RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HSBP1L1C9JCN9 74 aa6.09□□□□□ -1.43
HERC1-212ENST00000561348 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.43
HERC1-212ENST00000561348 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
HERC1-212ENST00000561348 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
HERC1-212ENST00000561348 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
HERC1-212ENST00000561348 A0A1B0GV90 55 aa6.08□□□□□ -1.44
HERC1-212ENST00000561348 ETDCA0A1B0GVM5 59 aa6.08□□□□□ -1.44
HERC1-212ENST00000561348 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
HERC1-212ENST00000561348 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
HERC1-212ENST00000561348 PRYO14603 147 aa6.06□□□□□ -1.44
HERC1-212ENST00000561348 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
HERC1-212ENST00000561348 SOSTDC1Q6X4U4 206 aa6.06□□□□□ -1.44
HERC1-212ENST00000561348 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
HERC1-212ENST00000561348 TSPAN13O95857 204 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 CRYGAP11844 174 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 RPL13AP40429 203 aaKnown RBP6.04□□□□□ -1.44
HERC1-212ENST00000561348 COL5A1-AS1Q5SY13 56 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 PCP2Q8IVA1 136 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 LINC00308Q8TCZ7 52 aa6.04□□□□□ -1.44
HERC1-212ENST00000561348 BATFQ16520 125 aa6.03□□□□□ -1.44
HERC1-212ENST00000561348 SLC25A34Q6PIV7 304 aa6.03□□□□□ -1.44
HERC1-212ENST00000561348 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
HERC1-212ENST00000561348 PPDPFQ9H3Y8 114 aa6.03□□□□□ -1.44
HERC1-212ENST00000561348 A0A087X002 238 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 LOC107984156A0A0G2JMH3 177 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 TRBV10-2A0A0K0K1G8 114 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 TIMM17BO60830 172 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 NDUFC2O95298 119 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 ARL17AQ8IVW1 177 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 LITAFQ99732 161 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
HERC1-212ENST00000561348 TRAV23DV6A0A075B6W5 121 aa6.01□□□□□ -1.45
HERC1-212ENST00000561348 COX8AP10176 69 aa6.01□□□□□ -1.45
HERC1-212ENST00000561348 SPANXCQ9NY87 97 aa6.01□□□□□ -1.45
HERC1-212ENST00000561348 HINT1P49773 126 aaPredicted RBP6□□□□□ -1.45
HERC1-212ENST00000561348 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
HERC1-212ENST00000561348 A6NDN8 102 aa5.99□□□□□ -1.45
HERC1-212ENST00000561348 B5MCH6 92 aa5.99□□□□□ -1.45
HERC1-212ENST00000561348 GAGE2AQ6NT46 116 aa5.99□□□□□ -1.45
HERC1-212ENST00000561348 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
HERC1-212ENST00000561348 ZNF706Q9Y5V0 76 aaPredicted RBP5.99□□□□□ -1.45
HERC1-212ENST00000561348 TNXBP22105 4242 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 DLEU1O43261 78 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 ZNF73O43830 326 aaPredicted RBP5.98□□□□□ -1.45
HERC1-212ENST00000561348 IGLV6-57P01721 117 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 SPRR1AP35321 89 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 COPS9Q8WXC6 57 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 SPRR4Q96PI1 79 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
HERC1-212ENST00000561348 PRR4Q16378 134 aa5.97□□□□□ -1.45
HERC1-212ENST00000561348 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
HERC1-212ENST00000561348 C3orf22Q8N5N4 141 aa5.97□□□□□ -1.45
HERC1-212ENST00000561348 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
HERC1-212ENST00000561348 KRTAP4-16G5E9R7 235 aaPredicted RBP5.96□□□□□ -1.46
HERC1-212ENST00000561348 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
HERC1-212ENST00000561348 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
HERC1-212ENST00000561348 BVES-AS1Q5T3Y7 98 aa5.96□□□□□ -1.46
HERC1-212ENST00000561348 Q6ZRX8 168 aa5.96□□□□□ -1.46
HERC1-212ENST00000561348 IGLV9-49A0A0B4J1Y8 123 aa5.95□□□□□ -1.46
HERC1-212ENST00000561348 IFITM1P13164 125 aa5.95□□□□□ -1.46
HERC1-212ENST00000561348 C2orf91Q6ZV80 131 aa5.95□□□□□ -1.46
HERC1-212ENST00000561348 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
HERC1-212ENST00000561348 Q9BRP9 147 aa5.95□□□□□ -1.46
HERC1-212ENST00000561348 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
HERC1-212ENST00000561348 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
HERC1-212ENST00000561348 Q6ZVH6 145 aa5.94□□□□□ -1.46
HERC1-212ENST00000561348 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
HERC1-212ENST00000561348 COX7BP24311 80 aa5.93□□□□□ -1.46
HERC1-212ENST00000561348 HSD52Q0P140 79 aa5.93□□□□□ -1.46
HERC1-212ENST00000561348 XP32Q5T750 250 aa5.93□□□□□ -1.46
HERC1-212ENST00000561348 HIST1H4GQ99525 98 aa5.93□□□□□ -1.46
HERC1-212ENST00000561348 HIGD1BQ9P298 99 aa5.93□□□□□ -1.46
HERC1-212ENST00000561348 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
HERC1-212ENST00000561348 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
HERC1-212ENST00000561348 DEFB105AQ8NG35 78 aa5.92□□□□□ -1.46
HERC1-212ENST00000561348 RETNLBQ9BQ08 111 aa5.92□□□□□ -1.46
HERC1-212ENST00000561348 MOBPQ13875 183 aa5.91□□□□□ -1.46
HERC1-212ENST00000561348 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
HERC1-212ENST00000561348 A4D1N5 150 aa5.9□□□□□ -1.46
HERC1-212ENST00000561348 TAX1BP3O14907 124 aa5.9□□□□□ -1.46
HERC1-212ENST00000561348 Q8NBF4 154 aa5.9□□□□□ -1.46
HERC1-212ENST00000561348 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
HERC1-212ENST00000561348 TAL2Q16559 108 aa5.89□□□□□ -1.47
HERC1-212ENST00000561348 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
HERC1-212ENST00000561348 H7C2G1 150 aa5.88□□□□□ -1.47
HERC1-212ENST00000561348 UBE2V1Q13404 147 aa5.88□□□□□ -1.47
HERC1-212ENST00000561348 SMIM11BQ8TCY0 68 aa5.88□□□□□ -1.47
HERC1-212ENST00000561348 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
HERC1-212ENST00000561348 VAMP3Q15836 100 aa5.87□□□□□ -1.47
HERC1-212ENST00000561348 A0A1B0GWB2 263 aa5.86□□□□□ -1.47
HERC1-212ENST00000561348 Q1RN00 199 aa5.86□□□□□ -1.47
HERC1-212ENST00000561348 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
HERC1-212ENST00000561348 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
HERC1-212ENST00000561348 SLC25A20O43772 301 aa5.85□□□□□ -1.47
HERC1-212ENST00000561348 SPAG11AQ6PDA7 123 aa5.85□□□□□ -1.47
HERC1-212ENST00000561348 HRCT1Q6UXD1 115 aa5.85□□□□□ -1.47
HERC1-212ENST00000561348 CEND1Q8N111 149 aa5.85□□□□□ -1.47
HERC1-212ENST00000561348 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms