RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 C9orf153Q5TBE3 101 aa13.27□□□□□ -0.29
PBX1-217ENST00000559578 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
PBX1-217ENST00000559578 IGKCP01834 107 aa13.26□□□□□ -0.29
PBX1-217ENST00000559578 LCE2DQ5TA82 110 aaPredicted RBP13.26□□□□□ -0.29
PBX1-217ENST00000559578 NDUFC2O95298 119 aa13.25□□□□□ -0.29
PBX1-217ENST00000559578 IGLV6-57P01721 117 aa13.25□□□□□ -0.29
PBX1-217ENST00000559578 NPC2P61916 151 aa13.25□□□□□ -0.29
PBX1-217ENST00000559578 TRAV23DV6A0A075B6W5 121 aa13.24□□□□□ -0.29
PBX1-217ENST00000559578 SOSTDC1Q6X4U4 206 aa13.21□□□□□ -0.29
PBX1-217ENST00000559578 ZNF73O43830 326 aaPredicted RBP13.19□□□□□ -0.3
PBX1-217ENST00000559578 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
PBX1-217ENST00000559578 A0A0J9YXY3 114 aa13.18□□□□□ -0.3
PBX1-217ENST00000559578 ADAMTSL4-AS1Q5T5F5 129 aa13.18□□□□□ -0.3
PBX1-217ENST00000559578 ST20-AS1Q8NBB2 130 aa13.17□□□□□ -0.3
PBX1-217ENST00000559578 C5orf52A6NGY3 159 aa13.15□□□□□ -0.3
PBX1-217ENST00000559578 HINT1P49773 126 aaPredicted RBP13.15□□□□□ -0.3
PBX1-217ENST00000559578 CBY1Q9Y3M2 126 aa13.14□□□□□ -0.31
PBX1-217ENST00000559578 E9PLD3 99 aa13.13□□□□□ -0.31
PBX1-217ENST00000559578 LIMD2Q9BT23 127 aa13.11□□□□□ -0.31
PBX1-217ENST00000559578 LCE2CQ5TA81 110 aa13.1□□□□□ -0.31
PBX1-217ENST00000559578 SLC25A34Q6PIV7 304 aa13.1□□□□□ -0.31
PBX1-217ENST00000559578 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
PBX1-217ENST00000559578 CRCT1Q9UGL9 99 aa13.09□□□□□ -0.31
PBX1-217ENST00000559578 COLCA2A8K830 154 aa13.08□□□□□ -0.32
PBX1-217ENST00000559578 FSIP2Q5CZC0 6907 aa13.08□□□□□ -0.32
PBX1-217ENST00000559578 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
PBX1-217ENST00000559578 LINC00308Q8TCZ7 52 aa13.07□□□□□ -0.32
PBX1-217ENST00000559578 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
PBX1-217ENST00000559578 SPRR1BP22528 89 aa13.06□□□□□ -0.32
PBX1-217ENST00000559578 PCOTHQ58A44 107 aa13.06□□□□□ -0.32
PBX1-217ENST00000559578 LITAFQ99732 161 aa13.05□□□□□ -0.32
PBX1-217ENST00000559578 DHRS4-AS1Q9P1J3 65 aa13.05□□□□□ -0.32
PBX1-217ENST00000559578 IGLV8-61A0A075B6I0 122 aa13.04□□□□□ -0.32
PBX1-217ENST00000559578 SYS1-DBNDD2H3BUS1 97 aa13.04□□□□□ -0.32
PBX1-217ENST00000559578 LAMTOR3Q9UHA4 124 aa13.04□□□□□ -0.32
PBX1-217ENST00000559578 KRTAP19-2Q3LHN2 52 aa13.03□□□□□ -0.32
PBX1-217ENST00000559578 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
PBX1-217ENST00000559578 C9orf92A6NGG3 77 aa13.02□□□□□ -0.33
PBX1-217ENST00000559578 TIMM17BO60830 172 aa13.01□□□□□ -0.33
PBX1-217ENST00000559578 MT1HP80294 61 aa13□□□□□ -0.33
PBX1-217ENST00000559578 ZNF815PA8K554 130 aa12.99□□□□□ -0.33
PBX1-217ENST00000559578 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
PBX1-217ENST00000559578 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
PBX1-217ENST00000559578 COX7BP24311 80 aa12.97□□□□□ -0.33
PBX1-217ENST00000559578 LINC01545Q5VT33 79 aa12.97□□□□□ -0.33
PBX1-217ENST00000559578 TTTY13Q9BZ97 58 aa12.97□□□□□ -0.33
PBX1-217ENST00000559578 HIST1H2BKO60814 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BJP06899 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BOP23527 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BBP33778 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BDP58876 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 ELOF1P60002 83 aaKnown RBP12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BCP62807 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 CD164Q04900 197 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST2H2BEQ16778 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 C6orf99Q4VX62 202 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BHQ93079 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BNQ99877 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 HIST1H2BMQ99879 126 aa12.95□□□□□ -0.34
PBX1-217ENST00000559578 TAL2Q16559 108 aa12.94□□□□□ -0.34
PBX1-217ENST00000559578 Q1RN00 199 aa12.94□□□□□ -0.34
PBX1-217ENST00000559578 PET117Q6UWS5 81 aa12.94□□□□□ -0.34
PBX1-217ENST00000559578 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
PBX1-217ENST00000559578 DEFB105AQ8NG35 78 aa12.94□□□□□ -0.34
PBX1-217ENST00000559578 PRO1933Q9H354 126 aa12.93□□□□□ -0.34
PBX1-217ENST00000559578 TEX49A0A1B0GTD5 131 aa12.89□□□□□ -0.35
PBX1-217ENST00000559578 H7C2G1 150 aa12.89□□□□□ -0.35
PBX1-217ENST00000559578 C3orf79P0CE67 100 aa12.87□□□□□ -0.35
PBX1-217ENST00000559578 Q5XG85 94 aa12.86□□□□□ -0.35
PBX1-217ENST00000559578 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
PBX1-217ENST00000559578 AKR1D1P51857 326 aa12.85□□□□□ -0.35
PBX1-217ENST00000559578 TRBV7-6A0A0J9YX20 115 aa12.83□□□□□ -0.36
PBX1-217ENST00000559578 KRTDAPP60985 99 aa12.83□□□□□ -0.36
PBX1-217ENST00000559578 LORP23490 312 aaPredicted RBP12.82□□□□□ -0.36
PBX1-217ENST00000559578 A0A1B0GWB2 263 aa12.81□□□□□ -0.36
PBX1-217ENST00000559578 A6NDN8 102 aa12.81□□□□□ -0.36
PBX1-217ENST00000559578 KRTAP10-6P60371 365 aaPredicted RBP12.81□□□□□ -0.36
PBX1-217ENST00000559578 C1orf195Q5TG92 126 aa12.81□□□□□ -0.36
PBX1-217ENST00000559578 SMIM29Q86T20 159 aa12.81□□□□□ -0.36
PBX1-217ENST00000559578 M0R2T5 61 aa12.8□□□□□ -0.36
PBX1-217ENST00000559578 COPS9Q8WXC6 57 aa12.8□□□□□ -0.36
PBX1-217ENST00000559578 A0A0G2JQZ4 141 aa12.78□□□□□ -0.36
PBX1-217ENST00000559578 RPL37P61927 97 aaKnown RBP12.78□□□□□ -0.36
PBX1-217ENST00000559578 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
PBX1-217ENST00000559578 IFITM1P13164 125 aa12.77□□□□□ -0.37
PBX1-217ENST00000559578 IGLV5-48A0A075B6I7 105 aa12.76□□□□□ -0.37
PBX1-217ENST00000559578 COX6B2Q6YFQ2 88 aa12.76□□□□□ -0.37
PBX1-217ENST00000559578 MUSTN1Q8IVN3 82 aa12.75□□□□□ -0.37
PBX1-217ENST00000559578 C20orf202A1L168 122 aa12.74□□□□□ -0.37
PBX1-217ENST00000559578 ATOH7Q8N100 152 aa12.74□□□□□ -0.37
PBX1-217ENST00000559578 Q6ZVH6 145 aa12.73□□□□□ -0.37
PBX1-217ENST00000559578 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
PBX1-217ENST00000559578 PCP2Q8IVA1 136 aa12.71□□□□□ -0.37
PBX1-217ENST00000559578 A4D1N5 150 aa12.7□□□□□ -0.38
PBX1-217ENST00000559578 TCL1BO95988 128 aa12.7□□□□□ -0.38
PBX1-217ENST00000559578 NHP2Q9NX24 153 aaKnown RBP12.69□□□□□ -0.38
PBX1-217ENST00000559578 SMIM11BQ8TCY0 68 aa12.68□□□□□ -0.38
PBX1-217ENST00000559578 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
PBX1-217ENST00000559578 F8WEM9 126 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms