RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 KMT2CQ8NEZ4 4911 aaKnown RBP-0.25□□□□□ -2.45
PPP4R1-227ENST00000583988 H0YGG7 62 aa-0.25□□□□□ -2.45
PPP4R1-227ENST00000583988 MAP1AP78559 2803 aaPredicted RBP-0.25□□□□□ -2.45
PPP4R1-227ENST00000583988 ABCC3O15438 1527 aa-0.26□□□□□ -2.45
PPP4R1-227ENST00000583988 PLIN4Q96Q06 1357 aa-0.26□□□□□ -2.45
PPP4R1-227ENST00000583988 PVALEFA0A1B0GWK0 134 aa-0.26□□□□□ -2.45
PPP4R1-227ENST00000583988 SNRPFP62306 86 aaKnown RBP-0.26□□□□□ -2.45
PPP4R1-227ENST00000583988 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
PPP4R1-227ENST00000583988 UBR1Q8IWV7 1749 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 TTC37Q6PGP7 1564 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 NEXMIFQ5QGS0 1516 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 MYMXA0A1B0GTQ4 84 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 S100A16Q96FQ6 103 aaKnown RBP-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 SUPT6HQ7KZ85 1726 aaKnown RBP-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 TIAM2Q8IVF5 1701 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 PDE4DIPQ5VU43 2346 aa-0.27□□□□□ -2.45
PPP4R1-227ENST00000583988 K7EP34 96 aa-0.28□□□□□ -2.45
PPP4R1-227ENST00000583988 NDUFB1O75438 58 aa-0.28□□□□□ -2.45
PPP4R1-227ENST00000583988 RABAC1Q9UI14 185 aa-0.28□□□□□ -2.45
PPP4R1-227ENST00000583988 RGPD1P0DJD0 1748 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 NBASA2RRP1 2371 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 SPRR2AP35326 72 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 LELP1Q5T871 98 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 LINC00643Q86TS7 51 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 WFDC9Q8NEX5 89 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 LTN1O94822 1766 aa-0.29□□□□□ -2.46
PPP4R1-227ENST00000583988 RYR3Q15413 4870 aa-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 PTPN23Q9H3S7 1636 aa-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 CEBPZOSA8MTT3 80 aa-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 ACYP1P07311 99 aa-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 SETD2Q9BYW2 2564 aaPredicted RBP-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.3□□□□□ -2.46
PPP4R1-227ENST00000583988 REV3LO60673 3130 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 ADAMTS12P58397 1594 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 TRAV21A0A0B4J279 112 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 LRP1BQ9NZR2 4599 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 TRANK1O15050 2925 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 MAP3K4Q9Y6R4 1608 aa-0.31□□□□□ -2.46
PPP4R1-227ENST00000583988 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
PPP4R1-227ENST00000583988 PPLO60437 1756 aa-0.32□□□□□ -2.46
PPP4R1-227ENST00000583988 KIF14Q15058 1648 aa-0.32□□□□□ -2.46
PPP4R1-227ENST00000583988 POLR1AO95602 1720 aaPredicted RBP-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 C4AP0C0L4 1744 aa-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 C4BP0C0L5 1744 aa-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 PKHD1P08F94 4074 aa-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 KANTRA0A1W2PQU2 76 aa-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 NDUFA3O95167 84 aa-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 URB2Q14146 1524 aaKnown RBP-0.33□□□□□ -2.46
PPP4R1-227ENST00000583988 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 USH2AO75445 5202 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 C3orf79P0CE67 100 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 UACAQ9BZF9 1416 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 RNF213Q63HN8 5207 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 SPG11Q96JI7 2443 aa-0.34□□□□□ -2.46
PPP4R1-227ENST00000583988 TMEM131LA2VDJ0 1609 aa-0.35□□□□□ -2.46
PPP4R1-227ENST00000583988 NWD1Q149M9 1564 aa-0.35□□□□□ -2.47
PPP4R1-227ENST00000583988 TGP01266 2768 aa-0.35□□□□□ -2.47
PPP4R1-227ENST00000583988 PRO3102Q9H379 93 aa-0.35□□□□□ -2.47
PPP4R1-227ENST00000583988 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.47
PPP4R1-227ENST00000583988 HECTD1Q9ULT8 2610 aa-0.35□□□□□ -2.47
PPP4R1-227ENST00000583988 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
PPP4R1-227ENST00000583988 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
PPP4R1-227ENST00000583988 NESP48681 1621 aa-0.36□□□□□ -2.47
PPP4R1-227ENST00000583988 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.36□□□□□ -2.47
PPP4R1-227ENST00000583988 UBR4Q5T4S7 5183 aa-0.36□□□□□ -2.47
PPP4R1-227ENST00000583988 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 SPRR2EP22531 72 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 IFI27P40305 119 aaPredicted RBP-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 NF1P21359 2839 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 NCOA2Q15596 1464 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 RYR2Q92736 4967 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 MXRA5Q9NR99 2828 aa-0.37□□□□□ -2.47
PPP4R1-227ENST00000583988 MAGI3Q5TCQ9 1506 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 USP32Q8NFA0 1604 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 RYR1P21817 5038 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 GNG2P59768 71 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 CCDC88BA6NC98 1476 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 EPG5Q9HCE0 2579 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 DOT1LQ8TEK3 1739 aa-0.38□□□□□ -2.47
PPP4R1-227ENST00000583988 UMAD1C9J7I0 102 aa-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 LINC00158P58513 81 aa-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 ATP5EP2Q5VTU8 51 aa-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 PIK3C2BO00750 1634 aa-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 SONP18583 2426 aaKnown RBP-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 PRRC2CQ9Y520 2896 aaKnown RBP-0.39□□□□□ -2.47
PPP4R1-227ENST00000583988 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
PPP4R1-227ENST00000583988 KIAA1109Q2LD37 5005 aa-0.4□□□□□ -2.47
PPP4R1-227ENST00000583988 PLXNC1O60486 1568 aa-0.4□□□□□ -2.47
PPP4R1-227ENST00000583988 HMGA1P17096 107 aaKnown RBP-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 ADIRFQ15847 76 aa-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 S100A13Q99584 98 aa-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 HYDINQ4G0P3 5121 aa-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 TNRC18O15417 2968 aaPredicted RBP-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 RB1CC1Q8TDY2 1594 aa-0.41□□□□□ -2.48
PPP4R1-227ENST00000583988 DEPDC5O75140 1603 aa-0.42□□□□□ -2.48
PPP4R1-227ENST00000583988 EPPK1P58107 5090 aaKnown RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms