RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
SEMA4B-215ENST00000560089 VWFP04275 2813 aa12.9□□□□□ -0.35
SEMA4B-215ENST00000560089 ZCCHC13Q8WW36 166 aaKnown RBP12.89□□□□□ -0.35
SEMA4B-215ENST00000560089 DIRC1Q969H9 104 aa12.89□□□□□ -0.35
SEMA4B-215ENST00000560089 ATRQ13535 2644 aa12.88□□□□□ -0.35
SEMA4B-215ENST00000560089 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
SEMA4B-215ENST00000560089 KLK12Q9UKR0 248 aa12.86□□□□□ -0.35
SEMA4B-215ENST00000560089 CLPSL2Q6UWE3 100 aa12.86□□□□□ -0.35
SEMA4B-215ENST00000560089 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
SEMA4B-215ENST00000560089 HCG22E2RYF7 251 aa12.85□□□□□ -0.35
SEMA4B-215ENST00000560089 IGLV6-57P01721 117 aa12.85□□□□□ -0.35
SEMA4B-215ENST00000560089 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
SEMA4B-215ENST00000560089 C3orf84H3BNL1 204 aa12.84□□□□□ -0.35
SEMA4B-215ENST00000560089 ZNF73O43830 326 aaPredicted RBP12.84□□□□□ -0.35
SEMA4B-215ENST00000560089 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
SEMA4B-215ENST00000560089 ATP11AUNQ6ZP68 121 aa12.84□□□□□ -0.35
SEMA4B-215ENST00000560089 KIAA0087Q14695 138 aa12.83□□□□□ -0.36
SEMA4B-215ENST00000560089 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
SEMA4B-215ENST00000560089 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
SEMA4B-215ENST00000560089 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
SEMA4B-215ENST00000560089 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.81□□□□□ -0.36
SEMA4B-215ENST00000560089 CCL24O00175 119 aa12.8□□□□□ -0.36
SEMA4B-215ENST00000560089 DEFB114Q30KQ6 69 aa12.8□□□□□ -0.36
SEMA4B-215ENST00000560089 MAST4O15021 2626 aa12.8□□□□□ -0.36
SEMA4B-215ENST00000560089 A6NN06 94 aa12.8□□□□□ -0.36
SEMA4B-215ENST00000560089 PRR15LQ9BU68 103 aa12.8□□□□□ -0.36
SEMA4B-215ENST00000560089 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
SEMA4B-215ENST00000560089 ETDCA0A1B0GVM5 59 aa12.79□□□□□ -0.36
SEMA4B-215ENST00000560089 LIMD2Q9BT23 127 aa12.78□□□□□ -0.36
SEMA4B-215ENST00000560089 TRRAPQ9Y4A5 3859 aa12.78□□□□□ -0.36
SEMA4B-215ENST00000560089 LCA10Q71F78 164 aa12.77□□□□□ -0.37
SEMA4B-215ENST00000560089 FBN1P35555 2871 aaKnown RBP12.77□□□□□ -0.37
SEMA4B-215ENST00000560089 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
SEMA4B-215ENST00000560089 Q8N9P0 234 aaPredicted RBP12.75□□□□□ -0.37
SEMA4B-215ENST00000560089 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
SEMA4B-215ENST00000560089 H3BS24 57 aa12.74□□□□□ -0.37
SEMA4B-215ENST00000560089 A6NED7 52 aa12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 C8orf87E5RJ46 101 aa12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 NDUFB1O75438 58 aa12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 ELOF1P60002 83 aaKnown RBP12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 C7orf65Q6ZTY9 151 aa12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 B9D2Q9BPU9 175 aa12.73□□□□□ -0.37
SEMA4B-215ENST00000560089 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
SEMA4B-215ENST00000560089 UNQ6190/PRO20217Q6UXQ8 127 aa12.69□□□□□ -0.38
SEMA4B-215ENST00000560089 STAB1Q9NY15 2570 aa12.68□□□□□ -0.38
SEMA4B-215ENST00000560089 A0A1B0GUV1 79 aa12.67□□□□□ -0.38
SEMA4B-215ENST00000560089 CHCHD10Q8WYQ3 142 aaPredicted RBP12.67□□□□□ -0.38
SEMA4B-215ENST00000560089 LINC00208Q96KT6 92 aa12.66□□□□□ -0.38
SEMA4B-215ENST00000560089 Q75L30 129 aa12.66□□□□□ -0.38
SEMA4B-215ENST00000560089 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
SEMA4B-215ENST00000560089 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
SEMA4B-215ENST00000560089 C16orf74Q96GX8 76 aa12.63□□□□□ -0.39
SEMA4B-215ENST00000560089 XAGE1AQ9HD64 81 aa12.62□□□□□ -0.39
SEMA4B-215ENST00000560089 SPAG11BQ08648 103 aa12.61□□□□□ -0.39
SEMA4B-215ENST00000560089 CDC42SE1Q9NRR8 79 aa12.61□□□□□ -0.39
SEMA4B-215ENST00000560089 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
SEMA4B-215ENST00000560089 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
SEMA4B-215ENST00000560089 K7EQZ3 153 aa12.59□□□□□ -0.39
SEMA4B-215ENST00000560089 MP68P56378 58 aa12.59□□□□□ -0.39
SEMA4B-215ENST00000560089 NBEAL2Q6ZNJ1 2754 aa12.58□□□□□ -0.4
SEMA4B-215ENST00000560089 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
SEMA4B-215ENST00000560089 KPRPQ5T749 579 aaPredicted RBP12.58□□□□□ -0.4
SEMA4B-215ENST00000560089 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 GYPEP15421 78 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 DSCR10P59022 87 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 KRTAP24-1Q3LI83 254 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 DEFB105AQ8NG35 78 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 A0A096LPF7 62 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 Q9BRP9 147 aa12.57□□□□□ -0.4
SEMA4B-215ENST00000560089 LOC101927531A0A1B0GV80 90 aa12.56□□□□□ -0.4
SEMA4B-215ENST00000560089 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-215ENST00000560089 MOBPQ13875 183 aa12.56□□□□□ -0.4
SEMA4B-215ENST00000560089 IGLV1-51P01701 117 aa12.55□□□□□ -0.4
SEMA4B-215ENST00000560089 REG3AQ06141 175 aa12.55□□□□□ -0.4
SEMA4B-215ENST00000560089 SPANXA2-OT1Q8N9U9 137 aa12.53□□□□□ -0.4
SEMA4B-215ENST00000560089 NKAPP1Q8N9T2 125 aa12.52□□□□□ -0.41
SEMA4B-215ENST00000560089 A0A1W2PNM2 257 aa12.52□□□□□ -0.41
SEMA4B-215ENST00000560089 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.41
SEMA4B-215ENST00000560089 A0A1B0GW54 56 aa12.51□□□□□ -0.41
SEMA4B-215ENST00000560089 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
SEMA4B-215ENST00000560089 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
SEMA4B-215ENST00000560089 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
SEMA4B-215ENST00000560089 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-215ENST00000560089 DEFB116Q30KQ4 102 aa12.48□□□□□ -0.41
SEMA4B-215ENST00000560089 Q8N377 158 aa12.48□□□□□ -0.41
SEMA4B-215ENST00000560089 C6orf48Q9UBA6 75 aa12.47□□□□□ -0.41
SEMA4B-215ENST00000560089 VPREB1P12018 145 aa12.47□□□□□ -0.41
SEMA4B-215ENST00000560089 C19orf73Q9NVV2 129 aa12.47□□□□□ -0.41
SEMA4B-215ENST00000560089 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
SEMA4B-215ENST00000560089 WFDC13Q8IUB5 93 aa12.45□□□□□ -0.42
SEMA4B-215ENST00000560089 GVQW2A0A096LPI5 108 aaPredicted RBP12.44□□□□□ -0.42
SEMA4B-215ENST00000560089 C1orf137Q5JT78 98 aa12.44□□□□□ -0.42
SEMA4B-215ENST00000560089 Q8NBF4 154 aa12.43□□□□□ -0.42
SEMA4B-215ENST00000560089 COA5Q86WW8 74 aa12.43□□□□□ -0.42
SEMA4B-215ENST00000560089 OXLD1Q5BKU9 147 aa12.4□□□□□ -0.42
SEMA4B-215ENST00000560089 H0Y9P7 68 aa12.4□□□□□ -0.42
SEMA4B-215ENST00000560089 NOTCH1P46531 2555 aa12.4□□□□□ -0.43
SEMA4B-215ENST00000560089 LINC00313P59037 77 aa12.39□□□□□ -0.43
SEMA4B-215ENST00000560089 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
SEMA4B-215ENST00000560089 PRAC1Q96KF2 57 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 281.4 ms