RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 RAB37Q96AX2 223 aa6.32□□□□□ -1.4
HERPUD1-216ENST00000568814 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-216ENST00000568814 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
HERPUD1-216ENST00000568814 BCE1O60756 84 aa6.31□□□□□ -1.4
HERPUD1-216ENST00000568814 CTAG1AP78358 180 aa6.31□□□□□ -1.4
HERPUD1-216ENST00000568814 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
HERPUD1-216ENST00000568814 ZNF73O43830 326 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-216ENST00000568814 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
HERPUD1-216ENST00000568814 CFC1P0CG37 223 aa6.3□□□□□ -1.4
HERPUD1-216ENST00000568814 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 SPRR1AP35321 89 aa6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 RPL13AP40429 203 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 BVES-AS1Q5T3Y7 98 aa6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 DIRC1Q969H9 104 aa6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-216ENST00000568814 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 RPL28P46779 137 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 UBE2AP49459 152 aa6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 FAM19A1Q7Z5A9 133 aa6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 PRO1854Q9UHT4 67 aa6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-216ENST00000568814 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
HERPUD1-216ENST00000568814 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-216ENST00000568814 H0Y9J4 135 aa6.27□□□□□ -1.41
HERPUD1-216ENST00000568814 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-216ENST00000568814 ZNF861PO60384 105 aa6.26□□□□□ -1.41
HERPUD1-216ENST00000568814 SMIM11BQ8TCY0 68 aa6.26□□□□□ -1.41
HERPUD1-216ENST00000568814 VAMP3Q15836 100 aa6.25□□□□□ -1.41
HERPUD1-216ENST00000568814 Q1RN00 199 aa6.25□□□□□ -1.41
HERPUD1-216ENST00000568814 C6orf99Q4VX62 202 aa6.25□□□□□ -1.41
HERPUD1-216ENST00000568814 Q6ZRX8 168 aa6.25□□□□□ -1.41
HERPUD1-216ENST00000568814 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
HERPUD1-216ENST00000568814 B5MCH6 92 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 H7C2G1 150 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 K7ERJ3 54 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 COX7BP24311 80 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 PRLHP81277 87 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
HERPUD1-216ENST00000568814 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
HERPUD1-216ENST00000568814 INAFM2P0DMQ5 153 aa6.22□□□□□ -1.41
HERPUD1-216ENST00000568814 BATFQ16520 125 aa6.22□□□□□ -1.41
HERPUD1-216ENST00000568814 HIGD2AQ9BW72 106 aa6.22□□□□□ -1.41
HERPUD1-216ENST00000568814 PCP4L1A6NKN8 68 aa6.2□□□□□ -1.42
HERPUD1-216ENST00000568814 H0YGX0 51 aa6.2□□□□□ -1.42
HERPUD1-216ENST00000568814 TSPAN13O95857 204 aa6.2□□□□□ -1.42
HERPUD1-216ENST00000568814 COX6CP09669 75 aa6.2□□□□□ -1.42
HERPUD1-216ENST00000568814 ZNF706Q9Y5V0 76 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-216ENST00000568814 SLC25A20O43772 301 aa6.19□□□□□ -1.42
HERPUD1-216ENST00000568814 SNCGO76070 127 aa6.19□□□□□ -1.42
HERPUD1-216ENST00000568814 PSMB2P49721 201 aa6.19□□□□□ -1.42
HERPUD1-216ENST00000568814 SMCR5Q8TEV8 140 aa6.19□□□□□ -1.42
HERPUD1-216ENST00000568814 Q9BRP9 147 aa6.19□□□□□ -1.42
HERPUD1-216ENST00000568814 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
HERPUD1-216ENST00000568814 TRIAP1O43715 76 aa6.18□□□□□ -1.42
HERPUD1-216ENST00000568814 FAT1Q14517 4588 aa6.17□□□□□ -1.42
HERPUD1-216ENST00000568814 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
HERPUD1-216ENST00000568814 LINC00575Q6W349 94 aa6.17□□□□□ -1.42
HERPUD1-216ENST00000568814 SNHG12Q9BXW3 62 aa6.17□□□□□ -1.42
HERPUD1-216ENST00000568814 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-216ENST00000568814 A0A1B0GX51 115 aa6.16□□□□□ -1.42
HERPUD1-216ENST00000568814 LYRM7Q5U5X0 104 aa6.16□□□□□ -1.42
HERPUD1-216ENST00000568814 hADV29S1A0JD25 119 aa6.15□□□□□ -1.42
HERPUD1-216ENST00000568814 COL5A1-AS1Q5SY13 56 aa6.15□□□□□ -1.42
HERPUD1-216ENST00000568814 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
HERPUD1-216ENST00000568814 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
HERPUD1-216ENST00000568814 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
HERPUD1-216ENST00000568814 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
HERPUD1-216ENST00000568814 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
HERPUD1-216ENST00000568814 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
HERPUD1-216ENST00000568814 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-216ENST00000568814 GHRHP01286 108 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 LINC00483Q53H64 154 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 OCIAD2Q56VL3 154 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 CLEC2BQ92478 149 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
HERPUD1-216ENST00000568814 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 H3BUT2 72 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 DNAL4O96015 105 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 OXTP01178 125 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 GAGE2AQ6NT46 116 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 Q6ZQY7 126 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 ST20-AS1Q8NBB2 130 aa6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 NAA38Q9BRA0 125 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 FLG2Q5D862 2391 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-216ENST00000568814 IGLV5-48A0A075B6I7 105 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 LST1O00453 97 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 TRACP01848 142 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 CRYGAP11844 174 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 SPRR1BP22528 89 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
HERPUD1-216ENST00000568814 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
HERPUD1-216ENST00000568814 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
HERPUD1-216ENST00000568814 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
HERPUD1-216ENST00000568814 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms