RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CELSR1Q9NYQ6 3014 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 FOCADQ5VW36 1801 aa0.48□□□□□ -2.33
LINC00557-201ENST00000563184 AKAP9Q99996 3911 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 AKAP12Q02952 1782 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 MXRA5Q9NR99 2828 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 KMT2CQ8NEZ4 4911 aaKnown RBP0.47□□□□□ -2.33
LINC00557-201ENST00000563184 TIAM2Q8IVF5 1701 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 IFT172Q9UG01 1749 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 WNK1Q9H4A3 2382 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 COL4A6Q14031 1691 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 BSNQ9UPA5 3926 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 TRAV1-2A0A0B4J238 106 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 A0A0D9SFI3 127 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 CTXND1A0A1B0GTU2 59 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 IGLC7A0M8Q6 106 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 S100A10P60903 97 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 NXT2Q9NPJ8 142 aaKnown RBP0.47□□□□□ -2.33
LINC00557-201ENST00000563184 MANBALQ9NQG1 85 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 FAIMQ9NVQ4 179 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 LINC00474Q9P2X8 69 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 RYR3Q15413 4870 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
LINC00557-201ENST00000563184 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 PPLO60437 1756 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.47□□□□□ -2.33
LINC00557-201ENST00000563184 TJP1Q07157 1748 aa0.47□□□□□ -2.33
LINC00557-201ENST00000563184 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TGP01266 2768 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TRAV22A0A0B4J277 110 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 MPC2O95563 127 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 MGPP08493 103 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TRAPPC2P0DI81 140 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TRAPPC2BP0DI82 140 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 SAA2P0DJI9 122 aaPredicted RBP0.46□□□□□ -2.34
LINC00557-201ENST00000563184 UBE2D3P61077 147 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 UBE2D2P62837 147 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 SEC11AP67812 179 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 Q0VG73 95 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 CFAP126Q5VTH2 177 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 UBE2DNLQ8IWF7 75 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TSLPQ969D9 159 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 HERC2O95714 4834 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 LOC285556D6RIA3 1793 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TENM2Q9NT68 2774 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 TNCP24821 2201 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 MON2Q7Z3U7 1717 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
LINC00557-201ENST00000563184 WNK3Q9BYP7 1800 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 F5P12259 2224 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 SCN11AQ9UI33 1791 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 ARFGEF2Q9Y6D5 1785 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 VWFP04275 2813 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 LRRC37A2A6NM11 1700 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 DOT1LQ8TEK3 1739 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 CRYM-AS1A6NIL9 109 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 ATOX1O00244 68 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 GNGT2O14610 69 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 BCE1O60756 84 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 ASIPP42127 132 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 UBA52P62987 128 aaKnown RBP0.45□□□□□ -2.34
LINC00557-201ENST00000563184 NCMAPQ5T1S8 102 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 DEFB124Q8NES8 71 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 TMEM263Q8WUH6 116 aaKnown RBP0.45□□□□□ -2.34
LINC00557-201ENST00000563184 TRGV9Q99603 122 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 VAMP8Q9BV40 100 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 NPVFQ9HCQ7 196 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 LINC00846Q9NV44 126 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 PHIPQ8WWQ0 1821 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
LINC00557-201ENST00000563184 CSMD2Q7Z408 3487 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 DOPEY2Q9Y3R5 2298 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 GOLGA4Q13439 2230 aaKnown RBP0.44□□□□□ -2.34
LINC00557-201ENST00000563184 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 PARP14Q460N5 1801 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 hADV29S1A0JD25 119 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 GYPAP02724 150 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 COX6A2Q02221 97 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 HMGN3Q15651 99 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 ALKAL2Q6UX46 152 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 SERP2Q8N6R1 65 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 Q9H521 79 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 ARL2-SNX15V9GYD0 113 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 V9GYS6 101 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 RYR2Q92736 4967 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 MUC22E2RYF6 1773 aaPredicted RBP0.44□□□□□ -2.34
LINC00557-201ENST00000563184 HERC1Q15751 4861 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
LINC00557-201ENST00000563184 LRRC37AA6NMS7 1700 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 DDX60LQ5H9U9 1706 aaKnown RBP0.44□□□□□ -2.34
LINC00557-201ENST00000563184 DDX60Q8IY21 1712 aaKnown RBP0.44□□□□□ -2.34
LINC00557-201ENST00000563184 ARAP2Q8WZ64 1704 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 ANKRD26Q9UPS8 1709 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 TANC1Q9C0D5 1861 aa0.44□□□□□ -2.34
LINC00557-201ENST00000563184 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
LINC00557-201ENST00000563184 KNL1Q8NG31 2342 aa0.43□□□□□ -2.34
LINC00557-201ENST00000563184 ZNF236Q9UL36 1845 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 745.7 ms