RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 BAGE3Q86Y29 109 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 IGLV5-39A0A0G2JS06 123 aa5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 LOC105371267A0A1B0GV96 52 aa5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 LINC01549A6NIU2 74 aa5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
CTDNEP1-202ENST00000570380 C5orf52A6NGY3 159 aa5.47□□□□□ -1.53
CTDNEP1-202ENST00000570380 H3BRM9 83 aa5.47□□□□□ -1.53
CTDNEP1-202ENST00000570380 SERF1AO75920 110 aa5.47□□□□□ -1.53
CTDNEP1-202ENST00000570380 B5MCH6 92 aa5.46□□□□□ -1.54
CTDNEP1-202ENST00000570380 IGLC3P0DOY3 106 aa5.46□□□□□ -1.54
CTDNEP1-202ENST00000570380 Q6Q795 121 aa5.46□□□□□ -1.54
CTDNEP1-202ENST00000570380 C11orf86A6NJI1 115 aa5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 NCR3O14931 201 aa5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 HSBP1O75506 76 aa5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 COA6Q5JTJ3 125 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 Q9BRP9 147 aa5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 LIMD2Q9BT23 127 aa5.45□□□□□ -1.54
CTDNEP1-202ENST00000570380 FABP4P15090 132 aa5.44□□□□□ -1.54
CTDNEP1-202ENST00000570380 LINC00158P58513 81 aa5.44□□□□□ -1.54
CTDNEP1-202ENST00000570380 S100A12P80511 92 aa5.44□□□□□ -1.54
CTDNEP1-202ENST00000570380 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
CTDNEP1-202ENST00000570380 IFI27L1Q96BM0 104 aa5.44□□□□□ -1.54
CTDNEP1-202ENST00000570380 TRBV10-3A0A0K0K1G6 114 aa5.43□□□□□ -1.54
CTDNEP1-202ENST00000570380 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
CTDNEP1-202ENST00000570380 HIST3H2BBQ8N257 126 aa5.43□□□□□ -1.54
CTDNEP1-202ENST00000570380 CHTOPQ9Y3Y2 248 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-202ENST00000570380 C20orf202A1L168 122 aa5.42□□□□□ -1.54
CTDNEP1-202ENST00000570380 BOD1L2Q8IYS8 172 aa5.42□□□□□ -1.54
CTDNEP1-202ENST00000570380 C12orf57Q99622 126 aa5.42□□□□□ -1.54
CTDNEP1-202ENST00000570380 TRAV12-1A0A0B4J245 112 aa5.41□□□□□ -1.54
CTDNEP1-202ENST00000570380 H0Y8G0 127 aa5.41□□□□□ -1.54
CTDNEP1-202ENST00000570380 MT2AP02795 61 aa5.41□□□□□ -1.54
CTDNEP1-202ENST00000570380 TMEM170BQ5T4T1 132 aa5.41□□□□□ -1.54
CTDNEP1-202ENST00000570380 LEPROTL1O95214 131 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 SFTA2Q6UW10 78 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 Q6ZRX8 168 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 HIST1H2BLQ99880 126 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 HSPB8Q9UJY1 196 aa5.4□□□□□ -1.54
CTDNEP1-202ENST00000570380 TSTD3H0UI37 97 aa5.39□□□□□ -1.55
CTDNEP1-202ENST00000570380 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
CTDNEP1-202ENST00000570380 PMCHL2Q9BQD1 86 aa5.39□□□□□ -1.55
CTDNEP1-202ENST00000570380 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
CTDNEP1-202ENST00000570380 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
CTDNEP1-202ENST00000570380 SCGB1D1O95968 90 aa5.38□□□□□ -1.55
CTDNEP1-202ENST00000570380 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
CTDNEP1-202ENST00000570380 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
CTDNEP1-202ENST00000570380 MT1FP04733 61 aa5.37□□□□□ -1.55
CTDNEP1-202ENST00000570380 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
CTDNEP1-202ENST00000570380 KRTDAPP60985 99 aa5.37□□□□□ -1.55
CTDNEP1-202ENST00000570380 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
CTDNEP1-202ENST00000570380 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-202ENST00000570380 C1orf195Q5TG92 126 aa5.36□□□□□ -1.55
CTDNEP1-202ENST00000570380 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
CTDNEP1-202ENST00000570380 NEBP20929 6669 aa5.36□□□□□ -1.55
CTDNEP1-202ENST00000570380 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
CTDNEP1-202ENST00000570380 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
CTDNEP1-202ENST00000570380 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
CTDNEP1-202ENST00000570380 H7C2G1 150 aa5.34□□□□□ -1.55
CTDNEP1-202ENST00000570380 DPM2O94777 84 aa5.34□□□□□ -1.55
CTDNEP1-202ENST00000570380 DDTP30046 118 aa5.34□□□□□ -1.55
CTDNEP1-202ENST00000570380 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
CTDNEP1-202ENST00000570380 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
CTDNEP1-202ENST00000570380 IGKCP01834 107 aa5.33□□□□□ -1.56
CTDNEP1-202ENST00000570380 PLNP26678 52 aa5.33□□□□□ -1.56
CTDNEP1-202ENST00000570380 CD164Q04900 197 aa5.33□□□□□ -1.56
CTDNEP1-202ENST00000570380 PYY3Q5JQD4 70 aa5.33□□□□□ -1.56
CTDNEP1-202ENST00000570380 PCP4L1A6NKN8 68 aa5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 C3orf79P0CE67 100 aa5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 SPRR1BP22528 89 aa5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 Q5XG85 94 aa5.32□□□□□ -1.56
CTDNEP1-202ENST00000570380 LEPROTO15243 131 aa5.31□□□□□ -1.56
CTDNEP1-202ENST00000570380 LINC01545Q5VT33 79 aa5.31□□□□□ -1.56
CTDNEP1-202ENST00000570380 PET117Q6UWS5 81 aa5.31□□□□□ -1.56
CTDNEP1-202ENST00000570380 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
CTDNEP1-202ENST00000570380 J3QQQ9 107 aa5.3□□□□□ -1.56
CTDNEP1-202ENST00000570380 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
CTDNEP1-202ENST00000570380 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
CTDNEP1-202ENST00000570380 HERVK_113P61574 105 aa5.29□□□□□ -1.56
CTDNEP1-202ENST00000570380 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
CTDNEP1-202ENST00000570380 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 MYMXA0A1B0GTQ4 84 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 PAM16Q9Y3D7 125 aa5.28□□□□□ -1.56
CTDNEP1-202ENST00000570380 E9PLD3 99 aa5.27□□□□□ -1.57
CTDNEP1-202ENST00000570380 LGALS3P17931 250 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-202ENST00000570380 HERV-K104P63124 156 aa5.27□□□□□ -1.57
CTDNEP1-202ENST00000570380 SPATA45Q537H7 98 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms