST00000590020 S100A7L2Q5SY68 101 aa6.51□□□□□ -1.37
NEDD4L-227ENST00000590020 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 SPRR1BP22528 89 aa6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 SMIM29Q86T20 159 aa6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 LAMTOR3Q9UHA4 124 aa6.5□□□□□ -1.37
NEDD4L-227ENST00000590020 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
NEDD4L-227ENST00000590020 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
NEDD4L-227ENST00000590020 CD164Q04900 197 aa6.49□□□□□ -1.37
NEDD4L-227ENST00000590020 C20orf202A1L168 122 aa6.48□□□□□ -1.37
NEDD4L-227ENST00000590020 HERV-K104P63124 156 aa6.48□□□□□ -1.37
NEDD4L-227ENST00000590020 SLC25A34Q6PIV7 304 aa6.48□□□□□ -1.37
NEDD4L-227ENST00000590020 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
NEDD4L-227ENST00000590020 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
NEDD4L-227ENST00000590020 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
NEDD4L-227ENST00000590020 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
NEDD4L-227ENST00000590020 MAP1LC3CQ9BXW4 147 aa6.47□□□□□ -1.37
NEDD4L-227ENST00000590020 PRO1933Q9H354 126 aa6.47□□□□□ -1.37
NEDD4L-227ENST00000590020 LOC107984156A0A0G2JMH3 177 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 HBDP02042 147 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 Q5XG85 94 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 ARL17AQ8IVW1 177 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 DEFB105AQ8NG35 78 aa6.46□□□□□ -1.38
NEDD4L-227ENST00000590020 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
NEDD4L-227ENST00000590020 NEBP20929 6669 aa6.45□□□□□ -1.38
NEDD4L-227ENST00000590020 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
NEDD4L-227ENST00000590020 LINC00587B1AMM8 73 aa6.44□□□□□ -1.38
NEDD4L-227ENST00000590020 NPC2P61916 151 aa6.44□□□□□ -1.38
NEDD4L-227ENST00000590020 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
NEDD4L-227ENST00000590020 RPS10P5Q9NQ39 176 aa6.44□□□□□ -1.38
NEDD4L-227ENST00000590020 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
NEDD4L-227ENST00000590020 LINC00614P0C842 121 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 AKR1D1P51857 326 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 TAL2Q16559 108 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 OBSCN-AS1Q96MR7 158 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 MIEN1Q9BRT3 115 aa6.42□□□□□ -1.38
NEDD4L-227ENST00000590020 HINT1P49773 126 aaPredicted RBP6.41□□□□□ -1.38
NEDD4L-227ENST00000590020 NDUFC2O95298 119 aa6.4□□□□□ -1.38
NEDD4L-227ENST00000590020 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.38
NEDD4L-227ENST00000590020 Q75L30 129 aa6.4□□□□□ -1.38
NEDD4L-227ENST00000590020 DHRS4-AS1Q9P1J3 65 aa6.4□□□□□ -1.38
NEDD4L-227ENST00000590020 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
NEDD4L-227ENST00000590020 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
NEDD4L-227ENST00000590020 TRBV20-1A0A075B6N2 111 aa6.37□□□□□ -1.39
NEDD4L-227ENST00000590020 TRAV12-1A0A0B4J245 112 aa6.37□□□□□ -1.39
NEDD4L-227ENST00000590020 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
NEDD4L-227ENST00000590020 TCL1BO95988 128 aa6.36□□□□□ -1.39
NEDD4L-227ENST00000590020 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
NEDD4L-227ENST00000590020 SEC11CQ9BY50 192 aa6.36□□□□□ -1.39
NEDD4L-227ENST00000590020 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
NEDD4L-227ENST00000590020 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
NEDD4L-227ENST00000590020 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 LEPROTO15243 131 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 COX7BP24311 80 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 S100PP25815 95 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.39
NEDD4L-227ENST00000590020 H0Y8G0 127 aa6.33□□□□□ -1.4
NEDD4L-227ENST00000590020 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
NEDD4L-227ENST00000590020 LGALS3P17931 250 aaKnown RBP6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 RHEBQ15382 184 aa6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 Q96NJ1 140 aa6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
NEDD4L-227ENST00000590020 J3QQQ9 107 aa6.31□□□□□ -1.4
NEDD4L-227ENST00000590020 COX19Q49B96 90 aa6.31□□□□□ -1.4
NEDD4L-227ENST00000590020 C6orf99Q4VX62 202 aa6.3□□□□□ -1.4
NEDD4L-227ENST00000590020 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
NEDD4L-227ENST00000590020 IFITM2Q01629 132 aa6.29□□□□□ -1.4
NEDD4L-227ENST00000590020 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
NEDD4L-227ENST00000590020 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
NEDD4L-227ENST00000590020 A0A0J9YXY3 114 aa6.26□□□□□ -1.41
NEDD4L-227ENST00000590020 NMUP48645 174 aa6.26□□□□□ -1.41
NEDD4L-227ENST00000590020 IGFL1Q6UW32 110 aa6.25□□□□□ -1.41
NEDD4L-227ENST00000590020 SPANXCQ9NY87 97 aa6.25□□□□□ -1.41
NEDD4L-227ENST00000590020 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
NEDD4L-227ENST00000590020 LINC00308Q8TCZ7 52 aa6.24□□□□□ -1.41
NEDD4L-227ENST00000590020 PMCHL2Q9BQD1 86 aa6.24□□□□□ -1.41
NEDD4L-227ENST00000590020 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
NEDD4L-227ENST00000590020 A8MUU9 505 aa6.23□□□□□ -1.41
NEDD4L-227ENST00000590020 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
NEDD4L-227ENST00000590020 TMEM218A2RU14 115 aa6.21□□□□□ -1.42
NEDD4L-227ENST00000590020 HERVK_113P61574 105 aa6.21□□□□□ -1.42
NEDD4L-227ENST00000590020 LINC00518Q8N0U6 118 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms