RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 TRAV23DV6A0A075B6W5 121 aa12.36□□□□□ -0.43
RNF40-210ENST00000566811 KRTAP13-1Q8IUC0 172 aa12.36□□□□□ -0.43
RNF40-210ENST00000566811 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
RNF40-210ENST00000566811 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
RNF40-210ENST00000566811 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
RNF40-210ENST00000566811 TAL2Q16559 108 aa12.34□□□□□ -0.43
RNF40-210ENST00000566811 OR13C6PQ8NH95 151 aa12.34□□□□□ -0.43
RNF40-210ENST00000566811 KRTAP29-1A8MX34 341 aaPredicted RBP12.33□□□□□ -0.44
RNF40-210ENST00000566811 HINT1P49773 126 aaPredicted RBP12.32□□□□□ -0.44
RNF40-210ENST00000566811 C2orf91Q6ZV80 131 aa12.32□□□□□ -0.44
RNF40-210ENST00000566811 UQCR10Q9UDW1 63 aa12.32□□□□□ -0.44
RNF40-210ENST00000566811 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
RNF40-210ENST00000566811 ZNF73O43830 326 aaPredicted RBP12.31□□□□□ -0.44
RNF40-210ENST00000566811 A4D1N5 150 aa12.29□□□□□ -0.44
RNF40-210ENST00000566811 PRLHP81277 87 aa12.29□□□□□ -0.44
RNF40-210ENST00000566811 TMEM238LA0A1B0GVL6 79 aa12.28□□□□□ -0.44
RNF40-210ENST00000566811 A6NDN8 102 aa12.28□□□□□ -0.44
RNF40-210ENST00000566811 A6NJY4 79 aa12.28□□□□□ -0.44
RNF40-210ENST00000566811 Q6ZRX8 168 aa12.27□□□□□ -0.45
RNF40-210ENST00000566811 LOC105371267A0A1B0GV96 52 aa12.26□□□□□ -0.45
RNF40-210ENST00000566811 LINC01600Q96MT4 127 aa12.26□□□□□ -0.45
RNF40-210ENST00000566811 B5MCH6 92 aa12.25□□□□□ -0.45
RNF40-210ENST00000566811 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
RNF40-210ENST00000566811 HSD52Q0P140 79 aa12.24□□□□□ -0.45
RNF40-210ENST00000566811 CEND1Q8N111 149 aa12.24□□□□□ -0.45
RNF40-210ENST00000566811 ZNF706Q9Y5V0 76 aaPredicted RBP12.24□□□□□ -0.45
RNF40-210ENST00000566811 HIGD2AQ9BW72 106 aa12.23□□□□□ -0.45
RNF40-210ENST00000566811 FAT3Q8TDW7 4589 aa12.23□□□□□ -0.45
RNF40-210ENST00000566811 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
RNF40-210ENST00000566811 HMCN2Q8NDA2 5059 aa12.22□□□□□ -0.45
RNF40-210ENST00000566811 A0A0B4J2C4 111 aa12.21□□□□□ -0.45
RNF40-210ENST00000566811 KRTAP1-4P0C5Y4 121 aa12.2□□□□□ -0.46
RNF40-210ENST00000566811 C6orf99Q4VX62 202 aa12.2□□□□□ -0.46
RNF40-210ENST00000566811 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
RNF40-210ENST00000566811 RPL13AP40429 203 aaKnown RBP12.19□□□□□ -0.46
RNF40-210ENST00000566811 ELOF1P60002 83 aaKnown RBP12.19□□□□□ -0.46
RNF40-210ENST00000566811 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
RNF40-210ENST00000566811 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
RNF40-210ENST00000566811 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
RNF40-210ENST00000566811 COX7BP24311 80 aa12.17□□□□□ -0.46
RNF40-210ENST00000566811 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
RNF40-210ENST00000566811 UBR4Q5T4S7 5183 aa12.16□□□□□ -0.46
RNF40-210ENST00000566811 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
RNF40-210ENST00000566811 CFC1P0CG37 223 aa12.16□□□□□ -0.46
RNF40-210ENST00000566811 SMIM11BQ8TCY0 68 aa12.16□□□□□ -0.46
RNF40-210ENST00000566811 C12orf57Q99622 126 aa12.16□□□□□ -0.46
RNF40-210ENST00000566811 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
RNF40-210ENST00000566811 VAMP3Q15836 100 aa12.15□□□□□ -0.46
RNF40-210ENST00000566811 Q9BRP9 147 aa12.15□□□□□ -0.46
RNF40-210ENST00000566811 NHP2Q9NX24 153 aaKnown RBP12.14□□□□□ -0.47
RNF40-210ENST00000566811 FXYD2P54710 66 aa12.13□□□□□ -0.47
RNF40-210ENST00000566811 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
RNF40-210ENST00000566811 CRYGAP11844 174 aa12.12□□□□□ -0.47
RNF40-210ENST00000566811 BVES-AS1Q5T3Y7 98 aa12.12□□□□□ -0.47
RNF40-210ENST00000566811 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
RNF40-210ENST00000566811 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
RNF40-210ENST00000566811 KRTAP10-8P60410 259 aa12.1□□□□□ -0.47
RNF40-210ENST00000566811 PRO1854Q9UHT4 67 aa12.1□□□□□ -0.47
RNF40-210ENST00000566811 LINC00483Q53H64 154 aa12.08□□□□□ -0.48
RNF40-210ENST00000566811 TNXBP22105 4242 aa12.08□□□□□ -0.48
RNF40-210ENST00000566811 M0R143 59 aa12.07□□□□□ -0.48
RNF40-210ENST00000566811 SLC25A20O43772 301 aa12.07□□□□□ -0.48
RNF40-210ENST00000566811 PRR26Q8N8Z3 221 aa12.07□□□□□ -0.48
RNF40-210ENST00000566811 ERC2-IT1O76042 136 aa12.06□□□□□ -0.48
RNF40-210ENST00000566811 Q1RN00 199 aa12.05□□□□□ -0.48
RNF40-210ENST00000566811 A0A087X002 238 aa12.04□□□□□ -0.48
RNF40-210ENST00000566811 H7C2G1 150 aa12.03□□□□□ -0.48
RNF40-210ENST00000566811 H0YGX0 51 aa12.01□□□□□ -0.49
RNF40-210ENST00000566811 SNCGO76070 127 aa12.01□□□□□ -0.49
RNF40-210ENST00000566811 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
RNF40-210ENST00000566811 TYMSOSQ8TAI1 123 aa12.01□□□□□ -0.49
RNF40-210ENST00000566811 SPRR1BP22528 89 aa12□□□□□ -0.49
RNF40-210ENST00000566811 CTAG1AP78358 180 aa12□□□□□ -0.49
RNF40-210ENST00000566811 LINC00575Q6W349 94 aa12□□□□□ -0.49
RNF40-210ENST00000566811 ANAPC11Q9NYG5 84 aa11.99□□□□□ -0.49
RNF40-210ENST00000566811 hADV29S1A0JD25 119 aa11.98□□□□□ -0.49
RNF40-210ENST00000566811 KRTAP13-2Q52LG2 175 aa11.97□□□□□ -0.49
RNF40-210ENST00000566811 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
RNF40-210ENST00000566811 A0A1B0GX51 115 aa11.96□□□□□ -0.49
RNF40-210ENST00000566811 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
RNF40-210ENST00000566811 IGLV5-48A0A075B6I7 105 aa11.95□□□□□ -0.5
RNF40-210ENST00000566811 K7ERJ3 54 aa11.95□□□□□ -0.5
RNF40-210ENST00000566811 COX6CP09669 75 aa11.95□□□□□ -0.5
RNF40-210ENST00000566811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
RNF40-210ENST00000566811 TRIAP1O43715 76 aa11.92□□□□□ -0.5
RNF40-210ENST00000566811 TSPAN13O95857 204 aa11.92□□□□□ -0.5
RNF40-210ENST00000566811 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
RNF40-210ENST00000566811 LAMTOR3Q9UHA4 124 aa11.92□□□□□ -0.5
RNF40-210ENST00000566811 GHRHP01286 108 aa11.91□□□□□ -0.5
RNF40-210ENST00000566811 PSMB2P49721 201 aa11.91□□□□□ -0.5
RNF40-210ENST00000566811 OCIAD2Q56VL3 154 aa11.91□□□□□ -0.5
RNF40-210ENST00000566811 C3orf22Q8N5N4 141 aa11.91□□□□□ -0.5
RNF40-210ENST00000566811 Q6ZQY7 126 aa11.9□□□□□ -0.5
RNF40-210ENST00000566811 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
RNF40-210ENST00000566811 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
RNF40-210ENST00000566811 Q8NBF4 154 aa11.89□□□□□ -0.51
RNF40-210ENST00000566811 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
RNF40-210ENST00000566811 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
RNF40-210ENST00000566811 IGLV9-49A0A0B4J1Y8 123 aa11.87□□□□□ -0.51
RNF40-210ENST00000566811 DEFB105AQ8NG35 78 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms