RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
PRKCSH-210ENST00000589990 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
PRKCSH-210ENST00000589990 NPC2P61916 151 aa7.16□□□□□ -1.26
PRKCSH-210ENST00000589990 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
PRKCSH-210ENST00000589990 MIEN1Q9BRT3 115 aa7.16□□□□□ -1.26
PRKCSH-210ENST00000589990 VPREB1P12018 145 aa7.15□□□□□ -1.26
PRKCSH-210ENST00000589990 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.26
PRKCSH-210ENST00000589990 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 TIMM17BO60830 172 aa7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 CTAG1AP78358 180 aa7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 Q8NDZ9 215 aa7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 VAMP8Q9BV40 100 aa7.14□□□□□ -1.27
PRKCSH-210ENST00000589990 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
PRKCSH-210ENST00000589990 TMEM238C9JI98 176 aa7.13□□□□□ -1.27
PRKCSH-210ENST00000589990 LITAFQ99732 161 aa7.13□□□□□ -1.27
PRKCSH-210ENST00000589990 PAM16Q9Y3D7 125 aa7.13□□□□□ -1.27
PRKCSH-210ENST00000589990 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
PRKCSH-210ENST00000589990 M0R378 163 aa7.12□□□□□ -1.27
PRKCSH-210ENST00000589990 SPATA45Q537H7 98 aa7.12□□□□□ -1.27
PRKCSH-210ENST00000589990 FAM19A1Q7Z5A9 133 aa7.12□□□□□ -1.27
PRKCSH-210ENST00000589990 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
PRKCSH-210ENST00000589990 NCR3O14931 201 aa7.11□□□□□ -1.27
PRKCSH-210ENST00000589990 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
PRKCSH-210ENST00000589990 PYY3Q5JQD4 70 aa7.11□□□□□ -1.27
PRKCSH-210ENST00000589990 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
PRKCSH-210ENST00000589990 LINC00308Q8TCZ7 52 aa7.11□□□□□ -1.27
PRKCSH-210ENST00000589990 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
PRKCSH-210ENST00000589990 COX8AP10176 69 aa7.1□□□□□ -1.27
PRKCSH-210ENST00000589990 SPAG11AQ6PDA7 123 aa7.1□□□□□ -1.27
PRKCSH-210ENST00000589990 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
PRKCSH-210ENST00000589990 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
PRKCSH-210ENST00000589990 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
PRKCSH-210ENST00000589990 SPANXDQ9BXN6 97 aa7.09□□□□□ -1.27
PRKCSH-210ENST00000589990 SPANXCQ9NY87 97 aa7.09□□□□□ -1.27
PRKCSH-210ENST00000589990 NDUFC2O95298 119 aa7.08□□□□□ -1.28
PRKCSH-210ENST00000589990 Q6ZVH6 145 aa7.08□□□□□ -1.28
PRKCSH-210ENST00000589990 Q8NBF4 154 aa7.08□□□□□ -1.28
PRKCSH-210ENST00000589990 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
PRKCSH-210ENST00000589990 IFITM1P13164 125 aa7.07□□□□□ -1.28
PRKCSH-210ENST00000589990 S100A7L2Q5SY68 101 aa7.07□□□□□ -1.28
PRKCSH-210ENST00000589990 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
PRKCSH-210ENST00000589990 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
PRKCSH-210ENST00000589990 TRBV10-3A0A0K0K1G6 114 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 TRBV10-2A0A0K0K1G8 114 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 DLEU1O43261 78 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 XP32Q5T750 250 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 SLC25A34Q6PIV7 304 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 HIGD2AQ9BW72 106 aa7.06□□□□□ -1.28
PRKCSH-210ENST00000589990 DDTP30046 118 aa7.05□□□□□ -1.28
PRKCSH-210ENST00000589990 S100A12P80511 92 aa7.05□□□□□ -1.28
PRKCSH-210ENST00000589990 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
PRKCSH-210ENST00000589990 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
PRKCSH-210ENST00000589990 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
PRKCSH-210ENST00000589990 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
PRKCSH-210ENST00000589990 PRYO14603 147 aa7.02□□□□□ -1.29
PRKCSH-210ENST00000589990 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
PRKCSH-210ENST00000589990 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
PRKCSH-210ENST00000589990 Q8N377 158 aa7.01□□□□□ -1.29
PRKCSH-210ENST00000589990 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
PRKCSH-210ENST00000589990 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
PRKCSH-210ENST00000589990 A6NDN8 102 aa7□□□□□ -1.29
PRKCSH-210ENST00000589990 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 A4D1N5 150 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 SPINK1P00995 79 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 PCOTHQ58A44 107 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 CBY1Q9Y3M2 126 aa6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
PRKCSH-210ENST00000589990 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
PRKCSH-210ENST00000589990 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
PRKCSH-210ENST00000589990 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
PRKCSH-210ENST00000589990 SPRR1AP35321 89 aa6.97□□□□□ -1.29
PRKCSH-210ENST00000589990 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
PRKCSH-210ENST00000589990 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.3
PRKCSH-210ENST00000589990 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
PRKCSH-210ENST00000589990 HINT1P49773 126 aaPredicted RBP6.96□□□□□ -1.3
PRKCSH-210ENST00000589990 C12orf57Q99622 126 aa6.96□□□□□ -1.3
PRKCSH-210ENST00000589990 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
PRKCSH-210ENST00000589990 B5MCH6 92 aa6.95□□□□□ -1.3
PRKCSH-210ENST00000589990 KRTAP4-16G5E9R7 235 aaPredicted RBP6.95□□□□□ -1.3
PRKCSH-210ENST00000589990 M0R2T5 61 aa6.95□□□□□ -1.3
PRKCSH-210ENST00000589990 TAL2Q16559 108 aa6.95□□□□□ -1.3
PRKCSH-210ENST00000589990 MOBPQ13875 183 aa6.94□□□□□ -1.3
PRKCSH-210ENST00000589990 CEND1Q8N111 149 aa6.94□□□□□ -1.3
PRKCSH-210ENST00000589990 USH2AO75445 5202 aa6.93□□□□□ -1.3
PRKCSH-210ENST00000589990 C6orf99Q4VX62 202 aa6.93□□□□□ -1.3
PRKCSH-210ENST00000589990 SMCR5Q8TEV8 140 aa6.93□□□□□ -1.3
PRKCSH-210ENST00000589990 ZNF706Q9Y5V0 76 aaPredicted RBP6.93□□□□□ -1.3
PRKCSH-210ENST00000589990 IGLV9-49A0A0B4J1Y8 123 aa6.92□□□□□ -1.3
PRKCSH-210ENST00000589990 Q6ZRX8 168 aa6.92□□□□□ -1.3
PRKCSH-210ENST00000589990 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
PRKCSH-210ENST00000589990 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
PRKCSH-210ENST00000589990 A6NJY4 79 aa6.91□□□□□ -1.3
PRKCSH-210ENST00000589990 SLC25A20O43772 301 aa6.91□□□□□ -1.3
PRKCSH-210ENST00000589990 HSD52Q0P140 79 aa6.91□□□□□ -1.3
PRKCSH-210ENST00000589990 LINC00483Q53H64 154 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms