RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 UBE2AP49459 152 aa7.61□□□□□ -1.19
GABPB1-208ENST00000558970 TRAV23DV6A0A075B6W5 121 aa7.6□□□□□ -1.19
GABPB1-208ENST00000558970 IGLV6-57P01721 117 aa7.6□□□□□ -1.19
GABPB1-208ENST00000558970 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.19
GABPB1-208ENST00000558970 ETDCA0A1B0GVM5 59 aa7.59□□□□□ -1.19
GABPB1-208ENST00000558970 CEND1Q8N111 149 aa7.59□□□□□ -1.19
GABPB1-208ENST00000558970 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
GABPB1-208ENST00000558970 PPDPFQ9H3Y8 114 aa7.58□□□□□ -1.2
GABPB1-208ENST00000558970 FXYD2P54710 66 aa7.57□□□□□ -1.2
GABPB1-208ENST00000558970 HSD52Q0P140 79 aa7.57□□□□□ -1.2
GABPB1-208ENST00000558970 TAL2Q16559 108 aa7.57□□□□□ -1.2
GABPB1-208ENST00000558970 TRAV13-2A0A0B4J235 113 aa7.56□□□□□ -1.2
GABPB1-208ENST00000558970 H7C2G1 150 aa7.56□□□□□ -1.2
GABPB1-208ENST00000558970 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-208ENST00000558970 ZNF861PO60384 105 aa7.56□□□□□ -1.2
GABPB1-208ENST00000558970 RPL13AP40429 203 aaKnown RBP7.56□□□□□ -1.2
GABPB1-208ENST00000558970 RPL28P46779 137 aaKnown RBP7.56□□□□□ -1.2
GABPB1-208ENST00000558970 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
GABPB1-208ENST00000558970 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
GABPB1-208ENST00000558970 RAB37Q96AX2 223 aa7.55□□□□□ -1.2
GABPB1-208ENST00000558970 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
GABPB1-208ENST00000558970 CFC1P0CG37 223 aa7.54□□□□□ -1.2
GABPB1-208ENST00000558970 SPRR1AP35321 89 aa7.54□□□□□ -1.2
GABPB1-208ENST00000558970 C6orf99Q4VX62 202 aa7.54□□□□□ -1.2
GABPB1-208ENST00000558970 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
GABPB1-208ENST00000558970 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
GABPB1-208ENST00000558970 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 A6NJY4 79 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 B5MCH6 92 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
GABPB1-208ENST00000558970 H0Y9J4 135 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
GABPB1-208ENST00000558970 K7ERJ3 54 aa7.52□□□□□ -1.21
GABPB1-208ENST00000558970 HINT1P49773 126 aaPredicted RBP7.52□□□□□ -1.21
GABPB1-208ENST00000558970 Q1RN00 199 aa7.52□□□□□ -1.21
GABPB1-208ENST00000558970 CBY1Q9Y3M2 126 aa7.52□□□□□ -1.21
GABPB1-208ENST00000558970 COL5A1-AS1Q5SY13 56 aa7.51□□□□□ -1.21
GABPB1-208ENST00000558970 Q6ZRX8 168 aa7.51□□□□□ -1.21
GABPB1-208ENST00000558970 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
GABPB1-208ENST00000558970 COX7BP24311 80 aa7.5□□□□□ -1.21
GABPB1-208ENST00000558970 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
GABPB1-208ENST00000558970 Q9BRP9 147 aa7.5□□□□□ -1.21
GABPB1-208ENST00000558970 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
GABPB1-208ENST00000558970 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
GABPB1-208ENST00000558970 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
GABPB1-208ENST00000558970 BATFQ16520 125 aa7.48□□□□□ -1.21
GABPB1-208ENST00000558970 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
GABPB1-208ENST00000558970 PRO1854Q9UHT4 67 aa7.48□□□□□ -1.21
GABPB1-208ENST00000558970 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
GABPB1-208ENST00000558970 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
GABPB1-208ENST00000558970 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
GABPB1-208ENST00000558970 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
GABPB1-208ENST00000558970 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
GABPB1-208ENST00000558970 J3QL48 77 aa7.44□□□□□ -1.22
GABPB1-208ENST00000558970 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
GABPB1-208ENST00000558970 VAMP3Q15836 100 aa7.44□□□□□ -1.22
GABPB1-208ENST00000558970 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
GABPB1-208ENST00000558970 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
GABPB1-208ENST00000558970 KRTAP29-1A8MX34 341 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-208ENST00000558970 GAGE2AQ6NT46 116 aa7.43□□□□□ -1.22
GABPB1-208ENST00000558970 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
GABPB1-208ENST00000558970 DHRS4-AS1Q9P1J3 65 aa7.43□□□□□ -1.22
GABPB1-208ENST00000558970 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
GABPB1-208ENST00000558970 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
GABPB1-208ENST00000558970 TSPAN13O95857 204 aa7.42□□□□□ -1.22
GABPB1-208ENST00000558970 PSMB2P49721 201 aa7.42□□□□□ -1.22
GABPB1-208ENST00000558970 A0A1B0GV90 55 aa7.41□□□□□ -1.22
GABPB1-208ENST00000558970 TRIAP1O43715 76 aa7.41□□□□□ -1.22
GABPB1-208ENST00000558970 OXTP01178 125 aa7.41□□□□□ -1.22
GABPB1-208ENST00000558970 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
GABPB1-208ENST00000558970 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
GABPB1-208ENST00000558970 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-208ENST00000558970 A0A087X002 238 aa7.4□□□□□ -1.22
GABPB1-208ENST00000558970 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
GABPB1-208ENST00000558970 SLC25A20O43772 301 aa7.39□□□□□ -1.23
GABPB1-208ENST00000558970 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
GABPB1-208ENST00000558970 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
GABPB1-208ENST00000558970 FAM218AQ96MZ4 157 aa7.38□□□□□ -1.23
GABPB1-208ENST00000558970 hADV29S1A0JD25 119 aa7.37□□□□□ -1.23
GABPB1-208ENST00000558970 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
GABPB1-208ENST00000558970 CRYGAP11844 174 aa7.37□□□□□ -1.23
GABPB1-208ENST00000558970 C3orf22Q8N5N4 141 aa7.37□□□□□ -1.23
GABPB1-208ENST00000558970 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
GABPB1-208ENST00000558970 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
GABPB1-208ENST00000558970 Q6ZQY7 126 aa7.36□□□□□ -1.23
GABPB1-208ENST00000558970 SCGB1C2P0DMR2 95 aa7.35□□□□□ -1.23
GABPB1-208ENST00000558970 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
GABPB1-208ENST00000558970 H0YGX0 51 aa7.34□□□□□ -1.23
GABPB1-208ENST00000558970 COX6CP09669 75 aa7.34□□□□□ -1.23
GABPB1-208ENST00000558970 FAM229BQ4G0N7 80 aa7.34□□□□□ -1.23
GABPB1-208ENST00000558970 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
GABPB1-208ENST00000558970 LINC00483Q53H64 154 aa7.33□□□□□ -1.24
GABPB1-208ENST00000558970 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
GABPB1-208ENST00000558970 TNXBP22105 4242 aa7.33□□□□□ -1.24
GABPB1-208ENST00000558970 MOBPQ13875 183 aa7.32□□□□□ -1.24
GABPB1-208ENST00000558970 TEX49A0A1B0GTD5 131 aa7.31□□□□□ -1.24
GABPB1-208ENST00000558970 H3BUT2 72 aa7.31□□□□□ -1.24
GABPB1-208ENST00000558970 SNCGO76070 127 aa7.31□□□□□ -1.24
GABPB1-208ENST00000558970 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms