RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C14orf144Q96I85 54 aa9.4□□□□□ -0.9
RNF40-205ENST00000563909 CDIP1Q9H305 208 aa9.4□□□□□ -0.9
RNF40-205ENST00000563909 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
RNF40-205ENST00000563909 NCR3O14931 201 aa9.39□□□□□ -0.91
RNF40-205ENST00000563909 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
RNF40-205ENST00000563909 S100A12P80511 92 aa9.39□□□□□ -0.91
RNF40-205ENST00000563909 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
RNF40-205ENST00000563909 IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
RNF40-205ENST00000563909 IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
RNF40-205ENST00000563909 SLC25A34Q6PIV7 304 aa9.38□□□□□ -0.91
RNF40-205ENST00000563909 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
RNF40-205ENST00000563909 S100A7L2Q5SY68 101 aa9.35□□□□□ -0.91
RNF40-205ENST00000563909 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
RNF40-205ENST00000563909 BCE1O60756 84 aa9.34□□□□□ -0.91
RNF40-205ENST00000563909 DDTP30046 118 aa9.34□□□□□ -0.91
RNF40-205ENST00000563909 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
RNF40-205ENST00000563909 TRBV10-3A0A0K0K1G6 114 aa9.33□□□□□ -0.92
RNF40-205ENST00000563909 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
RNF40-205ENST00000563909 TMEM126AQ9H061 195 aa9.33□□□□□ -0.92
RNF40-205ENST00000563909 LOC105371267A0A1B0GV96 52 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 PRYO14603 147 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
RNF40-205ENST00000563909 IGLV6-57P01721 117 aa9.31□□□□□ -0.92
RNF40-205ENST00000563909 ZNF861PO60384 105 aa9.3□□□□□ -0.92
RNF40-205ENST00000563909 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
RNF40-205ENST00000563909 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
RNF40-205ENST00000563909 RPL28P46779 137 aaKnown RBP9.29□□□□□ -0.92
RNF40-205ENST00000563909 UBE2AP49459 152 aa9.29□□□□□ -0.92
RNF40-205ENST00000563909 C2orf91Q6ZV80 131 aa9.29□□□□□ -0.92
RNF40-205ENST00000563909 SPRR1AP35321 89 aa9.28□□□□□ -0.92
RNF40-205ENST00000563909 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
RNF40-205ENST00000563909 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
RNF40-205ENST00000563909 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 A4D1N5 150 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 KRTAP9-7A8MTY7 169 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 CRYGAP11844 174 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 TAL2Q16559 108 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
RNF40-205ENST00000563909 TRAV13-2A0A0B4J235 113 aa9.26□□□□□ -0.93
RNF40-205ENST00000563909 IGLV7-46A0A075B6I9 117 aa9.25□□□□□ -0.93
RNF40-205ENST00000563909 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
RNF40-205ENST00000563909 A6NDN8 102 aa9.25□□□□□ -0.93
RNF40-205ENST00000563909 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
RNF40-205ENST00000563909 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
RNF40-205ENST00000563909 A0A087X002 238 aa9.23□□□□□ -0.93
RNF40-205ENST00000563909 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
RNF40-205ENST00000563909 ZNF73O43830 326 aaPredicted RBP9.23□□□□□ -0.93
RNF40-205ENST00000563909 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
RNF40-205ENST00000563909 PRLHP81277 87 aa9.23□□□□□ -0.93
RNF40-205ENST00000563909 CEND1Q8N111 149 aa9.23□□□□□ -0.93
RNF40-205ENST00000563909 HSD52Q0P140 79 aa9.21□□□□□ -0.94
RNF40-205ENST00000563909 PRO1933Q9H354 126 aa9.21□□□□□ -0.94
RNF40-205ENST00000563909 TMEM238LA0A1B0GVL6 79 aa9.2□□□□□ -0.94
RNF40-205ENST00000563909 A6NJY4 79 aa9.2□□□□□ -0.94
RNF40-205ENST00000563909 B5MCH6 92 aa9.2□□□□□ -0.94
RNF40-205ENST00000563909 C12orf57Q99622 126 aa9.2□□□□□ -0.94
RNF40-205ENST00000563909 HIGD2AQ9BW72 106 aa9.19□□□□□ -0.94
RNF40-205ENST00000563909 Q6ZRX8 168 aa9.18□□□□□ -0.94
RNF40-205ENST00000563909 CFC1BP0CG36 223 aa9.17□□□□□ -0.94
RNF40-205ENST00000563909 CFC1P0CG37 223 aa9.17□□□□□ -0.94
RNF40-205ENST00000563909 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
RNF40-205ENST00000563909 RAB37Q96AX2 223 aa9.17□□□□□ -0.94
RNF40-205ENST00000563909 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
RNF40-205ENST00000563909 A0A0B4J2C4 111 aa9.16□□□□□ -0.94
RNF40-205ENST00000563909 TRBV7-6A0A0J9YX20 115 aa9.16□□□□□ -0.94
RNF40-205ENST00000563909 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
RNF40-205ENST00000563909 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
RNF40-205ENST00000563909 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
RNF40-205ENST00000563909 COX7BP24311 80 aa9.15□□□□□ -0.94
RNF40-205ENST00000563909 FXYD2P54710 66 aa9.15□□□□□ -0.94
RNF40-205ENST00000563909 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
RNF40-205ENST00000563909 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
RNF40-205ENST00000563909 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
RNF40-205ENST00000563909 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
RNF40-205ENST00000563909 VAMP3Q15836 100 aa9.13□□□□□ -0.95
RNF40-205ENST00000563909 Q9BRP9 147 aa9.13□□□□□ -0.95
RNF40-205ENST00000563909 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
RNF40-205ENST00000563909 LINC00304Q8N9R0 145 aa9.12□□□□□ -0.95
RNF40-205ENST00000563909 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
RNF40-205ENST00000563909 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
RNF40-205ENST00000563909 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
RNF40-205ENST00000563909 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
RNF40-205ENST00000563909 NHP2Q9NX24 153 aaKnown RBP9.1□□□□□ -0.95
RNF40-205ENST00000563909 H7C2G1 150 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 CTAG1AP78358 180 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 BVES-AS1Q5T3Y7 98 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
RNF40-205ENST00000563909 M0R143 59 aa9.08□□□□□ -0.96
RNF40-205ENST00000563909 Q1RN00 199 aa9.08□□□□□ -0.96
RNF40-205ENST00000563909 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
RNF40-205ENST00000563909 SLC25A20O43772 301 aa9.05□□□□□ -0.96
RNF40-205ENST00000563909 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
RNF40-205ENST00000563909 GAGE2AQ6NT46 116 aa9.04□□□□□ -0.96
RNF40-205ENST00000563909 K7ERJ3 54 aa9.03□□□□□ -0.96
RNF40-205ENST00000563909 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms