RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594	HIVEP1	P15822	2718 aa		6.29	□□□□□ -1.4
PPP4R1-222	ENST00000582594		Q6ZRP5	223 aa		6.29	□□□□□ -1.4
PPP4R1-222	ENST00000582594	OCR1	Q9BZK8	76 aa		6.29	□□□□□ -1.4
PPP4R1-222	ENST00000582594	PDZD2	O15018	2839 aa		6.29	□□□□□ -1.4
PPP4R1-222	ENST00000582594		A0A0U1RQV1	116 aa		6.28	□□□□□ -1.4
PPP4R1-222	ENST00000582594	FUS	P35637	526 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
PPP4R1-222	ENST00000582594	EGFEM1P	Q0D2K5	195 aa		6.28	□□□□□ -1.4
PPP4R1-222	ENST00000582594	C15orf56	Q8N910	161 aa		6.28	□□□□□ -1.4
PPP4R1-222	ENST00000582594	ATP5E	P56381	51 aa	Predicted RBP	6.28	□□□□□ -1.4
PPP4R1-222	ENST00000582594	SMIM29	Q86T20	159 aa		6.27	□□□□□ -1.41
PPP4R1-222	ENST00000582594		Q8N377	158 aa		6.27	□□□□□ -1.41
PPP4R1-222	ENST00000582594	TENM1	Q9UKZ4	2725 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	LRCOL1	A6NCL2	159 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	SERTAD4-AS1	Q5TG53	156 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	KRTAP26-1	Q6PEX3	210 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	PKD1L1	Q8TDX9	2849 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	ERC2-IT1	O76042	136 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	TENM4	Q6N022	2769 aa		6.26	□□□□□ -1.41
PPP4R1-222	ENST00000582594	RPL37AP8	A6NKH3	93 aa		6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594	NKAPP1	Q8N9T2	125 aa		6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594	RETN	Q9HD89	108 aa		6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594	TRRAP	Q9Y4A5	3859 aa		6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594	IGKV2D-24	A0A075B6R9	120 aa		6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594	KPRP	Q5T749	579 aa	Predicted RBP	6.25	□□□□□ -1.41
PPP4R1-222	ENST00000582594		Q6ZTC4	211 aa		6.24	□□□□□ -1.41
PPP4R1-222	ENST00000582594	C7orf33	Q8WU49	177 aa		6.24	□□□□□ -1.41
PPP4R1-222	ENST00000582594	ESRG	Q1W209	222 aa		6.24	□□□□□ -1.41
PPP4R1-222	ENST00000582594	NOTCH2	Q04721	2471 aa		6.23	□□□□□ -1.41
PPP4R1-222	ENST00000582594		A0A1W2PNM2	257 aa		6.23	□□□□□ -1.41
PPP4R1-222	ENST00000582594	ST20-AS1	Q8NBB2	130 aa		6.23	□□□□□ -1.41
PPP4R1-222	ENST00000582594	SYCN	Q0VAF6	134 aa		6.22	□□□□□ -1.41
PPP4R1-222	ENST00000582594	FASN	P49327	2511 aa	Known RBP	6.22	□□□□□ -1.41
PPP4R1-222	ENST00000582594	FAM168B	A1KXE4	195 aa		6.22	□□□□□ -1.41
PPP4R1-222	ENST00000582594	ATR	Q13535	2644 aa		6.22	□□□□□ -1.41
PPP4R1-222	ENST00000582594	KCNQ1DN	Q9H478	68 aa		6.21	□□□□□ -1.41
PPP4R1-222	ENST00000582594	C1orf137	Q5JT78	98 aa		6.21	□□□□□ -1.42
PPP4R1-222	ENST00000582594	PRB2	P02812	416 aa	Predicted RBP	6.21	□□□□□ -1.42
PPP4R1-222	ENST00000582594	PRR4	Q16378	134 aa		6.21	□□□□□ -1.42
PPP4R1-222	ENST00000582594		Q9BRP9	147 aa		6.21	□□□□□ -1.42
PPP4R1-222	ENST00000582594	F8	P00451	2351 aa		6.2	□□□□□ -1.42
PPP4R1-222	ENST00000582594	IGLV5-48	A0A075B6I7	105 aa		6.2	□□□□□ -1.42
PPP4R1-222	ENST00000582594		A0A0G2JQZ4	141 aa		6.2	□□□□□ -1.42
PPP4R1-222	ENST00000582594		A0A1W2PNN7	141 aa		6.2	□□□□□ -1.42
PPP4R1-222	ENST00000582594	TEP1	Q99973	2627 aa	Known RBP	6.19	□□□□□ -1.42
PPP4R1-222	ENST00000582594		K7EQZ3	153 aa		6.19	□□□□□ -1.42
PPP4R1-222	ENST00000582594	ETDC	A0A1B0GVM5	59 aa		6.18	□□□□□ -1.42
PPP4R1-222	ENST00000582594	DEFB116	Q30KQ4	102 aa		6.18	□□□□□ -1.42
PPP4R1-222	ENST00000582594	DSCR10	P59022	87 aa		6.18	□□□□□ -1.42
PPP4R1-222	ENST00000582594		Q6ZRX8	168 aa		6.18	□□□□□ -1.42
PPP4R1-222	ENST00000582594	hDV103S1	A0JD37	113 aa		6.17	□□□□□ -1.42
PPP4R1-222	ENST00000582594		Q8NBF4	154 aa		6.17	□□□□□ -1.42
PPP4R1-222	ENST00000582594	DHRS4-AS1	Q9P1J3	65 aa		6.17	□□□□□ -1.42
PPP4R1-222	ENST00000582594	C1orf64	Q8NEQ6	169 aa		6.16	□□□□□ -1.42
PPP4R1-222	ENST00000582594	INAFM1	C9JVW0	142 aa		6.16	□□□□□ -1.42
PPP4R1-222	ENST00000582594	C1orf195	Q5TG92	126 aa		6.16	□□□□□ -1.42
PPP4R1-222	ENST00000582594	HELZ2	Q9BYK8	2649 aa	Known RBP	6.16	□□□□□ -1.42
PPP4R1-222	ENST00000582594	UBE2B	P63146	152 aa		6.15	□□□□□ -1.42
PPP4R1-222	ENST00000582594	CASC10	Q5T4H9	136 aa		6.15	□□□□□ -1.42
PPP4R1-222	ENST00000582594	TENM3	Q9P273	2699 aa		6.15	□□□□□ -1.42
PPP4R1-222	ENST00000582594	TNP2	Q05952	138 aa		6.15	□□□□□ -1.42
PPP4R1-222	ENST00000582594	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.15	□□□□□ -1.43
PPP4R1-222	ENST00000582594	IGLV1-50	A0A075B6I6	118 aa		6.14	□□□□□ -1.43
PPP4R1-222	ENST00000582594	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.14	□□□□□ -1.43
PPP4R1-222	ENST00000582594	PSPHP1	O15172	72 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	OXLD1	Q5BKU9	147 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	WFDC13	Q8IUB5	93 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	KRTAP7-1	Q8IUC3	87 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	LCE6A	A0A183	80 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	LINC01556	Q5JQF7	62 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	BAHCC1	Q9P281	2608 aa		6.13	□□□□□ -1.43
PPP4R1-222	ENST00000582594	ZCCHC13	Q8WW36	166 aa	Known RBP	6.12	□□□□□ -1.43
PPP4R1-222	ENST00000582594	OTOG	Q6ZRI0	2925 aa		6.12	□□□□□ -1.43
PPP4R1-222	ENST00000582594	SPRR4	Q96PI1	79 aa		6.12	□□□□□ -1.43
PPP4R1-222	ENST00000582594	DEFB131B	A0A096LNP1	70 aa		6.12	□□□□□ -1.43
PPP4R1-222	ENST00000582594		H3BNG1	76 aa		6.12	□□□□□ -1.43
PPP4R1-222	ENST00000582594	HCG22	E2RYF7	251 aa		6.11	□□□□□ -1.43
PPP4R1-222	ENST00000582594	PSCA	O43653	123 aa		6.11	□□□□□ -1.43
PPP4R1-222	ENST00000582594	LINC00476	Q8WZB0	136 aa		6.11	□□□□□ -1.43
PPP4R1-222	ENST00000582594	SPRR1A	P35321	89 aa		6.1	□□□□□ -1.43
PPP4R1-222	ENST00000582594	RPL37A	P61513	92 aa	Known RBP	6.1	□□□□□ -1.43
PPP4R1-222	ENST00000582594		F8WDY8	70 aa		6.1	□□□□□ -1.43
PPP4R1-222	ENST00000582594	MRPL55	Q7Z7F7	128 aa	Known RBP	6.1	□□□□□ -1.43
PPP4R1-222	ENST00000582594	HECTD1	Q9ULT8	2610 aa		6.1	□□□□□ -1.43
PPP4R1-222	ENST00000582594	NSD1	Q96L73	2696 aa	Predicted RBP	6.09	□□□□□ -1.43
PPP4R1-222	ENST00000582594		A0A1B0GW54	56 aa		6.09	□□□□□ -1.43
PPP4R1-222	ENST00000582594	KRTAP10-11	P60412	298 aa		6.09	□□□□□ -1.43
PPP4R1-222	ENST00000582594	TLX1NB	P0CAT3	122 aa		6.08	□□□□□ -1.44
PPP4R1-222	ENST00000582594	PLA2G2D	Q9UNK4	145 aa		6.08	□□□□□ -1.44
PPP4R1-222	ENST00000582594	ANK2	Q01484	3957 aa		6.08	□□□□□ -1.44
PPP4R1-222	ENST00000582594	IGFL1	Q6UW32	110 aa		6.08	□□□□□ -1.44
PPP4R1-222	ENST00000582594		V9GYY9	64 aa		6.08	□□□□□ -1.44
PPP4R1-222	ENST00000582594		A0A087WSZ3	146 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594	TRAV22	A0A0B4J277	110 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594	PRLH	P81277	87 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594		Q1T7F1	81 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594	C11orf45	Q8TAV5	145 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594	REG3G	Q6UW15	175 aa		6.07	□□□□□ -1.44
PPP4R1-222	ENST00000582594	IGLV5-37	A0A075B6J1	123 aa		6.06	□□□□□ -1.44
PPP4R1-222	ENST00000582594	LINC00208	Q96KT6	92 aa		6.06	□□□□□ -1.44
PPP4R1-222	ENST00000582594	FLNB	O75369	2602 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms