RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
HMG20B-215ENST00000585741 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
HMG20B-215ENST00000585741 TRAV23DV6A0A075B6W5 121 aa10.57□□□□□ -0.72
HMG20B-215ENST00000585741 H7C2G1 150 aa10.57□□□□□ -0.72
HMG20B-215ENST00000585741 IGLV6-57P01721 117 aa10.57□□□□□ -0.72
HMG20B-215ENST00000585741 PRYO14603 147 aa10.56□□□□□ -0.72
HMG20B-215ENST00000585741 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
HMG20B-215ENST00000585741 Q5VSD8 79 aa10.55□□□□□ -0.72
HMG20B-215ENST00000585741 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
HMG20B-215ENST00000585741 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
HMG20B-215ENST00000585741 K7ERJ3 54 aa10.54□□□□□ -0.72
HMG20B-215ENST00000585741 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
HMG20B-215ENST00000585741 KCNQ1DNQ9H478 68 aa10.53□□□□□ -0.72
HMG20B-215ENST00000585741 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
HMG20B-215ENST00000585741 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
HMG20B-215ENST00000585741 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
HMG20B-215ENST00000585741 C1orf137Q5JT78 98 aa10.52□□□□□ -0.73
HMG20B-215ENST00000585741 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
HMG20B-215ENST00000585741 DIRC1Q969H9 104 aa10.52□□□□□ -0.73
HMG20B-215ENST00000585741 VAMP3Q15836 100 aa10.51□□□□□ -0.73
HMG20B-215ENST00000585741 PSORS1C2Q9UIG4 136 aa10.51□□□□□ -0.73
HMG20B-215ENST00000585741 PSMB2P49721 201 aa10.5□□□□□ -0.73
HMG20B-215ENST00000585741 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
HMG20B-215ENST00000585741 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
HMG20B-215ENST00000585741 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
HMG20B-215ENST00000585741 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
HMG20B-215ENST00000585741 UBE2AP49459 152 aa10.49□□□□□ -0.73
HMG20B-215ENST00000585741 BCE1O60756 84 aa10.48□□□□□ -0.73
HMG20B-215ENST00000585741 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
HMG20B-215ENST00000585741 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
HMG20B-215ENST00000585741 SNHG12Q9BXW3 62 aa10.48□□□□□ -0.73
HMG20B-215ENST00000585741 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.73
HMG20B-215ENST00000585741 COX6CP09669 75 aa10.46□□□□□ -0.73
HMG20B-215ENST00000585741 COX7BP24311 80 aa10.46□□□□□ -0.73
HMG20B-215ENST00000585741 RPL28P46779 137 aaKnown RBP10.46□□□□□ -0.73
HMG20B-215ENST00000585741 TSPAN13O95857 204 aa10.45□□□□□ -0.74
HMG20B-215ENST00000585741 COL5A1-AS1Q5SY13 56 aa10.45□□□□□ -0.74
HMG20B-215ENST00000585741 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
HMG20B-215ENST00000585741 SPRR1AP35321 89 aa10.44□□□□□ -0.74
HMG20B-215ENST00000585741 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
HMG20B-215ENST00000585741 SNCGO76070 127 aa10.43□□□□□ -0.74
HMG20B-215ENST00000585741 PRLHP81277 87 aa10.42□□□□□ -0.74
HMG20B-215ENST00000585741 H0YGX0 51 aa10.41□□□□□ -0.74
HMG20B-215ENST00000585741 SLC25A20O43772 301 aa10.41□□□□□ -0.74
HMG20B-215ENST00000585741 IGLV7-43P04211 117 aa10.41□□□□□ -0.74
HMG20B-215ENST00000585741 B5MCH6 92 aa10.4□□□□□ -0.74
HMG20B-215ENST00000585741 TRIAP1O43715 76 aa10.4□□□□□ -0.74
HMG20B-215ENST00000585741 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
HMG20B-215ENST00000585741 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.74
HMG20B-215ENST00000585741 Q6ZRX8 168 aa10.4□□□□□ -0.74
HMG20B-215ENST00000585741 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
HMG20B-215ENST00000585741 DHRS4-AS1Q9P1J3 65 aa10.39□□□□□ -0.75
HMG20B-215ENST00000585741 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
HMG20B-215ENST00000585741 KRTAP4-16G5E9R7 235 aaPredicted RBP10.38□□□□□ -0.75
HMG20B-215ENST00000585741 H0Y9J4 135 aa10.38□□□□□ -0.75
HMG20B-215ENST00000585741 H3BUT2 72 aa10.38□□□□□ -0.75
HMG20B-215ENST00000585741 ZNF861PO60384 105 aa10.38□□□□□ -0.75
HMG20B-215ENST00000585741 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
HMG20B-215ENST00000585741 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
HMG20B-215ENST00000585741 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
HMG20B-215ENST00000585741 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
HMG20B-215ENST00000585741 FAT3Q8TDW7 4589 aa10.34□□□□□ -0.75
HMG20B-215ENST00000585741 hADV29S1A0JD25 119 aa10.33□□□□□ -0.76
HMG20B-215ENST00000585741 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
HMG20B-215ENST00000585741 SMCR5Q8TEV8 140 aa10.33□□□□□ -0.76
HMG20B-215ENST00000585741 FABP2P12104 132 aa10.32□□□□□ -0.76
HMG20B-215ENST00000585741 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
HMG20B-215ENST00000585741 DNAL4O96015 105 aa10.31□□□□□ -0.76
HMG20B-215ENST00000585741 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
HMG20B-215ENST00000585741 KRTAP13-1Q8IUC0 172 aa10.31□□□□□ -0.76
HMG20B-215ENST00000585741 Q9BRP9 147 aa10.31□□□□□ -0.76
HMG20B-215ENST00000585741 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-215ENST00000585741 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
HMG20B-215ENST00000585741 KRTAP29-1A8MX34 341 aaPredicted RBP10.3□□□□□ -0.76
HMG20B-215ENST00000585741 A0A1B0GX51 115 aa10.29□□□□□ -0.76
HMG20B-215ENST00000585741 J3QL48 77 aa10.29□□□□□ -0.76
HMG20B-215ENST00000585741 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
HMG20B-215ENST00000585741 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
HMG20B-215ENST00000585741 TRBV20-1A0A075B6N2 111 aa10.27□□□□□ -0.77
HMG20B-215ENST00000585741 FAM218AQ96MZ4 157 aa10.27□□□□□ -0.77
HMG20B-215ENST00000585741 ERC2-IT1O76042 136 aa10.26□□□□□ -0.77
HMG20B-215ENST00000585741 GHRHP01286 108 aa10.26□□□□□ -0.77
HMG20B-215ENST00000585741 KRTAP10-4P60372 401 aaPredicted RBP10.26□□□□□ -0.77
HMG20B-215ENST00000585741 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
HMG20B-215ENST00000585741 LST1O00453 97 aa10.25□□□□□ -0.77
HMG20B-215ENST00000585741 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
HMG20B-215ENST00000585741 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
HMG20B-215ENST00000585741 TCL1BO95988 128 aa10.24□□□□□ -0.77
HMG20B-215ENST00000585741 Q6ZQY7 126 aa10.24□□□□□ -0.77
HMG20B-215ENST00000585741 SPCS1Q9Y6A9 102 aa10.24□□□□□ -0.77
HMG20B-215ENST00000585741 TRACP01848 142 aa10.23□□□□□ -0.77
HMG20B-215ENST00000585741 OCIAD2Q56VL3 154 aa10.23□□□□□ -0.77
HMG20B-215ENST00000585741 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
HMG20B-215ENST00000585741 ST20-AS1Q8NBB2 130 aa10.22□□□□□ -0.77
HMG20B-215ENST00000585741 SPRR4Q96PI1 79 aa10.21□□□□□ -0.77
HMG20B-215ENST00000585741 ORMDL1Q9P0S3 153 aa10.21□□□□□ -0.77
HMG20B-215ENST00000585741 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
HMG20B-215ENST00000585741 H3BQ85 93 aa10.19□□□□□ -0.78
HMG20B-215ENST00000585741 GTF2H5Q6ZYL4 71 aa10.19□□□□□ -0.78
HMG20B-215ENST00000585741 PPDPFLQ8WWR9 84 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms