RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
SDF2-206ENST00000587788 Q9HAA7 133 aa3.82□□□□□ -1.8
SDF2-206ENST00000587788 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
SDF2-206ENST00000587788 ALMS1Q8TCU4 4167 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 NDUFV3P56181 108 aaKnown RBP3.81□□□□□ -1.8
SDF2-206ENST00000587788 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
SDF2-206ENST00000587788 C10orf25Q5T742 122 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 LINC00575Q6W349 94 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 RMI2Q96E14 147 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 CAMK2N2Q96S95 79 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 UPK3BQ9BT76 320 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 C6orf48Q9UBA6 75 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
SDF2-206ENST00000587788 hADV29S1A0JD25 119 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 NDUFC2-KCTD14E9PQ53 114 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 M0R378 163 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 NCR3O14931 201 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 PDE6GP18545 87 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 C6orf99Q4VX62 202 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
SDF2-206ENST00000587788 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
SDF2-206ENST00000587788 CCKP06307 115 aa3.79□□□□□ -1.8
SDF2-206ENST00000587788 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
SDF2-206ENST00000587788 DIRC1Q969H9 104 aa3.79□□□□□ -1.8
SDF2-206ENST00000587788 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
SDF2-206ENST00000587788 IGKV2D-24A0A075B6R9 120 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
SDF2-206ENST00000587788 COX7BP24311 80 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
SDF2-206ENST00000587788 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
SDF2-206ENST00000587788 C15orf56Q8N910 161 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 C14orf132Q9NPU4 83 aa3.78□□□□□ -1.8
SDF2-206ENST00000587788 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 TLX1NBP0CAT3 122 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 VPREB1P12018 145 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 RBM3P98179 157 aaKnown RBP3.77□□□□□ -1.81
SDF2-206ENST00000587788 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 Q6JHZ5 121 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 Q6ZRU5 148 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 UBE2DNLQ8IWF7 75 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 Q8NDZ9 215 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 LINC00526Q96FQ7 95 aa3.77□□□□□ -1.81
SDF2-206ENST00000587788 LY6G6CO95867 125 aa3.76□□□□□ -1.81
SDF2-206ENST00000587788 ELOF1P60002 83 aaKnown RBP3.76□□□□□ -1.81
SDF2-206ENST00000587788 MPLKIPQ8TAP9 179 aa3.76□□□□□ -1.81
SDF2-206ENST00000587788 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
SDF2-206ENST00000587788 XAGE1AQ9HD64 81 aa3.76□□□□□ -1.81
SDF2-206ENST00000587788 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
SDF2-206ENST00000587788 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
SDF2-206ENST00000587788 KMT2AQ03164 3969 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 NKAPP1Q8N9T2 125 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 UBL5Q9BZL1 73 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 LAMTOR3Q9UHA4 124 aa3.75□□□□□ -1.81
SDF2-206ENST00000587788 DNAH6Q9C0G6 4158 aa3.74□□□□□ -1.81
SDF2-206ENST00000587788 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
SDF2-206ENST00000587788 Q6ZQY7 126 aa3.74□□□□□ -1.81
SDF2-206ENST00000587788 Q6ZRP5 223 aa3.74□□□□□ -1.81
SDF2-206ENST00000587788 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
SDF2-206ENST00000587788 FAM236AA0A1B0GUQ0 79 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 FAM236BA0A1B0GV22 79 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 ATOX1O00244 68 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 Q6ZQT0 140 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 PKIGQ9Y2B9 76 aa3.73□□□□□ -1.81
SDF2-206ENST00000587788 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 LOC107984640A0A0U1RRK4 108 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 A0A1B0GW54 56 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 HIST1H4AP62805 103 aaKnown RBP3.72□□□□□ -1.81
SDF2-206ENST00000587788 C14orf177Q52M58 125 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
SDF2-206ENST00000587788 TRBV7-4A0A0J9YYF1 115 aa3.71□□□□□ -1.82
SDF2-206ENST00000587788 UQCRQO14949 82 aa3.71□□□□□ -1.82
SDF2-206ENST00000587788 PSCAO43653 123 aa3.71□□□□□ -1.82
SDF2-206ENST00000587788 BCE1O60756 84 aa3.71□□□□□ -1.82
SDF2-206ENST00000587788 CXCL6P80162 114 aa3.7□□□□□ -1.82
SDF2-206ENST00000587788 C3orf22Q8N5N4 141 aa3.7□□□□□ -1.82
SDF2-206ENST00000587788 C7orf33Q8WU49 177 aa3.7□□□□□ -1.82
SDF2-206ENST00000587788 IGLV1-50A0A075B6I6 118 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 ETDCA0A1B0GVM5 59 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 M0R2N4 97 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 COX7CP15954 63 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 SPRR1AP35321 89 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
SDF2-206ENST00000587788 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
SDF2-206ENST00000587788 DNAH10Q8IVF4 4471 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms