RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 SCGB1D4Q6XE38 83 aa14.12□□□□□ -0.15
ERCC2-209ENST00000586856 ZNF706Q9Y5V0 76 aaPredicted RBP14.12□□□□□ -0.15
ERCC2-209ENST00000586856 TRAV23DV6A0A075B6W5 121 aa14.11□□□□□ -0.15
ERCC2-209ENST00000586856 SMCR5Q8TEV8 140 aa14.11□□□□□ -0.15
ERCC2-209ENST00000586856 PCP2Q8IVA1 136 aa14.09□□□□□ -0.15
ERCC2-209ENST00000586856 Q6ZRX8 168 aa14.08□□□□□ -0.16
ERCC2-209ENST00000586856 SPANXDQ9BXN6 97 aa14.08□□□□□ -0.16
ERCC2-209ENST00000586856 TSPAN13O95857 204 aa14.07□□□□□ -0.16
ERCC2-209ENST00000586856 SNRPEP62304 92 aaKnown RBP14.07□□□□□ -0.16
ERCC2-209ENST00000586856 ZNF73O43830 326 aaPredicted RBP14.06□□□□□ -0.16
ERCC2-209ENST00000586856 C3orf22Q8N5N4 141 aa14.05□□□□□ -0.16
ERCC2-209ENST00000586856 LINC00304Q8N9R0 145 aa14.04□□□□□ -0.16
ERCC2-209ENST00000586856 Q9BRP9 147 aa14.04□□□□□ -0.16
ERCC2-209ENST00000586856 ERC2-IT1O76042 136 aa14.03□□□□□ -0.16
ERCC2-209ENST00000586856 OR13C6PQ8NH95 151 aa14.03□□□□□ -0.16
ERCC2-209ENST00000586856 CBY1Q9Y3M2 126 aa14.03□□□□□ -0.16
ERCC2-209ENST00000586856 PPDPFQ9H3Y8 114 aa14.02□□□□□ -0.17
ERCC2-209ENST00000586856 HSBP1L1C9JCN9 74 aa14□□□□□ -0.17
ERCC2-209ENST00000586856 JOSD1Q15040 202 aaPredicted RBP14□□□□□ -0.17
ERCC2-209ENST00000586856 COPS9Q8WXC6 57 aa14□□□□□ -0.17
ERCC2-209ENST00000586856 C5orf52A6NGY3 159 aa13.99□□□□□ -0.17
ERCC2-209ENST00000586856 IFITM1P13164 125 aa13.99□□□□□ -0.17
ERCC2-209ENST00000586856 LINC00483Q53H64 154 aa13.99□□□□□ -0.17
ERCC2-209ENST00000586856 LINC00518Q8N0U6 118 aa13.99□□□□□ -0.17
ERCC2-209ENST00000586856 PRR4Q16378 134 aa13.98□□□□□ -0.17
ERCC2-209ENST00000586856 GAGE2AQ6NT46 116 aa13.98□□□□□ -0.17
ERCC2-209ENST00000586856 Q6ZVH6 145 aa13.98□□□□□ -0.17
ERCC2-209ENST00000586856 HINT1P49773 126 aaPredicted RBP13.95□□□□□ -0.18
ERCC2-209ENST00000586856 SCGB1D1O95968 90 aa13.94□□□□□ -0.18
ERCC2-209ENST00000586856 MUSTN1Q8IVN3 82 aa13.94□□□□□ -0.18
ERCC2-209ENST00000586856 C6orf99Q4VX62 202 aa13.89□□□□□ -0.19
ERCC2-209ENST00000586856 Q8NBF4 154 aa13.89□□□□□ -0.19
ERCC2-209ENST00000586856 ST20-AS1Q8NBB2 130 aa13.88□□□□□ -0.19
ERCC2-209ENST00000586856 A6NDN8 102 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 COX7BP24311 80 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 ELOF1P60002 83 aaKnown RBP13.87□□□□□ -0.19
ERCC2-209ENST00000586856 CTAG1AP78358 180 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 RETNLBQ9BQ08 111 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 LPAP08519 4548 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 RNF213Q63HN8 5207 aa13.87□□□□□ -0.19
ERCC2-209ENST00000586856 IGLV9-49A0A0B4J1Y8 123 aa13.86□□□□□ -0.19
ERCC2-209ENST00000586856 MOBPQ13875 183 aa13.86□□□□□ -0.19
ERCC2-209ENST00000586856 SPAG11AQ6PDA7 123 aa13.86□□□□□ -0.19
ERCC2-209ENST00000586856 DHRS4-AS1Q9P1J3 65 aa13.86□□□□□ -0.19
ERCC2-209ENST00000586856 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
ERCC2-209ENST00000586856 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
ERCC2-209ENST00000586856 TRBV7-6A0A0J9YX20 115 aa13.8□□□□□ -0.2
ERCC2-209ENST00000586856 COX8AP10176 69 aa13.8□□□□□ -0.2
ERCC2-209ENST00000586856 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
ERCC2-209ENST00000586856 C9orf153Q5TBE3 101 aa13.78□□□□□ -0.2
ERCC2-209ENST00000586856 SSBP3-AS1Q7Z2R9 100 aa13.78□□□□□ -0.2
ERCC2-209ENST00000586856 A4D1N5 150 aa13.77□□□□□ -0.21
ERCC2-209ENST00000586856 SPRR1BP22528 89 aa13.77□□□□□ -0.21
ERCC2-209ENST00000586856 SPINK1P00995 79 aa13.75□□□□□ -0.21
ERCC2-209ENST00000586856 SMIM11BQ8TCY0 68 aa13.75□□□□□ -0.21
ERCC2-209ENST00000586856 DLEU1O43261 78 aa13.74□□□□□ -0.21
ERCC2-209ENST00000586856 PAM16Q9Y3D7 125 aa13.74□□□□□ -0.21
ERCC2-209ENST00000586856 SPATA45Q537H7 98 aa13.72□□□□□ -0.21
ERCC2-209ENST00000586856 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
ERCC2-209ENST00000586856 HIST1H4GQ99525 98 aa13.72□□□□□ -0.21
ERCC2-209ENST00000586856 C14orf144Q96I85 54 aa13.71□□□□□ -0.21
ERCC2-209ENST00000586856 VAMP8Q9BV40 100 aa13.71□□□□□ -0.21
ERCC2-209ENST00000586856 IGLV7-46A0A075B6I9 117 aa13.7□□□□□ -0.22
ERCC2-209ENST00000586856 TAL2Q16559 108 aa13.68□□□□□ -0.22
ERCC2-209ENST00000586856 DEFB105AQ8NG35 78 aa13.68□□□□□ -0.22
ERCC2-209ENST00000586856 C12orf57Q99622 126 aa13.68□□□□□ -0.22
ERCC2-209ENST00000586856 LAMTOR3Q9UHA4 124 aa13.68□□□□□ -0.22
ERCC2-209ENST00000586856 RPS29P62273 56 aaKnown RBP13.67□□□□□ -0.22
ERCC2-209ENST00000586856 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
ERCC2-209ENST00000586856 TPRXLQ17RH7 258 aa13.65□□□□□ -0.22
ERCC2-209ENST00000586856 FP248Q71RG6 208 aaPredicted RBP13.65□□□□□ -0.22
ERCC2-209ENST00000586856 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
ERCC2-209ENST00000586856 Q1RN00 199 aa13.64□□□□□ -0.23
ERCC2-209ENST00000586856 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
ERCC2-209ENST00000586856 IGLV5-48A0A075B6I7 105 aa13.63□□□□□ -0.23
ERCC2-209ENST00000586856 LINC01547P58512 204 aaPredicted RBP13.62□□□□□ -0.23
ERCC2-209ENST00000586856 VAMP3Q15836 100 aa13.62□□□□□ -0.23
ERCC2-209ENST00000586856 C2orf91Q6ZV80 131 aa13.62□□□□□ -0.23
ERCC2-209ENST00000586856 Q8N377 158 aa13.62□□□□□ -0.23
ERCC2-209ENST00000586856 TMA7Q9Y2S6 64 aaKnown RBP13.62□□□□□ -0.23
ERCC2-209ENST00000586856 SLC25A20O43772 301 aa13.59□□□□□ -0.23
ERCC2-209ENST00000586856 SMIM29Q86T20 159 aa13.59□□□□□ -0.23
ERCC2-209ENST00000586856 PYY3Q5JQD4 70 aa13.58□□□□□ -0.24
ERCC2-209ENST00000586856 CDIP1Q9H305 208 aa13.58□□□□□ -0.24
ERCC2-209ENST00000586856 LINC00575Q6W349 94 aa13.57□□□□□ -0.24
ERCC2-209ENST00000586856 CFC1BP0CG36 223 aa13.54□□□□□ -0.24
ERCC2-209ENST00000586856 CFC1P0CG37 223 aa13.54□□□□□ -0.24
ERCC2-209ENST00000586856 HRCT1Q6UXD1 115 aa13.54□□□□□ -0.24
ERCC2-209ENST00000586856 PRO1933Q9H354 126 aa13.53□□□□□ -0.24
ERCC2-209ENST00000586856 H7C2G1 150 aa13.52□□□□□ -0.25
ERCC2-209ENST00000586856 RAB37Q96AX2 223 aa13.52□□□□□ -0.25
ERCC2-209ENST00000586856 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
ERCC2-209ENST00000586856 hADV29S1A0JD25 119 aa13.51□□□□□ -0.25
ERCC2-209ENST00000586856 BVES-AS1Q5T3Y7 98 aa13.51□□□□□ -0.25
ERCC2-209ENST00000586856 KRTAP13-3Q3SY46 172 aa13.5□□□□□ -0.25
ERCC2-209ENST00000586856 Q6ZQY7 126 aa13.5□□□□□ -0.25
ERCC2-209ENST00000586856 CEND1Q8N111 149 aa13.49□□□□□ -0.25
ERCC2-209ENST00000586856 LIMD2Q9BT23 127 aa13.49□□□□□ -0.25
ERCC2-209ENST00000586856 CD164Q04900 197 aa13.47□□□□□ -0.25
ERCC2-209ENST00000586856 A0A0G2JQZ4 141 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms