RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 UBE2AP49459 152 aa13.73□□□□□ -0.21
NDEL1-207ENST00000580012 FAM19A1Q7Z5A9 133 aa13.73□□□□□ -0.21
NDEL1-207ENST00000580012 S100A12P80511 92 aa13.72□□□□□ -0.21
NDEL1-207ENST00000580012 LOC105371267A0A1B0GV96 52 aa13.71□□□□□ -0.21
NDEL1-207ENST00000580012 PRLHP81277 87 aa13.7□□□□□ -0.22
NDEL1-207ENST00000580012 HIST1H4GQ99525 98 aa13.7□□□□□ -0.22
NDEL1-207ENST00000580012 TRAV23DV6A0A075B6W5 121 aa13.69□□□□□ -0.22
NDEL1-207ENST00000580012 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
NDEL1-207ENST00000580012 LINC01600Q96MT4 127 aa13.69□□□□□ -0.22
NDEL1-207ENST00000580012 CBY1Q9Y3M2 126 aa13.69□□□□□ -0.22
NDEL1-207ENST00000580012 A4D1N5 150 aa13.68□□□□□ -0.22
NDEL1-207ENST00000580012 J3QL48 77 aa13.68□□□□□ -0.22
NDEL1-207ENST00000580012 B5MCH6 92 aa13.67□□□□□ -0.22
NDEL1-207ENST00000580012 KRTAP1-4P0C5Y4 121 aa13.67□□□□□ -0.22
NDEL1-207ENST00000580012 ETDCA0A1B0GVM5 59 aa13.66□□□□□ -0.22
NDEL1-207ENST00000580012 ZNF73O43830 326 aaPredicted RBP13.66□□□□□ -0.22
NDEL1-207ENST00000580012 SMIM6P0DI80 62 aa13.65□□□□□ -0.22
NDEL1-207ENST00000580012 TAL2Q16559 108 aa13.65□□□□□ -0.22
NDEL1-207ENST00000580012 TRAV13-2A0A0B4J235 113 aa13.64□□□□□ -0.23
NDEL1-207ENST00000580012 MT1HL1P0DM35 61 aa13.64□□□□□ -0.23
NDEL1-207ENST00000580012 UQCR10Q9UDW1 63 aa13.63□□□□□ -0.23
NDEL1-207ENST00000580012 A6NDN8 102 aa13.62□□□□□ -0.23
NDEL1-207ENST00000580012 KRTAP10-8P60410 259 aa13.61□□□□□ -0.23
NDEL1-207ENST00000580012 Q6ZRX8 168 aa13.61□□□□□ -0.23
NDEL1-207ENST00000580012 SMCR5Q8TEV8 140 aa13.6□□□□□ -0.23
NDEL1-207ENST00000580012 CEND1Q8N111 149 aa13.59□□□□□ -0.23
NDEL1-207ENST00000580012 HIGD2AQ9BW72 106 aa13.59□□□□□ -0.23
NDEL1-207ENST00000580012 Q9BRP9 147 aa13.58□□□□□ -0.24
NDEL1-207ENST00000580012 TNXBP22105 4242 aa13.57□□□□□ -0.24
NDEL1-207ENST00000580012 TRBV7-6A0A0J9YX20 115 aa13.56□□□□□ -0.24
NDEL1-207ENST00000580012 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
NDEL1-207ENST00000580012 CFC1P0CG37 223 aa13.56□□□□□ -0.24
NDEL1-207ENST00000580012 HINT1P49773 126 aaPredicted RBP13.56□□□□□ -0.24
NDEL1-207ENST00000580012 C6orf99Q4VX62 202 aa13.56□□□□□ -0.24
NDEL1-207ENST00000580012 SMIM11BQ8TCY0 68 aa13.55□□□□□ -0.24
NDEL1-207ENST00000580012 ERC2-IT1O76042 136 aa13.53□□□□□ -0.24
NDEL1-207ENST00000580012 ELOF1P60002 83 aaKnown RBP13.53□□□□□ -0.24
NDEL1-207ENST00000580012 HSD52Q0P140 79 aa13.53□□□□□ -0.24
NDEL1-207ENST00000580012 PRR26Q8N8Z3 221 aa13.53□□□□□ -0.24
NDEL1-207ENST00000580012 C12orf57Q99622 126 aa13.53□□□□□ -0.24
NDEL1-207ENST00000580012 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
NDEL1-207ENST00000580012 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
NDEL1-207ENST00000580012 COX7BP24311 80 aa13.51□□□□□ -0.25
NDEL1-207ENST00000580012 FXYD2P54710 66 aa13.51□□□□□ -0.25
NDEL1-207ENST00000580012 SPRR4Q96PI1 79 aa13.51□□□□□ -0.25
NDEL1-207ENST00000580012 FAM229BQ4G0N7 80 aa13.5□□□□□ -0.25
NDEL1-207ENST00000580012 ANAPC11Q9NYG5 84 aa13.5□□□□□ -0.25
NDEL1-207ENST00000580012 A0A1B0GWB2 263 aa13.48□□□□□ -0.25
NDEL1-207ENST00000580012 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
NDEL1-207ENST00000580012 DHRS4-AS1Q9P1J3 65 aa13.48□□□□□ -0.25
NDEL1-207ENST00000580012 ZNF706Q9Y5V0 76 aaPredicted RBP13.48□□□□□ -0.25
NDEL1-207ENST00000580012 A0A087X002 238 aa13.47□□□□□ -0.25
NDEL1-207ENST00000580012 TMEM238LA0A1B0GVL6 79 aa13.47□□□□□ -0.25
NDEL1-207ENST00000580012 A6NJY4 79 aa13.47□□□□□ -0.25
NDEL1-207ENST00000580012 CRYGAP11844 174 aa13.46□□□□□ -0.25
NDEL1-207ENST00000580012 LINC00483Q53H64 154 aa13.45□□□□□ -0.26
NDEL1-207ENST00000580012 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
NDEL1-207ENST00000580012 HMCN2Q8NDA2 5059 aa13.44□□□□□ -0.26
NDEL1-207ENST00000580012 KRTAP13-2Q52LG2 175 aa13.42□□□□□ -0.26
NDEL1-207ENST00000580012 PRO1854Q9UHT4 67 aa13.42□□□□□ -0.26
NDEL1-207ENST00000580012 VAMP3Q15836 100 aa13.41□□□□□ -0.26
NDEL1-207ENST00000580012 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
NDEL1-207ENST00000580012 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
NDEL1-207ENST00000580012 ST20-AS1Q8NBB2 130 aa13.39□□□□□ -0.27
NDEL1-207ENST00000580012 H7C2G1 150 aa13.37□□□□□ -0.27
NDEL1-207ENST00000580012 LINC00575Q6W349 94 aa13.37□□□□□ -0.27
NDEL1-207ENST00000580012 NHP2Q9NX24 153 aaKnown RBP13.37□□□□□ -0.27
NDEL1-207ENST00000580012 SPRR1BP22528 89 aa13.36□□□□□ -0.27
NDEL1-207ENST00000580012 CTAG1AP78358 180 aa13.36□□□□□ -0.27
NDEL1-207ENST00000580012 TSTD3H0UI37 97 aa13.35□□□□□ -0.27
NDEL1-207ENST00000580012 TYMSOSQ8TAI1 123 aa13.34□□□□□ -0.27
NDEL1-207ENST00000580012 K7ERJ3 54 aa13.32□□□□□ -0.28
NDEL1-207ENST00000580012 C3orf22Q8N5N4 141 aa13.32□□□□□ -0.28
NDEL1-207ENST00000580012 UBR4Q5T4S7 5183 aa13.31□□□□□ -0.28
NDEL1-207ENST00000580012 LINC01547P58512 204 aaPredicted RBP13.3□□□□□ -0.28
NDEL1-207ENST00000580012 IGLV5-48A0A075B6I7 105 aa13.29□□□□□ -0.28
NDEL1-207ENST00000580012 H0YGX0 51 aa13.29□□□□□ -0.28
NDEL1-207ENST00000580012 SLC25A20O43772 301 aa13.29□□□□□ -0.28
NDEL1-207ENST00000580012 hADV29S1A0JD25 119 aa13.28□□□□□ -0.28
NDEL1-207ENST00000580012 M0R143 59 aa13.28□□□□□ -0.28
NDEL1-207ENST00000580012 Q1RN00 199 aa13.28□□□□□ -0.28
NDEL1-207ENST00000580012 TEX49A0A1B0GTD5 131 aa13.26□□□□□ -0.29
NDEL1-207ENST00000580012 TRIAP1O43715 76 aa13.25□□□□□ -0.29
NDEL1-207ENST00000580012 TSPAN13O95857 204 aa13.24□□□□□ -0.29
NDEL1-207ENST00000580012 DEFB105AQ8NG35 78 aa13.24□□□□□ -0.29
NDEL1-207ENST00000580012 SSBP3-AS1Q7Z2R9 100 aa13.23□□□□□ -0.29
NDEL1-207ENST00000580012 SMIM29Q86T20 159 aa13.23□□□□□ -0.29
NDEL1-207ENST00000580012 Q8N377 158 aa13.23□□□□□ -0.29
NDEL1-207ENST00000580012 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.22□□□□□ -0.29
NDEL1-207ENST00000580012 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
NDEL1-207ENST00000580012 IGLV9-49A0A0B4J1Y8 123 aa13.2□□□□□ -0.3
NDEL1-207ENST00000580012 Q6ZQY7 126 aa13.2□□□□□ -0.3
NDEL1-207ENST00000580012 LINC00304Q8N9R0 145 aa13.2□□□□□ -0.3
NDEL1-207ENST00000580012 LAMTOR3Q9UHA4 124 aa13.2□□□□□ -0.3
NDEL1-207ENST00000580012 A0A1B0GX51 115 aa13.19□□□□□ -0.3
NDEL1-207ENST00000580012 MOBPQ13875 183 aa13.19□□□□□ -0.3
NDEL1-207ENST00000580012 PSMB2P49721 201 aa13.17□□□□□ -0.3
NDEL1-207ENST00000580012 Q8NBF4 154 aa13.17□□□□□ -0.3
NDEL1-207ENST00000580012 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
NDEL1-207ENST00000580012 SNCGO76070 127 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms