RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 Q8N8P6 123 aa3.99□□□□□ -1.77
LINC00556-201ENST00000569603 GTSF1Q8WW33 167 aa3.99□□□□□ -1.77
LINC00556-201ENST00000569603 KRTAP4-16G5E9R7 235 aaPredicted RBP3.98□□□□□ -1.77
LINC00556-201ENST00000569603 NUPR1O60356 82 aa3.98□□□□□ -1.77
LINC00556-201ENST00000569603 MGST1P10620 155 aaKnown RBP3.98□□□□□ -1.77
LINC00556-201ENST00000569603 CRIP1P50238 77 aa3.98□□□□□ -1.77
LINC00556-201ENST00000569603 C2orf66Q6UXQ4 117 aa3.98□□□□□ -1.77
LINC00556-201ENST00000569603 TMEM136Q6ZRR5 245 aa3.98□□□□□ -1.77
LINC00556-201ENST00000569603 A0A087X002 238 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 IGHV3-30P01768 117 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 IGHV3-33P01772 117 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 IGHV3-30-3P0DP02 117 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 IGHV3-30-5P0DP03 117 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
LINC00556-201ENST00000569603 CYB561D1Q8N8Q1 229 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 Q8N976 141 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
LINC00556-201ENST00000569603 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
LINC00556-201ENST00000569603 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 IGLV8-61A0A075B6I0 122 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 SERF2P84101 59 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 Q86TA4 180 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 CLEC2BQ92478 149 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 TMEM167BQ9NRX6 74 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 ARL2-SNX15V9GYD0 113 aa3.96□□□□□ -1.78
LINC00556-201ENST00000569603 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 TRBV6-1A0A0K0K1D8 114 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 A6NN06 94 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 PSCAO43653 123 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 CCKP06307 115 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
LINC00556-201ENST00000569603 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
LINC00556-201ENST00000569603 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
LINC00556-201ENST00000569603 H3BVH4 76 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 LECT2O14960 151 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 UBE2D3P61077 147 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 UBE2G1P62253 170 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 UBE2D2P62837 147 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 KRTAP26-1Q6PEX3 210 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 C7orf33Q8WU49 177 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 PHLDA3Q9Y5J5 127 aa3.94□□□□□ -1.78
LINC00556-201ENST00000569603 IGHV1-24A0A0C4DH33 117 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 TRBV10-1A0A0K0K1A3 114 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 CTXND1A0A1B0GTU2 59 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 NDUFC1O43677 76 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 SH2D1AO60880 128 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 ACYP1P07311 99 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 ARMS2P0C7Q2 107 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 RBM3P98179 157 aaKnown RBP3.93□□□□□ -1.78
LINC00556-201ENST00000569603 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 CHCHD7Q9BUK0 85 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 TTTY13Q9BZ97 58 aa3.93□□□□□ -1.78
LINC00556-201ENST00000569603 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
LINC00556-201ENST00000569603 K7ERS5 55 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 Q1T7F1 81 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 ENHOQ6UWT2 76 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
LINC00556-201ENST00000569603 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 NTM-AS1Q6ZSK4 140 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 PRR34Q9NV39 138 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
LINC00556-201ENST00000569603 KLK12Q9UKR0 248 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 KIF25-AS1Q9Y6Z4 181 aa3.91□□□□□ -1.78
LINC00556-201ENST00000569603 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 TRBV6-8A0A0A6YYG3 113 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 F2Z2F3 143 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 PANO1I0J062 215 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
LINC00556-201ENST00000569603 SPANXN1Q5VSR9 72 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 MANBALQ9NQG1 85 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 HIGD1BQ9P298 99 aa3.9□□□□□ -1.79
LINC00556-201ENST00000569603 COX8AP10176 69 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 MT3P25713 68 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 FAM74A4Q5TZK3 123 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 LINC00643Q86TS7 51 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 GNG13Q9P2W3 67 aa3.89□□□□□ -1.79
LINC00556-201ENST00000569603 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
LINC00556-201ENST00000569603 BCE1O60756 84 aa3.88□□□□□ -1.79
LINC00556-201ENST00000569603 RPL36AP83881 106 aaKnown RBP3.88□□□□□ -1.79
LINC00556-201ENST00000569603 SDIM1Q6ZPB5 146 aa3.88□□□□□ -1.79
LINC00556-201ENST00000569603 C9orf163Q8N9P6 203 aa3.88□□□□□ -1.79
LINC00556-201ENST00000569603 LINC00474Q9P2X8 69 aa3.88□□□□□ -1.79
LINC00556-201ENST00000569603 M0QY20 66 aa3.87□□□□□ -1.79
LINC00556-201ENST00000569603 SERF1AO75920 110 aa3.87□□□□□ -1.79
LINC00556-201ENST00000569603 C3orf79P0CE67 100 aa3.87□□□□□ -1.79
LINC00556-201ENST00000569603 CNBPP62633 177 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms