RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DDTP30046 118 aa6.38□□□□□ -1.39
CCDC47-206ENST00000584112 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
CCDC47-206ENST00000584112 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
CCDC47-206ENST00000584112 COLCA2A8K830 154 aa6.37□□□□□ -1.39
CCDC47-206ENST00000584112 NDUFC2O95298 119 aa6.37□□□□□ -1.39
CCDC47-206ENST00000584112 PMCHL2Q9BQD1 86 aa6.37□□□□□ -1.39
CCDC47-206ENST00000584112 B5MCH6 92 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
CCDC47-206ENST00000584112 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 SLC7A5P1Q8MH63 180 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 Q8NBF4 154 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 PPDPFQ9H3Y8 114 aa6.36□□□□□ -1.39
CCDC47-206ENST00000584112 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
CCDC47-206ENST00000584112 E9PLD3 99 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 SPINK1P00995 79 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 MT1HP80294 61 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
CCDC47-206ENST00000584112 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 Q6ZRX8 168 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 CBY1Q9Y3M2 126 aa6.34□□□□□ -1.39
CCDC47-206ENST00000584112 A0A0J9YXY3 114 aa6.33□□□□□ -1.4
CCDC47-206ENST00000584112 CFC1BP0CG36 223 aa6.33□□□□□ -1.4
CCDC47-206ENST00000584112 TRAV23DV6A0A075B6W5 121 aa6.32□□□□□ -1.4
CCDC47-206ENST00000584112 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
CCDC47-206ENST00000584112 Q9BRP9 147 aa6.32□□□□□ -1.4
CCDC47-206ENST00000584112 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 NPC2P61916 151 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 MOBPQ13875 183 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 SOSTDC1Q6X4U4 206 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 NEBP20929 6669 aa6.31□□□□□ -1.4
CCDC47-206ENST00000584112 ZNF73O43830 326 aaPredicted RBP6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BKO60814 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HINT1P49773 126 aaPredicted RBP6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
CCDC47-206ENST00000584112 C5orf52A6NGY3 159 aa6.29□□□□□ -1.4
CCDC47-206ENST00000584112 TIMM17BO60830 172 aa6.29□□□□□ -1.4
CCDC47-206ENST00000584112 LINC01545Q5VT33 79 aa6.29□□□□□ -1.4
CCDC47-206ENST00000584112 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
CCDC47-206ENST00000584112 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
CCDC47-206ENST00000584112 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 LITAFQ99732 161 aa6.27□□□□□ -1.41
CCDC47-206ENST00000584112 SLC25A20O43772 301 aa6.26□□□□□ -1.41
CCDC47-206ENST00000584112 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
CCDC47-206ENST00000584112 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
CCDC47-206ENST00000584112 LINC00518Q8N0U6 118 aa6.25□□□□□ -1.41
CCDC47-206ENST00000584112 Q8N377 158 aa6.25□□□□□ -1.41
CCDC47-206ENST00000584112 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
CCDC47-206ENST00000584112 C3orf79P0CE67 100 aa6.24□□□□□ -1.41
CCDC47-206ENST00000584112 SLC25A34Q6PIV7 304 aa6.24□□□□□ -1.41
CCDC47-206ENST00000584112 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
CCDC47-206ENST00000584112 KRTDAPP60985 99 aa6.23□□□□□ -1.41
CCDC47-206ENST00000584112 ST20-AS1Q8NBB2 130 aa6.23□□□□□ -1.41
CCDC47-206ENST00000584112 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
CCDC47-206ENST00000584112 C20orf202A1L168 122 aa6.22□□□□□ -1.41
CCDC47-206ENST00000584112 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
CCDC47-206ENST00000584112 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
CCDC47-206ENST00000584112 SCGB1D4Q6XE38 83 aa6.22□□□□□ -1.41
CCDC47-206ENST00000584112 SPRR1BP22528 89 aa6.21□□□□□ -1.42
CCDC47-206ENST00000584112 COX7BP24311 80 aa6.21□□□□□ -1.42
CCDC47-206ENST00000584112 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
CCDC47-206ENST00000584112 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
CCDC47-206ENST00000584112 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
CCDC47-206ENST00000584112 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
CCDC47-206ENST00000584112 AKR1D1P51857 326 aa6.2□□□□□ -1.42
CCDC47-206ENST00000584112 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
CCDC47-206ENST00000584112 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
CCDC47-206ENST00000584112 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
CCDC47-206ENST00000584112 IFITM1P13164 125 aa6.19□□□□□ -1.42
CCDC47-206ENST00000584112 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
CCDC47-206ENST00000584112 TRBV7-6A0A0J9YX20 115 aa6.18□□□□□ -1.42
CCDC47-206ENST00000584112 Q6ZVH6 145 aa6.18□□□□□ -1.42
CCDC47-206ENST00000584112 TAL2Q16559 108 aa6.17□□□□□ -1.42
CCDC47-206ENST00000584112 A0A1B0GWB2 263 aa6.16□□□□□ -1.42
CCDC47-206ENST00000584112 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
CCDC47-206ENST00000584112 A6NDN8 102 aa6.15□□□□□ -1.42
CCDC47-206ENST00000584112 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
CCDC47-206ENST00000584112 SNRPEP62304 92 aaKnown RBP6.14□□□□□ -1.43
CCDC47-206ENST00000584112 CD164Q04900 197 aa6.14□□□□□ -1.43
CCDC47-206ENST00000584112 Q1RN00 199 aa6.14□□□□□ -1.43
CCDC47-206ENST00000584112 XP32Q5T750 250 aa6.14□□□□□ -1.43
CCDC47-206ENST00000584112 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms