RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TRBV10-2A0A0K0K1G8 114 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 HIGD1CA8MV81 97 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 H3BPC8 53 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 H3BVH4 76 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 M0R2N4 97 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 M0R2Z0 102 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 M0R3E3 92 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 NDUFA1O15239 70 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 HBDP02042 147 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 PRB3Q04118 309 aaPredicted RBP1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 PMCHL1Q16048 86 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 LYZL1Q6UWQ5 148 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 TMEM136Q6ZRR5 245 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 LINC00313P59037 77 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP12-2P59991 146 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 OCIAD2Q56VL3 154 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 Q8TAT8 98 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 CARD19Q96LW7 228 aa1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 RNASE7Q9H1E1 156 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-211ENST00000584897 FAT1Q14517 4588 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 DNAH5Q8TE73 4624 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 A0A1B0GX51 115 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 SDHAF1A6NFY7 115 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 J3QQQ9 107 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 MGPP08493 103 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 DEFB130BP0DP73 79 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 DEFB130AP0DP74 79 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 SDIM1Q6ZPB5 146 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 Q6ZTI0 123 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 SPANXA2-OT1Q8N9U9 137 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 NUP35Q8NFH5 326 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LOC107984156A0A0G2JMH3 177 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 MYMXA0A1B0GTQ4 84 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 C11orf86A6NJI1 115 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LST1O00453 97 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LEPROTO15243 131 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 SPAG11AQ6PDA7 123 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 ARL17AQ8IVW1 177 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 HIST1H2BLQ99880 126 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LINC00588Q9Y4M8 146 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 IGKV2D-26A0A0A0MRZ7 120 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LECT2O14960 151 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 LY6G6CO95867 125 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 IGLC3P0DOY3 106 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 FAM229BQ4G0N7 80 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 AMELXQ99217 191 aa1.18□□□□□ -2.22
SMCHD1-211ENST00000584897 J3QR89 54 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 TCL1BO95988 128 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 PRB2P02812 416 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 LINC00315P59091 139 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 GDF5OSQ5U4N7 250 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 FAM19A2Q8N3H0 131 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 Q8N814 137 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 C9orf163Q8N9P6 203 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 TTTY13Q9BZ97 58 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 CDC42SE2Q9NRR3 84 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 A0A087WTM6 91 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 TMEM262E9PQX1 116 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 DLEU1O43261 78 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 TRGC2P03986 189 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 FABP2P12104 132 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 CRIP1P50238 77 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 ESRGQ1W209 222 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 C2orf91Q6ZV80 131 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 TRAV12-2A0A075B6T6 113 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 COLCA2A8K830 154 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 C16orf90A8MZG2 172 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 H7C2G1 150 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 GNRH2O43555 120 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 LEPROTL1O95214 131 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 ZNF22P17026 224 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 LGALS3P17931 250 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTDAPP60985 99 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 Q5W150 140 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 DEFB104AQ8WTQ1 72 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 UBE2D4Q9Y2X8 147 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 SSPOA2VEC9 5147 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 A0A1B0GVG6 124 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 A8MUN3 132 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 F8VRH5 84 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 ANGP03950 147 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 ZNF80P51504 273 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 CKS1BP61024 79 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 UBE2BP63146 152 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 PLAC8Q9NZF1 115 aa1.17□□□□□ -2.22
SMCHD1-211ENST00000584897 LINC00959A0A1B0GUT2 108 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 DPM2O94777 84 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 HTN3P15516 51 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 RPL28P46779 137 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 XCL1P47992 114 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 DEFA5Q01523 94 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 PRR9Q5T870 116 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 Q6ZSA8 131 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms