RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MUC21A0A140T8X8 626 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 J3KT08 172 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 M0R378 163 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 IGLC6P0CF74 106 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 RAB5CP51148 216 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
CNOT1-221ENST00000569924 UBE2BP63146 152 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 Q5BKY6 102 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 BAGE2Q86Y30 109 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 Q8NDZ9 215 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 NIT2Q9NQR4 276 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 OSTCQ9NRP0 149 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 CYTL1Q9NRR1 136 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 LAMTOR2Q9Y2Q5 125 aa1.76□□□□□ -2.13
CNOT1-221ENST00000569924 IGHV1-58A0A0C4DH39 117 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 A0A1B0GX51 115 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 F2Z2F3 143 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 NCR2O95944 276 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 MGPP08493 103 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 TRGC1P0CF51 173 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 BCL2P10415 239 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 EIF5AP63241 154 aaKnown RBP1.75□□□□□ -2.13
CNOT1-221ENST00000569924 KRTAP13-2Q52LG2 175 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 LYZL1Q6UWQ5 148 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 PRR15Q8IV56 129 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 CARD19Q96LW7 228 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 HIST1H2BLQ99880 126 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 CNFNQ9BYD5 112 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
CNOT1-221ENST00000569924 KMT2DO14686 5537 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 FXYD6-FXYD2A0A087WZ82 144 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 LOC107984640A0A0U1RRK4 108 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 A0A1W2PNM2 257 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 UMAD1C9J7I0 102 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 G3V3Q6 166 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 H7C2G1 150 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 TMEM256-PLSCR3K7ERE1 68 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 TCL1BO95988 128 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 MT-ND6P03923 174 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 ZNF25P17030 456 aaPredicted RBP1.74□□□□□ -2.13
CNOT1-221ENST00000569924 RPL35P42766 123 aaKnown RBP1.74□□□□□ -2.13
CNOT1-221ENST00000569924 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 C9orf62Q8N4C0 152 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 KCNRGQ8N5I3 272 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 OR5A1Q8NGJ0 315 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 SFT2D1Q8WV19 159 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 LINC00167Q96N53 147 aa1.74□□□□□ -2.13
CNOT1-221ENST00000569924 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.73□□□□□ -2.13
CNOT1-221ENST00000569924 TRAV1-1A0A0B4J248 108 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 TRBV6-5A0A0K0K1A5 114 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 TRBV10-2A0A0K0K1G8 114 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 LINC00959A0A1B0GUT2 108 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 IGKV2-29A2NJV5 120 aaPredicted RBP1.73□□□□□ -2.13
CNOT1-221ENST00000569924 CCL25O15444 150 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 GNG4P50150 75 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 FXYD2P54710 66 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 ZNF345Q14585 488 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 SS18Q15532 418 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 FAM213BQ8TBF2 198 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 DIRC1Q969H9 104 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 TMEM126AQ9H061 195 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
CNOT1-221ENST00000569924 TRBV27A0A0K0K1C4 114 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 A0A1W2PNN7 141 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 SDHAF1A6NFY7 115 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 I3L3M4 83 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 LGALS3P17931 250 aaKnown RBP1.72□□□□□ -2.13
CNOT1-221ENST00000569924 CKS1BP61024 79 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 C9orf116Q5BN46 136 aaPredicted RBP1.72□□□□□ -2.13
CNOT1-221ENST00000569924 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 EIF5AL1Q6IS14 154 aaKnown RBP1.72□□□□□ -2.13
CNOT1-221ENST00000569924 HRCT1Q6UXD1 115 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 TSKUQ8WUA8 353 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 RPL39LQ96EH5 51 aaKnown RBP1.72□□□□□ -2.13
CNOT1-221ENST00000569924 LINC00526Q96FQ7 95 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 GNG13Q9P2W3 67 aa1.72□□□□□ -2.13
CNOT1-221ENST00000569924 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 KANTRA0A1W2PQU2 76 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 C7orf77A4D0Y5 90 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 HMSDA8MTL9 139 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 KRTAP5-9P26371 169 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 POLR2KP53803 58 aaKnown RBP1.71□□□□□ -2.14
CNOT1-221ENST00000569924 FOXA3P55318 350 aaPredicted RBP1.71□□□□□ -2.14
CNOT1-221ENST00000569924 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
CNOT1-221ENST00000569924 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 PHF5AQ7RTV0 110 aaKnown RBP1.71□□□□□ -2.14
CNOT1-221ENST00000569924 ST20Q9HBF5 79 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 MED9Q9NWA0 146 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 TMEM242Q9NWH2 141 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 MRPL35Q9NZE8 188 aaKnown RBP1.71□□□□□ -2.14
CNOT1-221ENST00000569924 MUC17Q685J3 4493 aa1.71□□□□□ -2.14
CNOT1-221ENST00000569924 PPP1R17O96001 155 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 UBE2D1P51668 147 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 SPAG11BQ08648 103 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 NDUFA5Q16718 116 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 Q9BRP9 147 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 TMEM191AQ9H0A3 160 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms