RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TMEM258P61165 79 aa6.13□□□□□ -1.43
LINC00838-201ENST00000562956 STARD9Q9P2P6 4700 aa6.13□□□□□ -1.43
LINC00838-201ENST00000562956 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
LINC00838-201ENST00000562956 Q5XG85 94 aa6.12□□□□□ -1.43
LINC00838-201ENST00000562956 DNAH10Q8IVF4 4471 aa6.12□□□□□ -1.43
LINC00838-201ENST00000562956 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
LINC00838-201ENST00000562956 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
LINC00838-201ENST00000562956 C20orf197Q8N268 126 aa6.12□□□□□ -1.43
LINC00838-201ENST00000562956 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
LINC00838-201ENST00000562956 GHRHP01286 108 aa6.11□□□□□ -1.43
LINC00838-201ENST00000562956 FBN3Q75N90 2809 aa6.1□□□□□ -1.43
LINC00838-201ENST00000562956 PSCAO43653 123 aa6.1□□□□□ -1.43
LINC00838-201ENST00000562956 TLX1NBP0CAT3 122 aa6.1□□□□□ -1.43
LINC00838-201ENST00000562956 NBDYA0A0U1RRE5 68 aa6.1□□□□□ -1.43
LINC00838-201ENST00000562956 M0R378 163 aa6.09□□□□□ -1.43
LINC00838-201ENST00000562956 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
LINC00838-201ENST00000562956 Q6JHZ5 121 aa6.09□□□□□ -1.43
LINC00838-201ENST00000562956 Q8N814 137 aa6.08□□□□□ -1.44
LINC00838-201ENST00000562956 PKIGQ9Y2B9 76 aa6.08□□□□□ -1.44
LINC00838-201ENST00000562956 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
LINC00838-201ENST00000562956 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
LINC00838-201ENST00000562956 LINC00575Q6W349 94 aa6.07□□□□□ -1.44
LINC00838-201ENST00000562956 M0R2N4 97 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 LINC00336Q6ZUF6 198 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 DIRC1Q969H9 104 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
LINC00838-201ENST00000562956 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
LINC00838-201ENST00000562956 Q6ZRN7 208 aaPredicted RBP6.05□□□□□ -1.44
LINC00838-201ENST00000562956 NKAPP1Q8N9T2 125 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.05□□□□□ -1.44
LINC00838-201ENST00000562956 C7orf33Q8WU49 177 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 ORMDL1Q9P0S3 153 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 VPS13DQ5THJ4 4388 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 LRCOL1A6NCL2 159 aa6.05□□□□□ -1.44
LINC00838-201ENST00000562956 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
LINC00838-201ENST00000562956 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
LINC00838-201ENST00000562956 ELOF1P60002 83 aaKnown RBP6.03□□□□□ -1.44
LINC00838-201ENST00000562956 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
LINC00838-201ENST00000562956 COX7BP24311 80 aa6.03□□□□□ -1.44
LINC00838-201ENST00000562956 C14orf177Q52M58 125 aa6.03□□□□□ -1.44
LINC00838-201ENST00000562956 A0A096LNI7 61 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 KMT2AQ03164 3969 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 TRBV7-6A0A0J9YX20 115 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 CCKP06307 115 aa6.02□□□□□ -1.45
LINC00838-201ENST00000562956 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
LINC00838-201ENST00000562956 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
LINC00838-201ENST00000562956 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
LINC00838-201ENST00000562956 HAMPP81172 84 aa6.01□□□□□ -1.45
LINC00838-201ENST00000562956 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 TMEM256-PLSCR3K7ERE1 68 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 Q6ZQY7 126 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 TGP01266 2768 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 Q6ZR54 194 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 MRPL55Q7Z7F7 128 aaKnown RBP6□□□□□ -1.45
LINC00838-201ENST00000562956 LINC00474Q9P2X8 69 aa6□□□□□ -1.45
LINC00838-201ENST00000562956 SCXQ7RTU7 201 aa5.99□□□□□ -1.45
LINC00838-201ENST00000562956 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 CHTF8P0CG12 524 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 C9orf163Q8N9P6 203 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 H7BZZ5 65 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 F8WEM9 126 aa5.98□□□□□ -1.45
LINC00838-201ENST00000562956 RBM3P98179 157 aaKnown RBP5.98□□□□□ -1.45
LINC00838-201ENST00000562956 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
LINC00838-201ENST00000562956 LY6G6CO95867 125 aa5.97□□□□□ -1.45
LINC00838-201ENST00000562956 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
LINC00838-201ENST00000562956 PRYO14603 147 aa5.97□□□□□ -1.45
LINC00838-201ENST00000562956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.97□□□□□ -1.45
LINC00838-201ENST00000562956 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
LINC00838-201ENST00000562956 A0A087WTM6 91 aa5.96□□□□□ -1.45
LINC00838-201ENST00000562956 SPRR1AP35321 89 aa5.96□□□□□ -1.45
LINC00838-201ENST00000562956 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
LINC00838-201ENST00000562956 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
LINC00838-201ENST00000562956 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
LINC00838-201ENST00000562956 FUSP35637 526 aaKnown RBP eCLIP5.95□□□□□ -1.46
LINC00838-201ENST00000562956 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
LINC00838-201ENST00000562956 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
LINC00838-201ENST00000562956 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
LINC00838-201ENST00000562956 Q6ZRX8 168 aa5.95□□□□□ -1.46
LINC00838-201ENST00000562956 Q9BRP9 147 aa5.95□□□□□ -1.46
LINC00838-201ENST00000562956 ETDCA0A1B0GVM5 59 aa5.94□□□□□ -1.46
LINC00838-201ENST00000562956 PANO1I0J062 215 aa5.94□□□□□ -1.46
LINC00838-201ENST00000562956 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
LINC00838-201ENST00000562956 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
LINC00838-201ENST00000562956 H3BQ85 93 aa5.93□□□□□ -1.46
LINC00838-201ENST00000562956 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
LINC00838-201ENST00000562956 C1orf134Q5TEV5 83 aa5.93□□□□□ -1.46
LINC00838-201ENST00000562956 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
LINC00838-201ENST00000562956 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
LINC00838-201ENST00000562956 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
LINC00838-201ENST00000562956 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
LINC00838-201ENST00000562956 KRTAP11-1Q8IUC1 163 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms