RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GTF2H5Q6ZYL4 71 aa14.02□□□□□ -0.16
ATG4D-209ENST00000588857 PHF5AQ7RTV0 110 aaKnown RBP14.02□□□□□ -0.16
ATG4D-209ENST00000588857 DIRC1Q969H9 104 aa14.02□□□□□ -0.16
ATG4D-209ENST00000588857 K7EP34 96 aa14.01□□□□□ -0.17
ATG4D-209ENST00000588857 PRYO14603 147 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 KRTAP10-1P60331 282 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 EPM2AB3EWF7 344 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 TCL1BO95988 128 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 UBE2BP63146 152 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 CLEC2BQ92478 149 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 PLAC8Q9NZF1 115 aa14□□□□□ -0.17
ATG4D-209ENST00000588857 ATXN8Q156A1 80 aa13.98□□□□□ -0.17
ATG4D-209ENST00000588857 DNAH5Q8TE73 4624 aa13.97□□□□□ -0.17
ATG4D-209ENST00000588857 TRBV7-6A0A0J9YX20 115 aa13.96□□□□□ -0.18
ATG4D-209ENST00000588857 FAM30AQ9NZY2 134 aa13.96□□□□□ -0.18
ATG4D-209ENST00000588857 REG3GQ6UW15 175 aa13.95□□□□□ -0.18
ATG4D-209ENST00000588857 Q6ZSA8 131 aa13.95□□□□□ -0.18
ATG4D-209ENST00000588857 H3BMG7 143 aa13.94□□□□□ -0.18
ATG4D-209ENST00000588857 LST1O00453 97 aa13.94□□□□□ -0.18
ATG4D-209ENST00000588857 COX7BP24311 80 aa13.94□□□□□ -0.18
ATG4D-209ENST00000588857 UBE2V1Q13404 147 aa13.94□□□□□ -0.18
ATG4D-209ENST00000588857 FAM218AQ96MZ4 157 aa13.92□□□□□ -0.18
ATG4D-209ENST00000588857 ETDCA0A1B0GVM5 59 aa13.92□□□□□ -0.18
ATG4D-209ENST00000588857 SPRR1AP35321 89 aa13.92□□□□□ -0.18
ATG4D-209ENST00000588857 ELOF1P60002 83 aaKnown RBP13.92□□□□□ -0.18
ATG4D-209ENST00000588857 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
ATG4D-209ENST00000588857 HERC2O95714 4834 aa13.9□□□□□ -0.18
ATG4D-209ENST00000588857 SNCGO76070 127 aa13.9□□□□□ -0.18
ATG4D-209ENST00000588857 CIRBP-AS1Q8TBR5 109 aa13.9□□□□□ -0.18
ATG4D-209ENST00000588857 KIAA1109Q2LD37 5005 aa13.9□□□□□ -0.18
ATG4D-209ENST00000588857 TRACP01848 142 aa13.88□□□□□ -0.19
ATG4D-209ENST00000588857 LINC00575Q6W349 94 aa13.88□□□□□ -0.19
ATG4D-209ENST00000588857 KRTAP11-1Q8IUC1 163 aa13.88□□□□□ -0.19
ATG4D-209ENST00000588857 KRTAP4-16G5E9R7 235 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-209ENST00000588857 SLC25A20O43772 301 aa13.88□□□□□ -0.19
ATG4D-209ENST00000588857 SCXQ7RTU7 201 aa13.88□□□□□ -0.19
ATG4D-209ENST00000588857 LINC00528Q8N1L1 170 aa13.87□□□□□ -0.19
ATG4D-209ENST00000588857 A0A1B0GX51 115 aa13.86□□□□□ -0.19
ATG4D-209ENST00000588857 DNAL4O96015 105 aa13.86□□□□□ -0.19
ATG4D-209ENST00000588857 hADV29S1A0JD25 119 aa13.85□□□□□ -0.19
ATG4D-209ENST00000588857 B5MCH6 92 aa13.85□□□□□ -0.19
ATG4D-209ENST00000588857 Q6ZRX8 168 aa13.85□□□□□ -0.19
ATG4D-209ENST00000588857 C9JAW5 83 aa13.84□□□□□ -0.19
ATG4D-209ENST00000588857 FAM19A1Q7Z5A9 133 aa13.83□□□□□ -0.19
ATG4D-209ENST00000588857 DNAH8Q96JB1 4490 aa13.82□□□□□ -0.2
ATG4D-209ENST00000588857 INAFM2P0DMQ5 153 aa13.81□□□□□ -0.2
ATG4D-209ENST00000588857 HAMPP81172 84 aa13.81□□□□□ -0.2
ATG4D-209ENST00000588857 MTURNQ8N3F0 131 aa13.81□□□□□ -0.2
ATG4D-209ENST00000588857 DHRS4-AS1Q9P1J3 65 aa13.8□□□□□ -0.2
ATG4D-209ENST00000588857 BCE1O60756 84 aa13.79□□□□□ -0.2
ATG4D-209ENST00000588857 F8W1H4 67 aa13.79□□□□□ -0.2
ATG4D-209ENST00000588857 CDK2AP2O75956 126 aa13.79□□□□□ -0.2
ATG4D-209ENST00000588857 PSORS1C2Q9UIG4 136 aa13.79□□□□□ -0.2
ATG4D-209ENST00000588857 HSPG2P98160 4391 aa13.78□□□□□ -0.2
ATG4D-209ENST00000588857 UBE2AP49459 152 aa13.77□□□□□ -0.21
ATG4D-209ENST00000588857 PRLHP81277 87 aa13.77□□□□□ -0.21
ATG4D-209ENST00000588857 PRO0461Q9UI25 63 aa13.77□□□□□ -0.21
ATG4D-209ENST00000588857 Q9BRP9 147 aa13.76□□□□□ -0.21
ATG4D-209ENST00000588857 H0Y9J4 135 aa13.75□□□□□ -0.21
ATG4D-209ENST00000588857 RYR1P21817 5038 aa13.75□□□□□ -0.21
ATG4D-209ENST00000588857 APOBP04114 4563 aaKnown RBP13.75□□□□□ -0.21
ATG4D-209ENST00000588857 ORMDL1Q9P0S3 153 aa13.75□□□□□ -0.21
ATG4D-209ENST00000588857 C1orf137Q5JT78 98 aa13.74□□□□□ -0.21
ATG4D-209ENST00000588857 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-209ENST00000588857 Q6ZQY7 126 aa13.74□□□□□ -0.21
ATG4D-209ENST00000588857 BAALC-AS2P0C853 105 aa13.73□□□□□ -0.21
ATG4D-209ENST00000588857 H3BT86 120 aa13.72□□□□□ -0.21
ATG4D-209ENST00000588857 ANKRD29Q8N6D5 301 aa13.72□□□□□ -0.21
ATG4D-209ENST00000588857 SMCPP49901 116 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-209ENST00000588857 SMCR5Q8TEV8 140 aa13.71□□□□□ -0.21
ATG4D-209ENST00000588857 HIGD2AQ9BW72 106 aa13.71□□□□□ -0.21
ATG4D-209ENST00000588857 GHRHP01286 108 aa13.69□□□□□ -0.22
ATG4D-209ENST00000588857 OCIAD2Q56VL3 154 aa13.69□□□□□ -0.22
ATG4D-209ENST00000588857 XGP55808 180 aa13.68□□□□□ -0.22
ATG4D-209ENST00000588857 KRTAP13-1Q8IUC0 172 aa13.68□□□□□ -0.22
ATG4D-209ENST00000588857 ERC2-IT1O76042 136 aa13.67□□□□□ -0.22
ATG4D-209ENST00000588857 H3BQ85 93 aa13.66□□□□□ -0.22
ATG4D-209ENST00000588857 TMEM256-PLSCR3K7ERE1 68 aa13.66□□□□□ -0.22
ATG4D-209ENST00000588857 LINC01600Q96MT4 127 aa13.66□□□□□ -0.22
ATG4D-209ENST00000588857 KRTAP17-1Q9BYP8 105 aa13.66□□□□□ -0.22
ATG4D-209ENST00000588857 IGLV7-43P04211 117 aa13.63□□□□□ -0.23
ATG4D-209ENST00000588857 DEFB105AQ8NG35 78 aa13.63□□□□□ -0.23
ATG4D-209ENST00000588857 ZNF861PO60384 105 aa13.62□□□□□ -0.23
ATG4D-209ENST00000588857 ST20-AS1Q8NBB2 130 aa13.62□□□□□ -0.23
ATG4D-209ENST00000588857 SRRM2Q9UQ35 2752 aaKnown RBP13.62□□□□□ -0.23
ATG4D-209ENST00000588857 ETDBQ3ZM63 59 aa13.62□□□□□ -0.23
ATG4D-209ENST00000588857 KRTAP4-5Q9BYR2 181 aa13.61□□□□□ -0.23
ATG4D-209ENST00000588857 Q8N1X5 172 aa13.59□□□□□ -0.23
ATG4D-209ENST00000588857 TEN1Q86WV5 123 aa13.58□□□□□ -0.23
ATG4D-209ENST00000588857 PPDPFLQ8WWR9 84 aa13.58□□□□□ -0.23
ATG4D-209ENST00000588857 IGLV5-48A0A075B6I7 105 aa13.58□□□□□ -0.24
ATG4D-209ENST00000588857 SMR3BP02814 79 aaPredicted RBP13.57□□□□□ -0.24
ATG4D-209ENST00000588857 LINC01547P58512 204 aaPredicted RBP13.56□□□□□ -0.24
ATG4D-209ENST00000588857 Q8N377 158 aa13.56□□□□□ -0.24
ATG4D-209ENST00000588857 TEX49A0A1B0GTD5 131 aa13.55□□□□□ -0.24
ATG4D-209ENST00000588857 LAMTOR3Q9UHA4 124 aa13.55□□□□□ -0.24
ATG4D-209ENST00000588857 RPL37AP61513 92 aaKnown RBP13.54□□□□□ -0.24
ATG4D-209ENST00000588857 ZNF706Q9Y5V0 76 aaPredicted RBP13.52□□□□□ -0.25
ATG4D-209ENST00000588857 NDUFV3P56181 108 aaKnown RBP13.51□□□□□ -0.25
ATG4D-209ENST00000588857 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms